• Journal of Life Science
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• v.18 no.4
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• pp.565-571
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• 2008

Due to rapid development of bioinformatics technologies, various biological data have been produced in silico. So now days complicated and large scale biodata are used to accomplish requirement of researcher. Developing visualization and annotation tool using them is still hot issues although those have been studied for a decade. However, diversity and various requirements of users make us hard to develop general purpose tool. In this paper, I propose a novel system, Genome Viewer and Annotation tool (GenoVA), to annotate and visualize among genomes using known information and multiple relation graph. There are several multiple alignment tools but they lose conserved area for complexity of its constrains. The GenoVA extracts all associated information between all pair genomes by extending pairwise alignment. High frequency conserved area and high BLAST score make a block node of relation graph. To represent multiple relation graph, the system connects among associated block nodes. Also the system shows the known information, COG, gene and hierarchical path of block node. In this case, the system can annotates missed area and unknown gene by navigating the special block node's clustering. I experimented ten bacteria genomes for extracting the feature to visualize and annotate among them. GenoVA also supports simple and rough computational annotation of new genome.

• Journal of KIISE:Software and Applications
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• v.26 no.11
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• pp.1314-1323
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• 1999

컴퓨터의 사용이 일반화됨에 따라 데이타를 생성하고 수집하는 것이 용이해졌다. 이에 따라 데이타로부터 자동적으로 유용한 지식을 얻는 기술이 필요하게 되었다. 데이타 마이닝에서 얻어진 지식은 정확성과 이해성을 충족해야 한다. 본 논문에서는 데이타 마이닝을 위하여 퍼지 결정트리에 기반한 효율적인 퍼지 규칙을 생성하는 알고리즘을 제안한다. 퍼지 결정트리는 ID3와 C4.5의 이해성과 퍼지이론의 추론과 표현력을 결합한 방법이다. 특히, 퍼지 규칙은 속성 축에 평행하게 판단 경계선을 결정하는 방법으로는 어려운 속성 축에 평행하지 않는 경계선을 갖는 패턴을 효율적으로 분류한다. 제안된 알고리즘은 첫째, 각 속성 데이타의 히스토그램 분석을 통해 적절한 소속함수를 생성한다. 둘째, 주어진 소속함수를 바탕으로 ID3와 C4.5와 유사한 방법으로 퍼지 결정트리를 생성한다. 또한, 유전자 알고리즘을 이용하여 소속함수를 조율한다. IRIS 데이타, Wisconsin breast cancer 데이타, credit screening 데이타 등 벤치마크 데이타들에 대한 실험 결과 제안된 방법이 C4.5 방법을 포함한 다른 방법보다 성능과 규칙의 이해성에서 보다 효율적임을 보인다.Abstract With an extended use of computers, we can easily generate and collect data. There is a need to acquire useful knowledge from data automatically. In data mining the acquired knowledge needs to be both accurate and comprehensible. In this paper, we propose an efficient fuzzy rule generation algorithm based on fuzzy decision tree for data mining. We combine the comprehensibility of rules generated based on decision tree such as ID3 and C4.5 and the expressive power of fuzzy sets. Particularly, fuzzy rules allow us to effectively classify patterns of non-axis-parallel decision boundaries, which are difficult to do using attribute-based classification methods.In our algorithm we first determine an appropriate set of membership functions for each attribute of data using histogram analysis. Given a set of membership functions then we construct a fuzzy decision tree in a similar way to that of ID3 and C4.5. We also apply genetic algorithm to tune the initial set of membership functions. We have experimented our algorithm with several benchmark data sets including the IRIS data, the Wisconsin breast cancer data, and the credit screening data. The experiment results show that our method is more efficient in performance and comprehensibility of rules compared with other methods including C4.5.

