• Title/Summary/Keyword: A2 mating type

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Discovery and Functional Study of a Novel Genomic Locus Homologous to Bα-Mating-Type Sublocus of Lentinula edodes

  • Lee, Yun Jin;Kim, Eunbi;Eom, Hyerang;Yang, Seong-Hyeok;Choi, Yeon Jae;Ro, Hyeon-Su
    • Mycobiology
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    • v.49 no.6
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    • pp.582-588
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    • 2021
  • The interaction of mating pheromone and pheromone receptor from the B mating-type locus is the first step in the activation of the mushroom mating signal transduction pathway. The B mating-type locus of Lentinula edodes is composed of Bα and Bβ subloci, each of which contains genes for mating pheromone and pheromone receptor. Allelic variations in both subloci generate multiple B mating-types through which L. edodes maintains genetic diversity. In addition to the B mating-type locus, our genomic sequence analysis revealed the presence of a novel chromosomal locus 43.3 kb away from the B mating-type locus, containing genes for a pair of mating pheromones (PHBN1 and PHBN2) and a pheromone receptor (RCBN). The new locus (Bα-N) was homologous to the Bα sublocus, but unlike the multiallelic Bα sublocus, it was highly conserved across the wild and cultivated strains. The interactions of RcbN with various mating pheromones from the B and Bα-N mating-type loci were investigated using yeast model that replaced endogenous yeast mating pheromone receptor STE2 with RCBN. The yeast mating signal transduction pathway was only activated in the presence of PHBN1 or PHBN2 in the RcbN producing yeast, indicating that RcbN interacts with self-pheromones (PHBN1 and PHBN2), not with pheromones from the B mating-type locus. The biological function of the Bα-N locus was suggested to control the expression of A mating-type genes, as evidenced by the increased expression of two A-genes HD1 and HD2 upon the treatment of synthetic PHBN1 and PHBN2 peptides to the monokaryotic strain of L. edodes.

Genetic DNA Marker for A2 mating type in Phytophthora infestans

  • Kim, Kwon-Jong;Lee, Youn-Su
    • Journal of Microbiology
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    • v.40 no.4
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    • pp.254-259
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    • 2002
  • The Phytophthora infestans requires two mating types for sexual reproduction. Amplified fragment length polymorphism (AFLP) was used to specifically detect different mating types of P. infestans. The AFLP primers E+AA (5'-GACTGCGTACCAATTCAA-3') and M+CAA (5'-GATGAGTCCTGAG-TAAC AA-3') detected a fragment that is specific in the A2 mating type of P. infestans. This fragment was cloned and sequenced. Based on the sequence data, PHYB-1 and PHYB-2 primer were designed to detect the A2 mating type of P. infestans. A single 347 bp segment was observed in the A2 mating type of P. infestans, but not in the A1 mating type of P. infestans or other Phytophthora spp. Identification of mating type was performed with phenotype (sexual reproduction) and genotype (CAPs marker) methods. Two factors, the annealing temperature and template DNA quantity, were investigated to determine the optimal conditions. Using mating type-specific primers, a unique band was obtained within annealing temperatures of 57$^{\circ}C$-62$^{\circ}C$ and DNA levels of 10pg-100 ng (data not shown).

Mating Types of Phytophthora capsici Leonian from Red-pepper ( Capsicum annuum L.) in Korea (고추역병균(疫病菌)(Phytophthora capsici Leonian)의 배우자형(配偶子型) 분포(分布))

  • Kim, Jeong-Soo;Do, Tae-Hong;Cho, Eui-Kyoo;Lee, Min-Woong
    • The Korean Journal of Mycology
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    • v.16 no.2
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    • pp.60-63
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    • 1988
  • Each of 103 isolates of Phytophthora capsici was obtained from diseased red pepper plants randomly belonged to either the mating type $A_1$ or the mating type $A_2$. Fifty four isolates were classified as mating type $A_1$, and 49 isolates were classified as mating type $A_2$.Oospores were formed in each combination of isolates between $A_1$ or $A_2$ on 5% V-8 juice agar except one combination.

