• KIPS Transactions on Computer and Communication Systems
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• v.8 no.10
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• pp.231-238
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• 2019

Analyzing next-generation genome sequencing data in a conventional way using single server may take several tens of hours depending on the data size. However, in order to cope with emergency situations where the results need to be known within a few hours, it is required to improve the performance of a single genome analysis. In this paper, we propose a parallelized method for pre-processing genome sequence data which can reduce the analysis time by utilizing the big data technology and the highperformance computing cluster which is connected to the high-speed network and shares the parallel file system. For the reliability of analytical data, we have chosen a strategy to parallelize the existing analytical tools and algorithms to the new environment. Parallelized processing, data distribution, and parallel merging techniques have been developed and performance improvements have been confirmed through experiments.

• Journal of the Institute of Convergence Signal Processing
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• v.23 no.1
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• pp.15-20
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• 2022

An improvement of computational resources with a large scale cluster service is available to the individual person, which has been limited to the original industry and research institute. Therefore, the application of powerful computational resources to the engineering design has been increased fast. In naval and marine industry, the application of Computational Fluid Dynamics, which requires a huge computational effort, to a design of ship and offshore structure has been increased. Floating bodies such as the ship or offshore structure is exposed to ocean waves, current and wind in the ocean, therefore the precise modelling of those environmental disturbances is important in Computational Fluid Dynamics. Especially, ocean waves has to be nonlinear rather than the linear model based on the superposition due to a nonlinear characteristics of Computational Fluid Dynamics. In the present study, a fast reconstruction technique is suggested and it is validated from a series of simulations by using the Computational Fluid Dynamics.

• The Journal of the Acoustical Society of Korea
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• v.25 no.2
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• pp.78-87
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• 2006

In this paper. we propose an effective mask estimation scheme for missing-feature reconstruction in order to achieve robust speech recognition under unknown noise environments. In the previous work. colored noise is used for training the mask classifer, which is generated from the entire frequency Partitioned signals. However it gives a limited performance under the restricted number of training database. To reflect the spectral events of more various background noise and improve the performance simultaneously. a new Bayesian classifier for mask estimation is proposed, which works independent of other frequency bands. In the proposed method, we employ the colored noise which is obtained by combining colored noises generated from each frequency band in order to reflect more various noise environments and mitigate the 'sparse' database problem. Combined with the cluster-based missing-feature reconstruction. the performance of the proposed method is evaluated on a task of noisy speech recognition. The results show that the proposed method has improved performance compared to the Previous method under white noise. car noise and background music conditions.

• Journal of radiological science and technology
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• v.32 no.1
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• pp.45-52
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• 2009

Digital Mammography is an efficient imaging technique for the detection and diagnosis of breast pathological disorders. Six mammographic criteria such as number of cluster, number, size, extent and morphologic shape of microcalcification, and presence of mass, were reviewed and correlation with pathologic diagnosis were evaluated. It is very important to find breast cancer early when treatment can reduce deaths from breast cancer and breast incision. In screening breast cancer, mammography is typically used to view the internal organization. Clusterig microcalcifications on mammography represent an important feature of breast mass, especially that of intraductal carcinoma. Because microcalcification has high correlation with breast cancer, a cluster of a microcalcification can be very helpful for the clinical doctor to predict breast cancer. For this study, three steps of quantitative evaluation are proposed : DoG filter, adaptive thresholding, Expectation maximization. Through the proposed algorithm, each cluster in the distribution of microcalcification was able to measure the number calcification and length of cluster also can be used to automatically diagnose breast cancer as indicators of the primary diagnosis.

• Progress in Medical Physics
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• v.14 no.4
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• pp.240-248
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• 2003

The Monte Carlo calculation is the most accurate means of predicting radiation dose, but its accuracy is accompanied by an increase in the amount of time required to produce a statistically meaningful dose distribution. In this study, the effects on calculation time by introducing variance reduction techniques and increasing computing power, respectively, in the Monte Carlo dose calculation for a 6 MV photon beam from the Varian 600 C/D were estimated when maintaining accuracy of the Monte Carlo calculation results. The EGSnrc­based BEAMnrc code was used to simulate the beam and the EGSnrc­based DOSXYZnrc code to calculate dose distributions. Variance reduction techniques in the codes were used to describe reduced­physics, and a computer cluster consisting of ten PCs was built to execute parallel computing. As a result, time was more reduced by the use of variance reduction techniques than that by the increase of computing power. Because the use of the Monte Carlo dose calculation in clinical practice is yet limited by reducing the computational time only through improvements in computing power, introduction of reduced­physics into the Monte Carlo calculation is inevitable at this point. Therefore, a more active investigation of existing or new reduced­physics approaches is required.

