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Effect of SeaR gene on virginiamycins production in Streptomyces virginiae (희소방선균 SeaR 유전자가 Streptomyces virginiae의 virginiamycins 생산에 미치는 영향)

  • Ryu, Jae-Ki;Kim, Hyun-Kyung;Kim, Byung-Won;Kim, Dong-Chan;Lee, Hyeong-Seon
    • Korean Journal of Microbiology
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    • v.51 no.3
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    • pp.256-262
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    • 2015
  • In order to study the effect of the receptor protein (SeaR), which is isolated from Saccharopolyspora erythraea, we introduced the SeaR gene to Streptomyces virginiae as host strains. An effective transformation procedure for S. virginiae was established based on transconjugation by Escherichia coli ET12567/pUZ8002 with a ${\varphi}C31$-derived integration vector, pSET152, which contained int, oriT, attP, and $ermEp^{\ast}$ (erythromycin promotor). Therefore, the pEV615 was introduced into S. virginiae by conjugation and integrated at the attB locus in the chromosome of the recipients by the ${\varphi}C31$ integrase (int) function. Transformants of S. virginiae containing the SeaR gene were confirmed by PCR and transcriptional expression of the SeaR gene in the transformants was analyzed by RT-PCR, respectively. And, we examined the production time of virginiamycins in the culture media of both the transformants and the wild type. The production time of virginiamycins in the wild type and transformants was the same. When 100 ng/ml of synthetic $VB-C_6$ was added to the state of 6 or 8 hour cultivation of wild type and transformants, respectively, the virginiamycins production was induced, meaning that the virginiamycins production in the wild type was detected 2 h early than transformants. From these results, SeaR expression was also affected to virginiamycins production in transformants derived from S. virginiae. In this study, we showed that the SeaR protein worked as a repressor in transformants.

Role of Helix 8 in Dopamine Receptor Signaling

  • Yang, Han-Sol;Sun, Ningning;Zhao, Xiaodi;Kim, Hee Ryung;Park, Hyun-Ju;Kim, Kyeong-Man;Chung, Ka Young
    • Biomolecules & Therapeutics
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    • v.27 no.6
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    • pp.514-521
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    • 2019
  • G protein-coupled receptors (GPCRs) are membrane receptors whose agonist-induced dynamic conformational changes trigger heterotrimeric G protein activation, followed by GRK-mediated phosphorylation and arrestin-mediated desensitization. Cytosolic regions of GPCRs have been studied extensively because they are direct contact sites with G proteins, GRKs, and arrestins. Among various cytosolic regions, the role of helix 8 is least understood, although a few studies have suggested that it is involved in G protein activation, receptor localization, and/or internalization. In the present study, we investigated the role of helix 8 in dopamine receptor signaling focusing on dopamine D1 receptor (D1R) and dopamine D2 receptor (D2R). D1R couples exclusively to Gs, whereas D2R couples exclusively to Gi. Bioinformatic analysis implied that the sequences of helix 8 may affect GPCR-G protein coupling selectivity; therefore, we evaluated if swapping helix 8 between D1R and D2R changed G protein selectivity. Our results suggest that helix 8 is not involved in D1R-Gs or D2R-Gi coupling selectivity. Instead, we observed that D1R with D2R helix 8 or D1R with an increased number of hydrophobic residues in helix 8 relative to wild-type showed diminished ${\beta}$-arrestin-mediated desensitization, resulting in increased Gs signaling.

Prediction of Ozone Concentration by Multiple Regression Analysis in Daegu area (다중회귀분석을 통한 대구지역 오존농도 예측)