• Journal of the Korea Academia-Industrial cooperation Society
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• v.9 no.3
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• pp.664-673
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• 2008

Recently, the ubiquitous is handled by maximum topic. New knowledge information and ubiquitous computing evolution have promoted new paradigm transfer and grand change. Also, need technology as powerful engineering approached fairly system and educational guidance side examination necessarily to overcome u-Learning base situation and studying obstacle situations. This treatise embodied handiness examination about attention shortage and excess obstacle (Attention Deficit Hyperactivity Disorder, low ADHD) who must solve so as to be square and level being increase trend in primary school using USB (Universal Serial Bus) terminal system that allow fetters to OSGi (Open Service Gateway Initiative). That OSGi base USB terminal system is easy preservation of information, safety of network, cost-cutting and maintenance by various ubiquitous system that server that load many USB terminals and OSGi uses an USB bus of high speed and construct network, there is advantage of concentration elevation and so on of week and ADHD handled in this treatise because early diagnosis and treatment are serious. The confirmed system application that can supplement paper and pens examination's shortcoming and could solve examination's problem which use computer, and help in student guidance through ADHD simpleexamination who utilize OSGi base USB terminal system. Is available by game system that system for human nature examination or intelligence test and general exam explaining and level studying, order style question investigation program, studying system for disabled person, majority that enforce in public in school this study finding does together.

• Journal of the Korea Academia-Industrial cooperation Society
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• v.17 no.9
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• pp.647-654
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• 2016

In the defense industry, national security takes priority over economic sense and this has translated into high cost and long-term research and development. However, the exponential growth of technology and rapid changes in the security situation in recent years have resulted in a call for the development of systems at a low cost within a short period of time. In order to implement a modularization strategy in the field of defense, the introduction of line replaceable units in OO systems needs to be prioritized. This study selects six criteria following a literature review and prioritizes 11 modules for OO systems using the project evaluation method, Grey Relational Analysis (GRA). Based on the GRA results, the grey relational grades were derived as 0.83, 0.81 and 0.80 for the M11 (Main board), M8 (EMI module), M3 (Single board computer) modules, respectively. The cost and time of development is expected to be reduced in accordance with the grey relational grade. The results of this research could be utilized for decision making on adopting modularization in similar system development or product improvement programs (PIPs).

• Journal of the Institute of Convergence Signal Processing
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• v.16 no.4
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• pp.139-148
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• 2015

In this paper, the optimum coding method is proposed by using open library in order to improve the performance of a software correlator developed for Korea-Japan Joint VLBI Correlator(KJJVC). The correlation system for VLBI observing system is generally implemented with hardware using ASIC or FPGA because the computational quantity is increased geometrically according to the participated observatory number. However, the software correlation system is recently constructed at a massive server such as a cluster using software according to the development of computing power. Since VLBI correlator implemented with hardware is able to conduct data processing with real-time or quasi real-time compared with mostly observational time, software correlation has to perform optimal data processing in coding work so as to have the same performance as that of the hardware. Therefore, in this paper, the experimental comparison was conducted by open-source based fftw library released in FFT processing stage, which is the most important part of the correlator system for performing optimum coding work in software development phase, such as general method using fftw library or methods using SSE(Streaming SIMD Extensions), shared memory, or OpenMP, and method using merged techniques listed above. Through the experimental results, the proposed optimum coding method for improving the performance of developed software correlator using fftw library, shared memory and OpenMP is effectively confirmed by reducing correlation time compared with conventional method.

• Journal of KIISE:Computing Practices and Letters
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• v.11 no.5
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• pp.436-450
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• 2005

Existing B2B, B2C computer systems and applications that executed business trans-actions were the client- server based architecture which consists of heterogeneous hardware and software including personal computers and mainframes. Due to the active boom of electronic business, integration and compatibility of exchanged data, applications and hardwares have emerged as hot issue. This paper designs and implements a message transport system and a document transformation system in order to solve the interoperability problem of integrated logistics system in e-Business when doing electronic business. Message transport system integrated ebMS 2.0 which is standard business message exchange format of ebXML, the international standard electronic commerce framework, and JMS of J2EE enable to ensure reliable messaging. The document transformation system could convert non-standard XML documents into standard XML documents and provide the web services after integrating message system. Using suggested business scenario and various test data, our message oriented system preyed to be interoperable and stable. We participated ebXML messaging interoperability test organized by ebXML Asia Committee ITG in oder to evaluate and certify the suitability for message system.

