• Parasites, Hosts and Diseases
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• 제45권3호
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• pp.165-174
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• 2007

Toxoplasma gondii GRA10 expressed as a GFP-GRA10 fusion protein in HeLa cells moved to the nucleoli within the nucleus rapidly and entirely. GRA10 was concentrated specifically in the dense fibrillar component of the nucleolus morphologically by the overlap of GFP-GRA10 transfection image with IFA images by monoclonal antibodies against GRA10 (Tg378), B23 (nucleophosmin) and C23 (nucleolin). The nucleolar translocalization of GRA10 was caused by a putative nucleolar localizing sequence (NoLS) of GRA10. Interaction of GRA10 with TATA-binding protein associated factor 1B (TAF1B) in the yeast two-hybrid technique was confirmed by GST pull-down assay and immunoprecipitation assay. GRA10 and TAF1B were also co-localized in the nucleolus after co-transfection. The nucleolar condensation of GRA10 was affected by actinomycin D. Expressed GFP-GRA10 was evenly distributed over the nucleoplasm and the nucleolar locations remained as hollows in the nucleoplasm under a low dose of actinomycin D. Nucleolar localizing and interacting of GRA10 with TAF1B suggested the participation of GRA10 in rRNA synthesis of host cells to favor the parasitism of T. gondii.

• 한국지하수토양환경학회:학술대회논문집
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• 한국지하수토양환경학회 2003년도 추계학술발표회
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• pp.152-157
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• 2003

Diesel-contaminated soils were ozonated for different times (0 - 900 min) and incubated for 9 wk to monitor petroleum hydrocarbons (PH)-degradative potential of indigenous microorganisms in the soils. Increased ozonation time decreased not only concentration of PH but also number of microorganisms in the soils. Microorganisms in the ozonated soils increased during 9-wk incubation as monitored by culture- and nonculture-based methods. Higher (1-2 orders of magnitude) cell number was observed by quantitative analysis of soil DNA using probes detecting genes encoding 165 rRNA(rrn), naphthalene dioxygenase (nahA), toluene dioxygenase (todC), and alkane hydroxylase (alkB) than microbial abundance estimated by culture-based methods. Such PH-degraders were relatively a few or under detection limit in 900-min ozonated soil. Further PH-removal observed during the incubation period supported the presence of PH-degraders in ozonated soils. Highest reduction (25.4%) of total PH (TPH) was observed in 180-min ozonated soil white negligible reduction was shown in 900-min ozonated soil during the period, resulting in lowest TPH-concentration in 180-min ozonated soil among the ozonated soils. Microbial community composition in 9-wk incubated soils revealed slight difference between 900-min ozonated and unozonated soils as analyzed by whole cell hybridization using group-specific rRNA-targeted oligonucleotides. Results of this study suggest that appropriate ozonation and subsequent biodegradation by indigenous microorganisms may be a cost-effective and successful remediation strategy for PH-contaminated soils.

• Fisheries and Aquatic Sciences
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• 제16권3호
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• pp.165-169
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• 2013

We report on mycobacteriosis in an imported tropical ornamental fish Macropodus opercularis commonly known as the paradise fish. Mass mortality occurred in paradise fish imported to Korea from Southeast Asia in 2008. The affected fish did not show any outward clinical signs, but enlargement of the spleen, kidneys, and liver was observed on dissection. Histopathological examination revealed numerous granulomas in the spleen, and acid-fast bacilli were observed in the centers of the granulomas. About 65% of spleen DNA samples were PCR positive using mycobacteria-specific primers targeting the 16S rRNA and hsp65 genes. The nucleotide identities of the 16S rRNA and hsp65 genes with those of Mycobacterium marinum were 99.5% and 99.4%, respectively. Although the bacterium was not cultured, the molecular diagnosis and histopathological findings were consistent with mycobacteriosis in paradise fish.