  • 최성우;최상기;도상현
    • Journal of Environmental Science International
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    • v.11 no.7
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    • pp.687-696
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    • 2002
  • Air quality monitoring data and meteorology data which had collected from 1995. 1. to 1999. 2. in six areas of Daegu, Manchondong, Bokhyundong, Deamyungdong, Samdukdong, Leehyundong and Nowondong, were investigated to determine the distribution and characteristic of ozone. A equation of multiple regression was suggested after time series analysis of contribution factor and meteorology factor were investigated during the day which had high concentration of ozone. The results show the following; First, 63.6% of high ozone concentration days, more than 60 ppb of ozone concentration, were in May, June and September. The percentage of each area showed that; Manchondong 14.4%, Bokhyundong 15.4%, Deamyungdong 15.6%, Samdukdong 15.6%, Leehyundong 17.3% and Nowondong 21.6%. Second, correlation coefficients of ozone, $SO_2$, TSP, $NO_2$ and CO showed negative relationship; the results were respectively -0.229, -0.074, -0.387, -0.190(p<0.01), and humidity were -0.677. but temperature, amount of radiation and wind speed had positive relationship; the results were respectively 0.515, 0.509, 0.400(p<0.01). Third, $R^2$ of equation of multiple regression at each area showed that; Nowondong 45.4%, Lee hyundong 77.9%, Samdukdong 69.9%, Daemyungdong 78.8%, Manchondong 88.6%, Bokhyundong 77.6%. Including 1 hour prior ozone concentration, $R^2$ of each area was significantly increased; Nowondong 75.2%, Leehyundong 89.3%, Samdukdong 86.4%, Daemyungdong 88.6%, Manchondong 88.6%, Bokhyundong 88.0%. Using equation of multiple regression, There were some different $R^2$ between predicted value and observed value; Nowondong 48%, Leehyundong 77.5%, Samdukdong 58%, Daemyungdong 73.4%, Manchondong 77.7%, Bokhyundong 75.1%. $R^2$ of model including 1 hour prior ozone concentration was higher than equation of current day; Nowondong 82.5%, Leehyundong 88.3%, Samdukdong 80.7%, Daemyungdong 82.4%, Manchondong 87.6%, Bokhyundong 88.5%.

Key Recovery Algorithm from Randomly-Given Bits of Multi-Prime RSA and Prime Power RSA (비트 일부로부터 Multi-Prime RSA와 Prime Power RSA의 개인키를 복구하는 알고리즘)

  • Baek, Yoo-Jin
    • Journal of the Korea Institute of Information Security & Cryptology
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    • v.26 no.6
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    • pp.1401-1411
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    • 2016
  • The Multi-Prime RSA and the Prime Power RSA are the variants of the RSA cryptosystem, where the Multi-Prime RSA uses the modulus $N=p_1p_2{\cdots}p_r$ for distinct primes $p_1,p_2,{\cdots},p_r$ (r>2) and the Prime Power RSA uses the modulus $N=p^rq$ for two distinct primes p, q and a positive integer r(>1). This paper analyzes the security of these systems by using the technique given by Heninger and Shacham. More specifically, this paper shows that if the $2-2^{1/r}$ random portion of bits of $p_1,p_2,{\cdots},p_r$ is given, then $N=p_1p_2{\cdots}p_r$ can be factorized in the expected polynomial time and if the $2-{\sqrt{2}}$ random fraction of bits of p, q is given, then $N=p^rq$ can be factorized in the expected polynomial time. The analysis is then validated with experimental results for $N=p_1p_2p_3$, $N=p^2q$ and $N=p^3q$.

Tissue reactions to Implanted Intracanal Medicaments in Rats (백서에서 수 종의 근관 내 약제에 대한 조직 반응에 관한 연구)