• KIPS Transactions on Computer and Communication Systems
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• v.6 no.8
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• pp.343-352
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• 2017

IEC62541, known as OPC-UA, is a standard communication protocol for Smart Grid (SG) and Smart Factory application platform. It was accepted as an IEC standard (IEC62541) in 2011 by IEC TC57, and is extending range of application as collaborating with other standrads. The government's policies to popularize EVs ("Workplace Charging Challenge"), the number of Electric vehicle which try to be charging in the factory is expected to increase. In this situation, indiscreet and uncontrolled EV charging can lead to some problems, such as excess of the peak demand capacity. Therefore, EVs, which is charging in SFs, must be monitoring and controlling to avoid and reduce peak demand. However, the standards for EVs charging differ from the standards for SFs. In other words, to increase the ease of use for drivers, and reduce risk for enterprise, we have needs of study to develop the protocols or to provide interoperability, for EVs charging in SFs. This paper deals with a EV charging management platform installing in a smart factory. And this platform can be easily integrated as part of SF management software. The main goal of this paper is to implement EV management system based on IEC61851 and IEC62541.

• KIPS Transactions on Computer and Communication Systems
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• v.3 no.10
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• pp.383-392
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• 2014

The research for coatings is one of the most popular and active research in the polymer industry. For the coatings, electronics industry, medical and optical fields are growing more important. In particular, the trend is the increasing of the technical requirements for the performance and accuracy of the coatings by the development of automotive and electronic parts. In addition, the industry has a need of more intelligent and automated system in the industry is increasing by introduction of the IoT and big data analysis based on the environmental information and the context information. In this paper, we propose an optimization model for the design of experiments based coating formulation data objects using the Internet technologies and big data analytics. In this paper, the coating formulation was calculated based on the best data analysis is based on the experimental design, modify the operator with respect to the error caused based on the coating formulation used in the actual production site data and the corrected result data. Further optimization model to correct the reference value by leveraging big data analysis and Internet of things technology only existing coating formulation is applied as the reference data using a manufacturing environment and context information retrieval in color and quality, the most important factor in maintaining and was derived. Based on data obtained from an experiment and analysis is improving the accuracy of the combination data and making it possible to give a LOT shorter working hours per data. Also the data shortens the production time due to the reduction in the delivery time per treatment and It can contribute to cost reduction or the like defect rate reduced. Further, it is possible to obtain a standard data in the manufacturing process for the various models.

• KIPS Transactions on Computer and Communication Systems
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• v.3 no.10
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• pp.357-364
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• 2014

The first mission for the IoT based hyper-connectivity communication is developing a device-to-device communication technique in infra-less low-power and lossy networks. In a low-power and lossy wireless network, IoT devices and routers cannot keep the original path toward the destination since they have the limited memory. Different from the previous light-weight routing protocols focusing on the reduction of the control messages, the proposed scheme provides the light-weight IPv6 address auto-configuration, IPv6 neighbor discovery and routing protocol in a IoT capable infra-less wireless networks with the bloom filer and enhanced rank concepts. And for the first time we evaluate our proposed scheme based on the modeling of various probability distributions in the IoT environments with the lossy wireless link. Specifically, the proposed enhanced RPL based light-weight routing protocol improves the robustness with the multi-paths locally established based on the enhanced rank concepts even though lossy wireless links are existed. We showed the improvements of the proposed scheme up to 40% than the RPL based protocol.

• KIPS Transactions on Computer and Communication Systems
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• v.3 no.10
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• pp.311-322
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• 2014

IoT(Internet of Things) is a concept of connected internet pursuing direct access to devices or sensors in fused environment of personal, industrial and public area. In IoT environment, it is possible to access realtime data, and the data format and topology of devices are diverse. Also, there are bidirectional communications between users and devices to control actuators in IoT. In this point, IoT is different from the conventional internet in which data are produced by human desktops and gathered in server systems by way of one-sided simple internet communications. For the cloud or portal service of IoT, there should be a file management framework supporting systematic naming service and unified data access interface encompassing the variety of IoT things. This paper implements a DB-based virtual file system maintaining attributes of IoT things in a UNIX-styled file system view. Users who logged in the virtual shell are able to explore IoT things by navigating the virtual file system, and able to access IoT things directly via UNIX-styled file I O APIs. The implemented virtual file system is lightweight and flexible because it maintains only directory structure and descriptors for the distributed IoT things. The result of a test for the virtual shell primitives such as mkdir() or chdir() shows the smooth functionality of the virtual file system, Also, the exploring performance of the file system is better than that of Window file system in case of adopting a simple directory cache mechanism.