• Journal of Microbiology and Biotechnology
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• 제22권2호
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• pp.159-165
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• 2012

The rhizobacterial composition varies according to the soil properties. To test if the effect of herbicides on the rhizobacterial communities of genetically modified NK603 glyphosate-tolerant maize varies according to different soil locations, a comparison was made between the effects of glyphosate (Roundup Plus), a post-emergence applied herbicide, and a pre-emergence applied herbicide (GTZ) versus untreated soil. The potential effect was monitored by direct amplification, cloning, and sequencing of the soil DNA encoding 16S rRNA, and high-throughput DNA pyrosequencing of the bacterial DNA coding for the 16S rRNA hypervariable V6 region. The results obtained using three different methods to analyze the herbicide effect on the rhizobacterial communities of genetically modified NK603 maize were comparable to those previously obtained when glyphosate-tolerant maize was grown in soil with different characteristics. Both herbicides decreased the bacterial diversity in the rhizosphere, with Actinobacteria being the taxonomic group most affected. The results suggest that both herbicides affected the structure of the maize rhizobacterial community, but glyphosate was environmentally less aggressive.

• 생명과학회지
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• 제17권1호
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• pp.162-165
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• 2007

Brown Ring Disease (BRD) is a bacterial disease caused by Vibrio tapetis which affects cultured clam Ruditapes philippinarum and causes heavy economic losses on Atlantic coasts of france, Spain and England. In this study, to evaluate the effective detection of the pathogen, specific primer set based on 16S ribosomal RNA (rRNA) sequences designed for rapid detection of V. tapetis. Polymerase chain reaction (PCR) with this primer set produced the specific band for each V. tapetis. The length of PCR product using designed primer set of Vbts-F and Vbts-R was about 400 bp. Therefore, these primers will be provided with a basic tool for rapid detection of V. tapetis in the various cases such as examination of imported aquatic products, diagnosis of aquatic organisms, and etc.

• 미생물학회지
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• 제38권2호
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• pp.133-138
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• 2002

금속 이온 환훤 세균에 의한 철(III)환원은 생물지구화학적 물질순환(biogeochemical cycle)에 무척 중요하다. 이는 크롬(Ⅵ)이나 우라늄(Ⅵ)과 같은 독성 중금속 물질의 환원과 유기물질의 산화에 모텔이 되기 때문이다. 총 37균주의 Fe (III)환원 세균을 소양호와 천호지의 저질토에서 각각 분리하였다. 두 정점 중 초기 Fe (II)의 함유량이 가장 높았던 것은 소양호의 저질토였으나 Fe (III)환훤능은 반대로 가장 낮은 Fe (II)함유량을 보여 주었던 천호지가 높게 나타났다. 또한 분리한 균주 중 천호지에서 분리한 균주 C2와 C3가 가장 높은 Fe (III) 환훤능을 보여 주었으며 이 균주를 이용하여 다양한 전자 공여체의 이용 여부를 실험하였다. Glucose, yeast extract, acetate, ethanol, toluene등을 이용하여 실험한 결과 두 균주 모두 glucose와 yeast extract만을 전자 공여체로 이용하였다. 또한 전자 수용체로 토양에 광범위하게 존재하는 humid acid와 nitrate를 이용하였으며 수율이 높은 nitrate reduction에 의해 환원되었던 humic acid가 다시 재 산화되는 것을 관촬할수 있었다. 활성능이 우수한 균주 C2와C3의 165S rRNA유전자 분석 결과에 의하면 Aeromonas hydrophila와 95%의 유사성을 보여주었다.

• BMB Reports
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• 제50권4호
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• pp.208-213
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• 2017

Vascular endothelial growth factor (VEGF) is an essential cytokine that has functions in the formation of new blood vessels and regression of cardiac hypertrophy. VEGF/VEGF-receptor-1 (VEGFR1) signaling plays a key role in the regression of cardiac hypertrophy, whereas VEGF/VEGFR2 signaling leads to cardiac hypertrophy. In this study, we identified the prohypertrophic role of miR-374 using neonatal rat ventricular myocytes (NRVMs). Our results showed that overexpression of miR-374 activated G protein-coupled receptor-mediated prohypertrophic pathways by the inhibition of VEGFR1-dependent regression pathways. Luciferase assays revealed that miR-374 could directly target the 3'-untranslated regions of VEGFR1 and cGMP-dependent protein kinase-1. Collectively, these findings demonstrated that miR-374 was a novel pro-hypertrophic microRNA functioning to suppress the VEGFR1-mediated regression pathway.