  • Kim, Mi-Ri;Kim, Byung-Hyun;Kim, Won-Kyung
    • Restorative Dentistry and Endodontics
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    • v.29 no.1
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    • pp.23-29
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    • 2004
  • 최근 근관 치료 영역에서는 적절한 기계적 근관 성형과 근관 세척으로만 효과적으로 근관 내 미생될의 숫자를 감소시킬 수 있어 다른 약제의 사용은 권장되고 있지 않다. 그럼 에도 불구하고 수종의 근관내 약제는 감염된 근관에서 미생물의 숫자를 줄이고 근관 내용물의 불활성화와 삼출액을 줄이기 위해 사용되고 있다. 그 중 포름 알데하이드를 함유하고 있는 Depulpin$^{(R)}$과 근관 치료학에서 오랫동안 널리 사용되어온 수산화 칼슘을 포함하고 있는 Tempcanal$^{(R)}$과 Vitapex$^{(R)}$ 등에 대한 세포 독성은 충분한 연구가 이루어지지 못한 상태이다. 이에 본 연구에서는 이들 약제가 백서에서의 세포 독성에 미치는 영향에 관하여 고찰하고자 하였다. Sprague-Dawley계 백서 숫놈 20마리를 사용하여, 각각의 쥐는 케타민과 럼푼을 근육내 주사하여 마취하였고, 복부의 피하 부위를 절개한 뒤 3개씩의 Teflon-coating된 매식체를 삽입하였다 매식체 안에는 각각 Tempcanal$^{(R)}$, Vitapex$^{(R)}$, Depulpin$^{(R)}$을 넣고, 백서 20마리를 6개군으로 나누어 매식체 삽입 후 1주 뒤, 4주 뒤에 희생시켜 매식체 주위 조직을 잘라내고 10%포르말린에 고정 후 파라핀에 포매 하였다 미세 절단기로 4$\mu$m로 연속 절단 후, hematoxy-line-eosin염색 후 3명의 관찰자가 광학 현미경으로 관찰하여 염증의 정도를 4단계로 평가한 뒤 Kruskall-Wallis test(P<0.05)로 통계 처리하였다. 그 결과 제 1군Tempcanal$^{(R)}$ 7일후 군), 제 2군(Vitapex$^{(R)}$ 7일후 군), 제 3군(Depulpin$^{(R)}$ 7일후 군) 모두 중등도의 염증도를 보였으나, 세 군간의 통계학적 유의성은 없었다. 그러나, 제 4군(Tempcanal$^{(R)}$ 30일후 군)과, 제 5군(Vitapex$^{(R)}$ 30일후 군)의 경우에서는 약한 염증도를 보여주었으나, 제 6군(Depulpin$^{(R)}$ 30일후 군)은 가장 심한 염증 반응과 함께 조직 괴사의 양상을 보여주었으며, 4, 5군과 6군간에 통계학적 유의성을 보였다. 본 실험 결과, Depulpin$^{(R)}$은 Tempcanal$^{(R)}$와 Vitapex$^{(R)}$에 비해 높은 세포 독성을 보여주공 있으나, 좀 더 많은 임상적 검증이 필요할 것으로 사료된다.

ODD-EVEN GRACEFUL GRAPHS

  • Sridevi, R.;Navaneethakrishnan, S.;Nagarajan, A.;Nagarajan, K.
    • Journal of applied mathematics & informatics
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    • v.30 no.5_6
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    • pp.913-923
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    • 2012
  • The Odd-Even graceful labeling of a graph G with $q$ edges means that there is an injection $f:V (G)$ to $\{1,3,5,{\cdots},2q+1\}$ such that, when each edge $uv$ is assigned the label ${\mid}f(u)-f(v){\mid}$, the resulting edge labels are $\{2,4,6,{\cdots},2q\}$. A graph which admits an odd-even graceful labeling is called an odd-even graceful graph. In this paper, we prove that some well known graphs namely $P_n$, $P_n^+$, $K_{1,n}$, $K_{1,2,n}$, $K_{m,n}$, $B_{m,n}$ are Odd-Even graceful.

Bacterial Diversity in a Korean Traditional Soybean Fermented Foods (Doenjang and Ganjang) by 16S rRNA Gene Sequence Analysis

  • Cho, Kye-Man;Seo, Weon-Taek
    • Food Science and Biotechnology
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    • v.16 no.2
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    • pp.320-324
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    • 2007
  • The bacterial diversity in Korean soybean-fermented foods was investigated using a PCR-based approach. 16S rRNA sequences were amplified and cloned from two different soybean-fermented foods such as doenjang (soybean paste), and ganjang (soybean sauce). Staphylococcus equorum (60.6%), Tetragenococcus halophila (21.2%), Leuconostoc mesenteroides (9.1%), Lactobacillus sakei (6.1%), and Bacillus subtilis (3.0%) were detected among clones isolated from soybean paste samples and Halanaerobium sp. (37.5%), Halanaerobium fermentans (37.5%), T. halophila (12.5%), Staphylococcus sp. (6.3%), S. equorum (3.1%), and B. subtilis (3.1%) were detected among clones isolated from soybean sauce. Our approach revealed different bacterial distributions and diversity from those previously obtained using culture-dependent methods.