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SCAR Marker Linked with A1 Mating Type Locus in Phytophthora infestans

  • Zhang Xuan-Zhe;Seo Hyo-Won;Ahn Won-Gyeong;Kim Byung-Sup
    • Journal of Microbiology and Biotechnology
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    • v.16 no.5
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    • pp.724-730
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    • 2006
  • A sequence characterized amplified region (SCAR) marker, which was tightly linked with the A1 mating type locus in Phytophthora infestans, was developed. During the random amplified polymorphic DNA-based phylogenic studies of 33 isolates of P infestans collected from year 2002 to 2004, we found an A1 mating type-specific DNA fragment. This 573-bp DNA fragment was generated only in the genomic DNA of the A1 mating types, when OPC-5 primer was used. Based on the specific DNA sequence, we designed the primer sets for generating the A1 mating type-specific 569-bp DNA fragment. When 33 genomic DNAs of P. infestans were subjected to PCR amplification using different primer combinations, the A1 mating type-specific DNA was amplified, when LB-1F and LB-2R primers were used. The specific 569-bp DNA fragment was generated only from all 18 A1 strains, but not from 15 A2 mating type strains. These results corresponded to the mating type discriminating bioassay of 33 isolates of P. infestans. Therefore, the primer combination of LB-1F/LB2R was chosen as a SCAR marker. Overall, this study indicates that the SCAR marker could be developed into a useful tool for mating type determination of P. infestans.

Studies on the mating type substance in Paramecium aurelia (짚신벌레의 성물질 합성에 대한 연구)

  • 강현삼
    • Korean Journal of Microbiology
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    • v.13 no.3
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    • pp.123-137
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    • 1975
  • Sexual reproduction of paramecia have been accomplished through conjugation between individuals which have opposite mating type substances on their cilia when they were starved. Using selfing clone in which mating takes place, I examined whether a mating type change in indicidual cells required new protein and new mRNA synthesis or not and also shether there is a precursor relationship between both of the complementary mating type substances in their synthetic pathway. I found that 1. Mating type change needs new protein(s) and new mRNA synthesis. 2. Mating type substances are synthesized sequentially from mating type XIII to XIV 3. There might be a common precursor pool from which the mating type XIII substnace is synthesized and then complementary mating type XIV is fromed by addition of small group to the mating type XIII substance.

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Diversity and distribution of mating types in Lentinula edodes and mating type preference in domesticated strains

  • Ha, Byeong-Suk;Ro, Hyeon-Su
    • 한국균학회소식:학술대회논문집
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    • 2018.05a
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    • pp.37-37
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    • 2018
  • Mating type of Lentinula edodes is determined by two unlinked genetic loci, A and B. To better understand mating behavior of L. edodes, we investigated variations in mating type genes in129 dikaryotic strains collected from East Asia. Through sequence analysis of A locus, we discovered that hypervariable region spanning N-term of HD2-intergenic region-N-term of HD1 could represent A mating type. Mating and hypervariable region analyses revealed 70 unique A mating types: 27 from 98 cultivated strains, 53 from 31 wild strains, and 10 commonly found. It was also revealed that only a few A mating type alleles such as A1, A4, A5, and A7 were prevalent in cultivated strains. Contrarily, A mating type in wild strains was highly diverse: 23 unique A alleles were discovered in small mountainous area in Korean peninsula, suggesting rapid evolution of A mating type in nature. The B locus was assessed by allelic variations in pheromone (PHB) and pheromone receptor (RCB) pairs which constituted subloci Ba and Bb. Sequence analyses and mating assay revealed 5 alleles of RCB1 with 9 associated PHBs in Ba sublocus and 3 alleles of RCB2 with 5 associated PHBs in Bb sublocus. Each RCB was primarily associated with two PHBs. Each PHB-RCB pair was always discovered as a distinct unit. This allowed us to propose 15 B mating types via combinations of five Ba and three Bb subloci. Further investigation on 129 strains confirmed that the B locus, unlike the A locus, was indeed restricted to 15 mating types. Thus, the total number of mating types became 1,050 in L. edodes through a combination of 70 A and 15 B. This number will further increase because of rapid diversification of A mating type. Our findings provide a comprehensive and practical knowledge on mating behaviors of L. edodes.

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Analysis of Mating System in Lentinula edodes and Development of Mating Type-Specific Markers

  • Ha, Byung-Suk;Kim, Sinil;Ro, Hyeon-Su
    • 한국균학회소식:학술대회논문집
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    • 2014.10a
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    • pp.42-42
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    • 2014
  • Mating of tetrapolar mushrooms is regulated by to chromosomal loci, A and B. A locus contains A gene that expresses a homeodomain protein whereas B locus contains multiple pheromones and receptor genes. In order to characterize the mating loci in Korean cultivated strains of Lentinula edodes, one hundred monokaryotic myclelia were isolated from the basidiospores of cultivated strains, including Cham-A-Ram, Sanjo701, and Sanjo707. Both mating loci were amplified using primer sets targeting conserved sequence regions for homeodomain (HD), pheromone, and receptor genes. Subsequent sequence analysis revealed that the Korean strains contained significant variations in the homeodomain of A locus, even within the same A1 or A2 mating type. Similarly, B locus was also highly diversified in the sequences of pheromones and receptors as well as gene organization. These results enabled us to design mating type-specific probes which can distinguish mating type of each strain. The specificity was confirmed by between intra- and inter-strain mating experiment.

