• Title/Summary/Keyword: 집단유전학

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A Study on Genetic Algorithm and Stereo Matching for Object Depth Recognition (물체의 위치 인식을 위한 유전 알고리즘과 스테레오 정합에 관한 연구)

  • Hong, Seok-Keun;Cho, Seok-Je
    • Journal of Navigation and Port Research
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    • v.32 no.5
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    • pp.355-361
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    • 2008
  • Stereo matching is one of the most active research areas in computer vision. In this paper, we propose a stereo matching scheme using genetic algorithm for object depth recognition. The proposed approach considers the matching environment as an optimization problem and finds the optimal solution by using an evolutionary strategy. Accordingly, genetic operators are adapted for the circumstances of stereo matching. An individual is a disparity set. Horizontal pixel line of image is considered as a chromosome. A cost function is composed of certain constraints which are commonly used in stereo matching. Since the cost function consists of intensity, similarity and disparity smoothness, the matching process is considered at the same time in each generation. The LoG(Laplacian of Gaussian) edge is extracted and used in the determination of the chromosome. We validate our approach with experimental results on stereo images.

Genetic and morphological divergence of Euphorbia esula and E. maackii in Korea (Euphorbiaceae) (한국산 흰대극(Euphorbia esula)과 섬흰대극(E. maackii)의 유전적, 형태적 분화)

  • Jung, Han-Jin;Park, Ki-Ryong
    • Korean Journal of Plant Taxonomy
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    • v.42 no.4
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    • pp.267-274
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    • 2012
  • To understand morphological and genetic differentiation between Euphorbia esula and E. maackii we examined 12 morphological characters and 11 isozyme loci from 14 populations of two species. Species of E. esula complex (A = 1.63, P = 44.83, $H_e$ = 0.198) in Korea maintain nearly as high as the genetic diversity reported in East Asian E. jolkinii and E. fauriei while lower than those of E. ebracteolata and E. pekinensis in Korea. Although the ranges of most morphological character variation of the two species overlap, E. esula and E. maackii were well recognized by the combination of the morphological traits, and the result of UPGMA phenogram supports the two distinct species inhibited in Korea. However, isozyme data do not support the recognition of E. esula and E. maackii. The discordance between morphological and allozyme data should be explained by the recent divergence or gene flow via introgressive hybridization between two species.

Inheritance of Days to Heading, Spikelet Number and Fertility under Cold Water Treatment in Rice (냉수처리답에서 벼의 출수일수, 영화수 및 임실률의 유전)

  • 예종두
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.41 no.1
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    • pp.45-52
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    • 1996
  • This study was conducted to know how cold tolerance of rice is inherited. Several crosses were made between cold tolerant and susceptible varieties, and their progenies were evaluated for days to heading, spikelet number per panicle and spikelet fertility under both cold water and natural conditions. In F$_1$ and F$_2$ generations, earlier heading, more number of spikelet per panicle and higher spikelet fertility under the cold condition were dominance, and less delay or reduction in heading days and spikelets per panicle by cold treatment were over dominance or partial dominance, while less reduction in spikelet fertility by cold-water irrigation was complete dominance. Heritability in most characters by cold treatment was high and there was less difference of heritabilities in heading days and spikelets per panicle between cold treatment and natural conditions, while there was much difference of heritability in spikelet fertility between two conditions. Heterosis in spikelet fertility was considerably high, while those in heading days and spikelets per panicle were relatively low. Heterosis in remote crosses was especially larger under the cold-water treatment condition compare with that under natural condition.