• KIPS Transactions on Computer and Communication Systems
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• v.6 no.3
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• pp.105-112
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• 2017

PCI Express is a bus technology that connects the processor and the peripheral I/O devices that widely used as an industry standard because it has the characteristics of high-speed, low power. In addition, PCI Express is system interconnect technology such as Ethernet and Infiniband used in high-performance computing and computer cluster. PGAS(partitioned global address space) programming model is often used to implement the one-sided RDMA(remote direct memory access) from multi-host systems, such as computer clusters. In this paper, we design and implement a OpenSHMEM API based on PCI Express maintaining the existing features of OpenSHMEM to implement RDMA based on PCI Express. We perform experiment with implemented OpenSHMEM API through a matrix multiplication example from system which PCs connected with NTB(non-transparent bridge) technology of PCI Express. The PCI Express interconnection network is currently very expensive and is not yet widely available to the general public. Nevertheless, we actually implemented and evaluated a PCI Express based interconnection network on the RDK evaluation board. In addition, we have implemented the OpenSHMEM software stack, which is of great interest recently.

• Journal of the Korea Society of Computer and Information
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• v.18 no.6
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• pp.29-36
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• 2013

In wireless sensor networks, energy is the most important consideration because the lifetime of the sensor node is limited by battery. Most of the existing energy efficient routing protocols use the minimum energy path to minimize energy consumption, which causes an unbalanced distribution of residual energy among nodes. As a result, the power of nodes on energy efficient paths is quickly depletes resulting in inactive. To solve these problems, a method to equalize the energy consumption of the nodes has been proposed, but do not consider the link error rate in the wireless environment. In this paper, we propose a uniform energy consumption of cluster-based multi-hop routing mechanism considering the residual energy and the link error rate. This mechanism reduces energy consumption caused by unnecessary retransmissions and distributes traffic evenly over the network because considering the link error rate. The simulation results compared to other mechanisms, the proposed mechanism is energy-efficient by reducing the number of retransmissions and activation time of all nodes involved in the network has been extended by using the energy balanced path.

• Journal of the Korea Society of Computer and Information
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• v.18 no.11
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• pp.23-30
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• 2013

In this paper, we propose pre-arrangement based task scheduling scheme to reduce MapReduce job processing time. If a task and data to be processed do not locate in same node, the data should be transmitted to node where the task is allocated on. In that case, a job processing time increases owing to data transmission time. To avoid that case, we schedule tasks into two steps. In the first step, tasks are sorted in the order of high data locality. In the second step, tasks are exchanged to improve their data localities based on a location information of data. In performance evaluation, we compare the proposed method based Hadoop with a default Hadoop on a small Hadoop cluster in term of the job processing time and the number of tasks sorted to node without data to be processed by them. The result shows that the proposed method lowers job processing time by around 18%. Also, we confirm that the number of tasks allocated to node without data to be processed by them decreases by around 25%.

• Journal of the Korea Society for Simulation
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• v.18 no.3
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• pp.47-59
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• 2009

Due to the application-specific nature of wireless sensor networks, the sensitivity to such a requirement as data reporting latency may vary depending on the type of applications, thus requiring application-specific algorithm and protocol design paradigms which help us to maximize energy conservation and thus the network lifetime. In this paper, we propose a novel delay-adaptive sensor scheduling scheme for energy-saving data gathering which is based on a two phase clustering (TPC). The ultimate goal is to extend the network lifetime by providing sensors with high adaptability to the application-dependent and time-varying delay requirements. The TPC requests sensors to construct two types of links: direct and relay links. The direct links are used for control and forwarding time critical sensed data. On the other hand, the relay links are used only for data forwarding based on the user delay constraints, thus allowing the sensors to opportunistically use the most energy-saving links and forming a multi-hop path. Simulation results demonstrate that cluster-based delay-adaptive data gathering strategy (CD-DGS) saves a significant amount of energy for dense sensor networks by adapting to the user delay constraints.

• Journal of the Korea Society of Computer and Information
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• v.28 no.8
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• pp.195-204
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• 2023

In this study, prompt engineering that improves prompts was explored to improve the performance of teaching and learning materials recommendations using generative artificial intelligence such as GPT and Stable Diffusion. Picture materials were used as the types of teaching and learning materials. To explore the impact of the prompt composition, a Zero-Shot prompt, a prompt containing learning target grade information, a prompt containing learning goals, and a prompt containing both learning target grades and learning goals were designed to collect responses. The collected responses were embedded using Sentence Transformers, dimensionalized to t-SNE, and visualized, and then the relationship between prompts and responses was explored. In addition, each response was clustered using the k-means clustering algorithm, then the adjacent value of the widest cluster was selected as a representative value, imaged using Stable Diffusion, and evaluated by 30 elementary school teachers according to the criteria for evaluating teaching and learning materials. Thirty teachers judged that three of the four picture materials recommended were of educational value, and two of them could be used for actual classes. The prompt that recommended the most valuable picture material appeared as a prompt containing both the target grade and the learning goal.