• 약학회지
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• 제52권3호
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• pp.165-171
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• 2008

To develop effective skin whitening agents, we tested natural herbal extracts for their melanogenic inhibitory activities. Sedum samentosum was selected for its inhibitory effect on melanogenesis in B16 melanoma cells. Ethanolic extract of S. samentosum (SSE) was evaluated for antioxidative effect and tyrosinase inhibitory activity of melanogenesis. We investigated the changes in protein level and mRNA level of tyrosinase, tyrosinase related protein (TRP)-1 and TRP-2 by using western blotting and RT-PCR, respectively. SSE showed scavenging activities of free radicals and reactive oxygen species (ROS) with the $IC_{50}$ of 342.7 $\mug/ml$ against 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical and 64.69 $\mug/ml$ against superoxide radicals in the xanthine/xanthine oxidase system, respectively. SSE treatment suppressed the biosynthesis of melanin up to 46% and reduced tyrosinase activity up to 51% at 100 $\mug/ml$ in B16 melanoma cells. The tyrosinase activity and tyrosinase expression in B16 melanoma cells were reduced in a dose-dependent manner by SSE. Also, SSE was able to significantly inhibit tyrosinase and TRP-1 expression in mRNA level. These results suggest that SSE inhibited melanin production which may be dependent on tyrosinase activity and expression in B16 melanoma cells, and an effective whitening agent for the skin.

• 한국식품위생안전성학회지
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• 제15권2호
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• pp.128-136
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• 2000

수입 냉동어패류에서 24주의 Vibiro 균주를 순수 분리하여 그들의 생리, 생화학적 특성에 따라 동정한 결과 V. cholerae non-O1과 V. diazotrophicus가 각 2주, V. hollisae 1주, V. natriegens 5주, V. fluvialis 8주, V. nereis 4주인 것으로 밝혀졌고 2주는 Vibirio속 균주가 아닌 것으로 나타났다. 이 균주들을 API-2OE kit로 동정한 결과는 위의 결과와 매우 달라, V. cholerae로 동정된 2주와 fluvialis로 동정된 5균주의 경우에만 결과가 일치하였고 나머지는 Vibrio속이 아닌 것으로 분석되었다. 식품류에서 V. cholerae가 검출된 점에 주목하여 이 분리균들의 동정을 보다 정확히 하기 위하여 분리균들의 165 rRNA를 증폭시켜 이들의 RFLP를 분석하였다. 그 결과, r cholerae로 동정된 두 균주는 동일한 RFLP양상을 갖고 있었으며, V. cholerae보다는 V. proteolyticus의 RFLP에 보다 가까운 것으로 나타났다. 따라서 식품류의 병원균 검색을 보다 정확하고 신속하게 할 수 있도록 효율적인 검색 방법의 개발이 시급하다고 하겠다.

• 미생물학회지
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• 제43권4호
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• pp.311-316
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• 2007

탄소원으로 thiodiglycol(TDG)을 함유한 배지에서 농후배양하여 인삼토양으로부터 TDG 분해균을 분리하였다. 분리균 WS-32의 형태적, 생화학적, 유전학적 특성을 조사한 결과 분리균이 Alcaligenes faecalis와 유사한 생화학적 성질을 지니고 있으며, 16S rRNA 서열이 Cupriavidus 속 균주와 유사도가 높은 균주로 판명되었다. WS-32는 $33^{\circ}C{\sim}37^{\circ}C$, pH $6.0{\sim}8.0$에서 성장이 우수하였으며, TDG에 의해 성장에 약간의 저해를 받지만, 배양후기에서는 이를 탄소원으로 이용하는 현상을 보였다. HPLC를 통해 배양액 내 잔존하는 TDG를 분석한 결과 2일 배양하였을 때 배지내 잔존하는 TDG가 상당량 감소한 것으로 확인되었다. 분리균 WD-32의 균체 파쇄상등액은 TDG의 산화활성을 보였으며, pH 8.0과 $45^{\circ}C$에서 산화활성이 가장 높았다.