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Phylogenetic Analysis of Phaeosphaeria Species Using Mating Type Genes and Distribution of Mating Types in Iran

  • Ghaderi, Fariba;Habibi, Azadeh;Sharifnabi, Bahram
    • The Plant Pathology Journal
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    • v.38 no.2
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    • pp.78-89
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    • 2022
  • Phaeosphaeria species are pathogenic on wheat, barley and a wide range of wild grasses. To analyze mating type loci of the Phaeosphaeria species and investigate mating type distribution in Iran, we sequenced mating type loci of 273 Phaeosphaeria isolates including 67 isolates obtained from symptomatic leaves and ears of wheat, barley, and wild grasses from two wheat growing region in Iran as well as 206 isolates from our collection from other regions in Iran which were isolated in our previous studies. Mating type genes phylogeny was successfully used to determine the species identity and relationships among isolates within the Phaeosphaeria spp. complex. In this study, we reported seven new host records for Phaeosphaeria species and the Phaeosphaeria avenaria f. sp. tritici 3 group was first reported from Iran in this study. Mating type distribution among Phaeosphaeria species was determined. Both mating types were present in all sampling regions from Iran. We observed skewed distribution of mating types in one region (Kohgiluyeh va Boyer-Ahmad) and equal distribution in the other region (Bushehr). However, when considering our entire dataset of 273 Iranian Phaeosphaeria isolates, the ratio of mating types was not deviated significantly from 1:1 suggesting possibilities for isolates of opposite mating type to interact and reproduce sexually, although the sexual cycle may infrequently occur in some regions especially when the climatic conditions are unfavorable for teleomorph development.

Distribution and Alteration of Mating Type of Phytophthora capsici Population from Red Pepper in Korea (국내 고추역병균 Phytophthora capsici 집단의 교배형 분포 및 변화)

  • Song, Jeong-Young;Yoo, Sung-Joon;Kim, Hong-Gi
    • The Korean Journal of Mycology
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    • v.30 no.2
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    • pp.152-156
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    • 2002
  • Distribution and alteration of mating type of Korean population for Phytophthora capsici were monitored from 1995 to 1998. Total 973 isolates collected from 75 pepper fields throughout the country were divided into A1 mating type 573 isolates and A2 mating type 400 isolates. Both mating types were founded in all provinces examined, but the distribution patterns differed between the fields, The single mating type of A1 or A2 isolates was found in some fields, whereas various combinations of both mating types were in all years and provinces surveyed. Ratios of A1 and A2 were varied with years and fields. However, only single mating type either A1 or A2 was detected in some fields. While, in another field located in Gongju, only A2 isolates were detected in 1995 and 1997, but A1 isolates were appeared in 1998. Varied ratios and alterations of A1 and A2 mating type in fields indicate a potential sexual recombination of the fungus, which may cause genetic diversity.

Changes in Frequencies and Distribution of A2 Mating Type and Metalaxyl-Resistant Isolates of Phytophthora infestans in Korea (우라나라 감자 역병균 A2 교배형 및 Metalaxyl 저항성균의 빈도 및 분포의 변화)

  • ;;W. E. Fry
    • Korean Journal Plant Pathology
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    • v.10 no.2
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    • pp.92-98
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    • 1994
  • Phytophthora infestans populations collected from various geographical locations of Korea in 1991 and 1993 were analyzed for mating types and responses to metalaxyl. Both A1 and A2 mating type isolates were detected in 1991. The majority of the isolates were A2 mating type, but no A1 mating type was detected in 1993. About 40% of the isolates collected in 1991 were resistant to metalaxyl, and the distribution of metalaxyl-resistant isolates of P. infestans was strongly associated with their geographic origins in Korea. Metalaxyl-resistant isolates with EC50 values > 50$\mu\textrm{g}$/ml were collected from the northern provinces of Kangwon, Kyungbuk, and Chonbuk, but not from the southern provinces of Kyungnam, Chonnam, and Jeju in 1991. The drastic increase in the degree of quantitative resistance to metalaxyl was detected among the isolates from the southern provinces during 1991~1993. More than 50% of the isolates collected from the southern provinces of Kyungnam and Chonnam in 1993 had EC50 values >50$\mu\textrm{g}$/ml. The province of Kangwon had isolates with the greatest resistance to metalaxyl. this alpine areas might be the origin of metalaxyl-resistant isolates of P. infestans in Korea. The A2 genotype with metalaxyl resistance appears to be displacing the A1 genotype which is presently the predominant genotype in Korea.

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