• Title/Summary/Keyword: 프라이머

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Practical Use of DNA Polymorphisms in the Avian Immunoglobulin Light Chain Constant Domain for Species-specific PCR (조류의 종 특이 구별을 위한 항체 유전자의 이용)

  • Choi, J.W.;Kang, S.J.;Park, M.S.;Kim, J.-K.;Han, J.Y.
    • Journal of Animal Science and Technology
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    • v.50 no.1
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    • pp.9-18
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    • 2008
  • Species-specific polymorphisms in chicken, pheasant, turkey, and quail were identified by cloning and sequencing of the immunoglobulin constant domain (IgLC). A set of species-specific primers were then designed on the basis of polymorphisms in the IgLC between species, as well as two additional sets of primers for the cytochrome b and tapasin genes, for the purpose of species identification. Together, the primers successfully distinguished specific species from chicken by species-specific PCR. This simple but unambiguous method may be used to screen avian inter-species germline chimeras, which are valuable models for the conservation of endangered species.

Slip Behavior of Friction Type High-Tension Bolted Joints with Oversize Hole (과대공을 갖는 고장력 볼트 마찰이음부의 미끄러짐 거동)

  • Cho, Sun Kyu
    • Journal of Korean Society of Steel Construction
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    • v.9 no.3 s.32
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    • pp.301-307
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    • 1997
  • In field fabrication of steel members, the oversize hole is frequently required due to reaming and mismatching. But, there are no provisions and investigations about oversize hole in the Korean specifications. So, in this study, the tension test of friction type high-tention bolted joints is performed with parameters of bolt hole size, surface treatment and tightening force, and investigate the effect of slip behavior with those parameters. From the results, the enough tightening force is needed to obtain some degree slip load in shot blast treatment case, although tightening force is reduced somewhat, it is no problem to guarantee slip load in zincrich primer case. The slip behavior of joints with oversize hole(26mm) is similar to the slip behavior of joints with hole of nominal size.

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Diversity of Repetitive Sequences in Toxigenic Cyanobacteria Detected by Repetitive Oligonucleotides-Primed PCR (반복염기 프라이머 PCR에 의해 탐색된 독성 남조류에 분포한 반복염기의 다양성)

  • Koo, Jung-Mo;Yoo, Soon-Ae;Park, Sang-Ho;Choi, Chang-Won
    • Korean Journal of Ecology and Environment
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    • v.33 no.3 s.91
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    • pp.206-212
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    • 2000
  • Since some cyanobacterial isolates under selective culturing conditions are lacking of characteristic specialized cells or showing altered morphology, the morpho-taxonomic criteria are not accurate enough to discriminate between species. Instead of morphological parameters, a method based on the single or the combination of repetitive oligonucleotides in a single PCR, repetitive oligonucleotides-primed PCR (ROP-PCR), was applied to generate DNA profiles for members of the cyanobacterial genera Anabaena and Oscillatoria, both of which are responsible for causing poisonous blooms in various freshwater systems. ROP-PCR performed on 10 isolates of the cyanobacteria with ERIC and REP sequences from gram-negative bacteria, STRR1A and LTRR sequences derived from cyanobacterial genome, and eukaryotic repetitive sequences, led to the identification of distinct genotypes, and provided specific and repeatable DNA fingerprints for cyanobacterial isolates. Grouping analysis of cyanobacterial isolates showed a signifiant difference depending on the primer used in PCR.

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Evaluation of Self-Cleaning Performance of Mortar Using Nano-Titanium Dioxide Photocatalytic Coating (나노 이산화티탄 광촉매 코팅을 적용한 모르타르의 자기정화성능 평가)

  • Yang, In-Hwan;Jeon, Hyo-Jin;Lee, Seung-Jin
    • Journal of the Korean Recycled Construction Resources Institute
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    • v.10 no.1
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    • pp.56-65
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    • 2022
  • This paper aims at estimating self-cleaning performance of mortar coated with photocatalytic suspension under various conditions. Experimental variables included the concentration (1.5 % and 3.0 %) of photocatalytic suspension for coating mortar specimen, the presence of hydrophilic agent in photocatalytic suspension, and applying the primer on the surface of mortar. The color change of methylene blue solution increased and accordingly self-cleaning performance increased as photocatalytic concentration increased. The presence of hydrophilic agent in photocatalytic suspension slightly decreased the self-cleaning performance compared to the conventional photocatalytic suspension. Test results also showed that mortar specimen including primer and specimen not including primer did not show significantly different self-cleaning performance. In addition, cracks on the surface of mortar specimens decreased as the photocatalytic concentration increased. Therefore, increase in cracks on the surface of mortar at different photocatalytic concentration might adversely affect the self-cleaning performance of mortar specimens.