A new efficient route for synthesis of R,R- and S,S-hexamethylpropyleneamine oxime for labeling with technetium-99m

  • Vinay Kumar Banka;Young Ju Kim;Yun-Sang Lee;Jae Min Jeong
    • Journal of Radiopharmaceuticals and Molecular Probes
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    • v.6 no.2
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    • pp.75-91
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    • 2020
  • [99mTc]Tc-Hexamethylpropylene amine oxime (HMPAO) is currently used as a regional cerebral blood flow imaging agent for single photon emission computed tomography (SPECT). The HMPAO ligand exists in two isomeric forms: d,l and meso showing different properties in vivo. Later studies indicated that brain uptake patterns of 99mTc-complexes formed from separated enantiomers differed. Separation of enantiomers is difficult by fractional crystallizations method. Usually, the substance is obtained in low chemical yield in a time-consuming procedure. Furthermore, the final product still contains some impurity. So we have developed new efficient route for synthesis of R,R- and S,S-HMPAO enantiomeric compounds in 6-steps. Nucleophilic substitution (SN2) reactions of 2,2-dimethylpropane-1,3-diamine either with S- (1a) or R-methyl2-chloropropanoate (1b) were performed to produce compounds R,R- (2a) or S,S-isomer (2b) derivatives protected with benzylchloroformate (Cbz), respectively. And then Weinreb amide and methylation reaction using Grignard reagent, oxime formation with ketone group and deprotectiion of Cbz group by hydrogenolysis gave S,S- (7a) or R,R-HMPAO (7b), respectively. Entaniomeric compounds were synthesied with high yield and purity without any undesired product. The 7a or 7b kits containing 10 ㎍ SnCl2-2H2O were labeled with 99mTc with high radiolabeling yield (90%).

Prediction and Experiment of Pressure Drop of R22, R407C and R410A on Design Conditions of Condenser (응축기의 설계조건에서 R22, R407C, R410A의 압력강하 예측 및 실험)

  • 김창덕;박일환;이진호
    • Korean Journal of Air-Conditioning and Refrigeration Engineering
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    • v.16 no.1
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    • pp.42-53
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    • 2004
  • An experimental study on the refrigerant-side pressure drop of slit fin-tube heat exchanger has been carried out. A comparison was made between the predictions of previously proposed empirical correlations and experimental data for the pressure drop on design conditions of condenser in micro-fin tube for R22 and its alternatives, R407C (R32/125/134a, 23/25/52 wt.%) and R410A (R32/125, 50/50 wt.%). Experiments were carried out under the conditions of inlet refrigerant temperature of 6$0^{\circ}C$ and mass fluxes varying from 150 to 250 kg/$m^2$s for R22, R407C and R410A. The inlet air conditions are dry bulb temperature of 35$^{\circ}C$, relative humidity of 40% and air velocity varying from 0.68 to 1.43 m/s. Experiments show that pressure drop for R410A and R407C were 17.8∼20.2% and 5∼6.8% lower than those of R22 respectively for the degree of subcooling of 5$^{\circ}C$. For the mass fluxes of 200∼250 kg/$m^2$s, the deviation between the experimental and predicted values for the pressure drop was less than $\pm$20% for R22, R407C and R410A.

Detection of Nitrate/Nitrite Bioavailability in Wastewater Using a luxCDABE-Based Klebsiella oxytoca Bioluminescent Bioreporter

  • Abd-El-Haleem, Desouky;Ripp, Steven;Zaki, Sahar;Sayler, Gary S.
    • Journal of Microbiology and Biotechnology
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    • v.17 no.8
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    • pp.1254-1261
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    • 2007
  • In the present study, we have constructed a bioluminescent bioreporter for the assessment of nitrate/nitrite bioavailability in wastewater. Specifically, an approximately 500-bp DNA fragment containing a nitrate/nitrite-activated nasR-like promoter (regulating expression of genes encoding nitrite reductase in the genus Klebsiella) was fused upstream of the Vibrio fischeri luxCDABE gene cassette in a modified mini-Tn5 vector. Characterization of this strain, designated W6-1, yielded dose-dependent increased bioluminescence coincident with increased nitrate, nitrite, and ammonium added to the growth medium from 1 to 11 ppm. Bioluminescence in response to nitrogen species addition was light dependent up to 10, 7, and 8 ppm with nitrate, nitrite, and ammonium, respectively. This response was linear in the range from 1 to 8 ppm for nitrate ($R^2=0.98$), 1 to 6 ppm for nitrite ($R^2=0.99$), and 1 to 7 ppm for ammonium ($R^2=0.99$). A significant bioluminescent response was also recorded when strain W6-1 was incubated with slurries from aged, nitrate/nitrite contaminated wastewater. Thus, bioreporter strain W6-1 can be used to elucidate factors that constrain the use of nitrate/nitrite in wastewaters.