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Genetic Diversity of Rice Collections using Subspecies-specific STS Markers (아종특이적 STS 마커를 이용한 벼 품종의 유전다양성 분석)

  • Kim, Bong-Song;Jiang, Wenzhu;Koh, Hee-Jong
    • Korean Journal of Breeding Science
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    • v.41 no.2
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    • pp.101-105
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    • 2009
  • Rice (Oryza sativa L.), the world's most important crop, is usually classified into ssp. indica and japonica based on morpho-physiological traits. In the previous study, we have developed subspecies-specific STS markers (SS markers) to readily discriminate between indica and japonica in O. sativa. In this study, we employed SS markers to investigate the genomic inclination of worldwide collections of O. sativa. A total of 320 varieties were divided into two groups with 63 SS markers. Namely, they formed two distinctive groups, indica and japonica, as expected by their geographic origin. The population structure analysis revealed that the variability of genetic background was greater in indica than in japonica. Some of them, however, exhibited intermediate genomic inclination between indica and japonica. These results are in general agreement with the previous studies, suggesting that SS markers are powerful tools for both determination of subspecies genome and assessment of genetic diversity in rice.

Origin of the Korean Mandarin Fish, Siniperca scherzeri and Its Molecular Phylogenetic Relationships to Other Siniperca Fishes (한국산 쏘가리의 기원과 분자계통진화적 위치)

  • Kim, Maeng-Jin;Song, Choon-Bok
    • Korean Journal of Ichthyology
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    • v.23 no.2
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    • pp.95-105
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    • 2011
  • To explain the origin of the Korean mandarin fish (Siniperca scherzeri), phylogenetic relationships and DNA polymorphism among Siniperca fishes have been investigated based on mitochondrial cytochrome b DNA sequences. As a result, S. roulei were firstly differentiated early in the evolution of Siniperca fishes and the other six species (S. schezeri, S. undulata, S. fortis, S. obscura, S. knerii and S. chuatsi) were evolved slightly later. However, the order of species differentiation among six species was not clear because the nodes of their phylogeny were poorly resolved. The constructed molecular phylogeny revealed three genetically distinct groups of local populations of S. scherzeri. The first group (group 1) is the local populations of Korean peninsula and northern China including Lioaning and Henan. The second one (group 2) is the local populations of Anhui, Fujian and Guangxi. The third one (group 3) is the local population of Zhejiang. The number of nucleotide differences in base pairs were 31~43 between group 1 and 2; 37~44 between group 2 and 3; 27~29 between group 1 and 3; and 1~5 within group 1. Thus, the Korean mandarin fish was likely to be originated from the northern China local population which was isolated from the middle or southern China local populations during the Cenozoic Pliocene. Low level of sequence divergence between Korean mandarin fish populations and northern China population indicated a recent expansion of distribution ranges from northern China to Korean peninsula.

Analysis of phylogenetic relationship among Korean Pinellia Tenore (Araceae) using RAPD markers (RAPD markers에 의한 한국산 반하속 식물의 유연관계 분석)

  • Tae, Kyoung-Hwan;Kim, Dong-Kap;Kim, Joo-Hwan
    • Korean Journal of Plant Taxonomy
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    • v.35 no.3
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    • pp.161-174
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    • 2005
  • In order to presume the relationships between two species of P. ternata and P. tripartia, and their populations of the Korean Pinellia, RAPD analysis was performed. The length of the amplified DNA fragments ranged from 300 to 2,500bp. Seventy scorable RAPD makers were found from the PCR reactions with 7 random oligoprimers and were analyzed by Nei-Li's genetic coefficient. Also, some regional groups instead of same taxa were clustered from the phenogram of UPGMA analysis and NJ tree. Populations within each species were clustered at low genetic distance, there had the closed relationship. According to the regional individuals, Pinellia ternata was showed the variation pattern of morphological (leaf shape and flower color) and cytological characters(somatic chromosome numbers). So we suggested to difference of characteristic variety based on variety of habitat. According to this study, new species (Pinellia sp.) was affiliated with Pinellia and had the closest relationship with Hallasan and Japan population. The RAPD data was very useful to define the genetic variation and to discuss the relationships among the intraspecific taxa and their populations of the Korean Pinellia.