Genetic status of Acanthamoeba spp. Korean isolates on the basis of RAPD markers (RAPD 표지자 분석 에 의한 가시아메바속 한국분리주의 유전적 지위)

  • 홍용표;오승환
    • Parasites, Hosts and Diseases
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    • v.33 no.4
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    • pp.341-348
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    • 1995
  • Genetic status of Acnnthamoebc sap. were tested on the basis of random amplified polymorphic DNA (RAPD) marker analysis. Four previously established Accnthcmoebn species, 4 Korean isolates of Acnnthamoeba sp., and one American isolate of Acanthcmoebc sp. were analyzed by RAPD-PCR using an arbitrary decamer primers. Amplification products were fractionated by agarose gel electrophoresis and slainrd by ethidium bromide . Eighteen primers produced DNA amplification profiles revealing clear differences among 4 species. Nine of them also produced DNA amplification profiles which included some isolate-specific amplification products. On the basis of amplified fragments by 18 primers, the pairwise similarity indices between A. culbensoni and other species (i.e. A. hntchetti, A. trinngularis, A. polyphaga) were 0.300, 0.308, and 0.313, respectively. Similarity index between A. hctchetti and A. triansulcris was 0.833. The mean similarity index among the 3 Korean isolates (YM-2, -3, -4) was 0.959 and 0.832 among them and 2 other species (A. hatchetti and A. triongulnris). The mean similarity index among YM-5 and other Korean isolates (YM-2, -3, -4) was 0.237. However, the similarity index between YM-5 and A. culbeksoni was 0.857, which suggests that YM-5 is genetically more similar to A. culbertsoni than other Korean isolates. Phonogram reconstructed by UPGMA method revealed that there are two groups: one group consists of A. hctchetti, A. tlonsulcns, and 3 Korean isolates (YM-2, -3, -4) , and the other group consists of A. cuLbensoni. A. polwphosc, HOV, and YM-5.

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Microshear bond strength of a self-etching primer adhesive to enamel according to the type of bur (삭제기구의 종류에 따른 자가부식 프라이머 접착제의 법랑질에 대한 미세전단 결합강도)

  • Jeong, Jin-Ho;Cho, Young-Gon;Lee, Myung-Seon
    • Restorative Dentistry and Endodontics
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    • v.36 no.6
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    • pp.477-482
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    • 2011
  • Objectives: The purpose of this study was to compare the microshear bond strength (uSBS) to enamel prepared with different burs and to determine what type of bur were chosen when a self-etching primer adhesive was used. Materials and Methods: Enamel of forty-two human molars were used. They were divided into one of six groups (n = 7), Group 1, coarse (125 - 150 ${\mu}m$) diamond bur; Group 2, standard (106 - 125 ${\mu}m$) diamond bur; Group 3, fine (53 - 63 ${\mu}m$) diamond bur; Group 4, extrafine (20 - 30 ${\mu}m$) diamond bur; Group 5, plaincut carbide bur (no. 245); Group 6, cross-cut carbide bur (no. 557). Clearfil SE Bond and Clearfil AP-X (Kuraray Medical Inc.) was bonded to enamel surface. The bonded specimens were subjected to uSBS testing. Results: The uSBS of Group 4 was the highest among groups and it was significantly higher than that of Groups 1, 2, 3, and 6 (p < 0.05), but it was not significantly different from that of Group 5. Conclusions: Different burs used on enamel surface affected the microshear bond strengths of a self-etching primer adhesive to the enamel surface. In the case of Clearfil SE Bond, extrafine diamond and plain-cut carbide bur are recommended for bonding to enamel.

Multiplex PCR Assay for the Simultaneous Detection of Major Pathogenic Bacteria in Soybean (콩에 발생하는 주요 병원세균의 동시검출을 위한 다중 PCR 방법)

  • Lee, Yeong-Hoon;Kim, Nam-Goo;Yoon, Young-Nam;Lim, Seung-Taek;Kim, Hyun-Tae;Yun, Hong-Tae;Baek, In-Youl;Lee, Young-Kee
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.58 no.2
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    • pp.142-148
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    • 2013
  • Bacterial diseases in soybean are bacterial pustule by Xanthomonas axonopodis pv. glycines, wildfire by Pseudomonas syringae pv. tabaci, bacterial blight by Pseudomonas savastanoi pv. glycines and bacterial brown spot by Pseudomonas syringae pv. syringae in Korea. It is difficult to identify each disease by early symptoms in fields, because the initial symptoms of these diseases are very similar to each other. In this study, we developed multiplex PCR detection method for rapid and accurate diagnosis of bacterial diseases. The glycinecin A of X. axonopodis pv. glycines, the tabtoxin of P. syringae pv. tabaci, the coronatine of P. savastanoi pv. glycines and the syringopeptin of P. syringae pv. syringae have been reported previously. These bacteriocin or phytotoxin producing genes were targeted to design the specific diagnostic primers. The primer pairs for diagnosis of each bacterial diseases were selected without nonspecific reactions. The studies on simultaneous diagnosis method were also conducted with primarily selected 21 primers. As a result, we selected PCR primer sets for multiplex PCR. Sizes of the amplified PCR products using the multiplex PCR primer set consist of 280, 355, 563 and 815 bp, respectively. This multiplex PCR method provides a efficient, sensitive and rapid tool for the diagnosis of the bacterial diseases in soybean.

Selective Detection of Salmonella sp. and Salmonella Typhimurium in Meat by Polymerase Chain Reaction (PCR을 이용한 육류 내 Salmonella sp. 및 Salmonella Typhimurium 분리 검출)

  • Joo, Jong-Won;Hong, Kyung-Pyo;Kim, Yong-Hui;Cho, Sang-Buem
    • Journal of the East Asian Society of Dietary Life
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    • v.19 no.2
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    • pp.295-300
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    • 2009
  • The specificity and sensitivity of oligonucleotide primers were examined for the rapid detection of Salmonella in meat samples. The oligonucleotide primers used in this study were designed with the modification of mdh and invA sequence in the chromosome of Salmonella Typhimurium. Through the subsequent analysis of the specificity and sensitivity of the primers, two types of oligonucleotide primers, SLM1 and SLT4 were selected for the detection of Salmonella genus specific and S. Typhimurium species specific, respectively. The lowest detection limit of each primer was represented as 1 cell per reaction when reacted with a prepared DNA solution. The detection efficiency of the two primers was analysed with beef and pork samples intentionally contaminated with a mixture of Salmonella culture, and three preparation methods -, namely direct reaction after extraction, enrichment after extraction, and DNA extraction after enrichment for PCR reaction, - were also compared. No differences were found in the results according to meat sources and preparation methods.

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Effect of surface treatment on shear bond strength between artificial resin teeth and 3D printing denture base resin (인공치의 표면처리가 3D 프린팅 의치상레진과의 전단결합강도에 미치는 영향)

  • Choi, Jeehye;Lee, Younghoo;Hong, Seoung-jin;Paek, Janghyun;Noh, Kwantae;Pae, Ahran;Kwon, Kung-Rock;Kim, Hyeong-Seob
    • The Journal of Korean Academy of Prosthodontics
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    • v.58 no.4
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    • pp.300-305
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    • 2020
  • Purpose: The purpose of this study is to compare the shear bond strength of 3D printing denture base resin according to surface treatment of artificial teeth. Materials and methods: 3D printing denture base resin was fabricated as specimens using 3D printer. The experimental group divided the surface treatment of artificial teeth into five groups according to the application of sandblasting and primer (n=10). Shear bond strengths between denture base and artificial teeth were measured by universal testing machine. All measurements were analyzed by one-way ANOVA and Turkey test (α=.05). Fracture mode of each specimen was analyzed. Microscopic evaluation was conducted by using a scanning electron microscope. Results: Unsurfaced treated group represented the lowest value. The primer groups had significantly higher result values (P<.05). Most specimens of the primer groups had cohesive failure. Conclusion: In 3D printing denture base resin group, mechanical and chemical surface treatment of artificial teeth has increased the shear bond strength. Therefore, if dentures are produced using 3D printing, proper mechanical and chemical treatment of artificial teeth is necessary for adhesion of dentures and artificial teeth.

Detection of Carnation necrotic fleck virus and Carnation ringspot virus Using RT-PCR (RT-PCR에 의한 카네이션괴저바이러스와 카네이션둥근반점바이러스 정밀진단)

  • Lee, Siwon;Kang, Eun-Ha;Heo, Noh-Yeol;Kim, Sang-Mok;Kim, Yu-Jeong;Shin, Yong-Gil
    • Research in Plant Disease
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    • v.19 no.1
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    • pp.36-44
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    • 2013
  • Carnation is considered to be one of the top three cutting flowers in the world, which is a main crop with 21 billion annual volume of manufacture. The four carnation items such as cuttings, seed, plant and unrooted cuttings are imported and exported. Viruses can be easily transmitted during vegetative propagation of carnation. Carnation necrotic fleck virus (CNFV) and Carnation ringspot virus (CRSV) are designated as Korea plant quarantine viruses and inspected. This study was aimed to develop specific primer sets for easy and rapid detection of CNFV and CRSV. Two RT-PCR primer sets were efficiently amplified 288 and 447 bp fragments for CNFV and 503 549 bp fragments for CRSV. Furthermore, developed nested primer sets make possible to high sensitive detection and verification. CNFV nested PCR primer sets all produced band of 147 bp and CRSV nested PCR primer sets did bands of 395 and 347 bp. In addition, plasmid inserted 6 sequences in amplicon were used as a positive control to improve inspection confidence. The successful application of PCR module newly developed in this study will be highly useful for detect of CNFV and CRSV for quarantine inspections.