Estimation of Genetic Gains in Commercial Layer Breeding Population (상업용 난용종계 집단에서의 유전적 개량량 추정에 관한 연구)

  • 오봉국;최연호
    • Korean Journal of Poultry Science
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    • v.17 no.4
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    • pp.243-254
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    • 1990
  • This study was carried out to investigate the effectiveness of the selection for commercial populations of layer chickens subjected to multiple objectives. For that purpose, predicted selection responses obtained from estimated genetic parameters and observed values were compared. Data for two layer pure lines, Line-w(Single Comb White Leghorn) and Line-B (brown layer) which have been maintained at the Mani Breeding Farm were collected from 1980 to 1985 during 5 generations. The annual genetic gains were estimated by the moth of selection index in retrospect on the basis of selection differentials, phenotypic and genetic variance-covariance for the traits considered. SM was found to be shorten by 1.67 days and 1.14 days per generation in Line-W and Line-B. EN300 and EN400 were found to be increased by 4.15 and 5.92 per generation in Line-W and 257 and 3.73 per generation in Line-B. The annual gains realized were found to be significantly different from expected gains predicted on the basis of the annual selection differentials and genetic parameters in later generations, but it could not be concluded that the differences were attributed to genetic effects.

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A Systematic Relationship of the Korean Symplocaceae Based on RAPD analysis (RAPD에 의한 한국산 노린재나무과 식물의 유연관계 분석)

  • Park, Sang-Hong;Lee, Joongku;Kim, Joo-Hwan
    • Korean Journal of Plant Taxonomy
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    • v.37 no.3
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    • pp.225-237
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    • 2007
  • In order to estimate the genetic relationships among four taxa of Korean Symplocaceae and their regional populations, RAPDs analysis was performed. The length of the amplified DNA fragments ranged from 150 to 1,900 bp. Ninety-two RAPD bands were scored for 11 primers and the genetic distance was calculated with by Nei-Li's genetic dissimilarity. Deciduous and evergreen groups were clearly separated in the UPGMA analysis. Symplocos coreana was clustered as a distinct group, and S. sawafutagi and S. tanakana were also clustered at specific level, respectively. The RAPD data was useful to cognize the genetic variation and to discuss the relationships among Korean Symplocaceae

The Researches on the Korean Population Genetics: Studies on the frequencies and distributions of some human enzyme deficient traits

  • Lee, Chung-Choo
    • The Korean Journal of Zoology
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    • v.17 no.4
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    • pp.145-158
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    • 1974
  • The present paper is concerned with the frequencies of G-6-PD deficiency acetylator phenotypes, hypocatalasemia and acatalasemia among Korean populations. The examination was carried out in the rural (Kyodong island, Moonmak Myeon and Yangyang Eup)and urban (Seoul) areas. The average frequency of G-6-PD deficiency in the total male population was 1.33%. A significant difference was observed among four areas. Tests on the color-blindness were performed in order to compara the two populations(Kyodong island and Seoul) and to obtain relationship between the color-blindness and G-6-PD deficiency. The frequency of color-blindness was 5.76% in the male rural population, and this rate was nearly consistant with that of the urban. The frequencies of the slow acetylator phenotype were 12.96% in Kyodong island, 10.36% in Seoul and 11.05% in Moonmak Myeon. Of the 3,004 persons investigated, no one has acatalasemia, but 10 cases of hypocatalasemia were found. The overall frequency was 0.33% which is slightly different from one area to another; 0.29% in Seoul, 0.27% in Kyodong island, and 1.15% in Moonmak Myeon.

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Species Identification and Genetic Structure of Octopus minor from Korea and China on the Basis of Partial Sequences of Mitochondrial Cytochrome Oxidase I (미토콘드리아 Cytochrome Oxidase I 유전자 마커에 의한 한국.중국 낙지의 종판별 및 집단분석)

  • Kang, Jung-Ha;Yu, Ki-Hwan;Kim, Sang-Kyu;Park, Jung-Yeon;Kim, Bong-Seok;An, Chel-Min
    • The Korean Journal of Malacology
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    • v.26 no.4
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    • pp.285-290
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    • 2010
  • The nucleotide sequences of the mitochondrial cytochrome oxidase subunit 1 (CO1) gene of octopus groups collected from Muan, Taean, Yesu, Jeju in Korea and Youngsung, Daeryen in China were analyzed for the identification of species and populations. Six haplotypes were identified from the analyzed 60 individuals. All of the individuals (N = 10) from Jeju showed the A haplotype which was not observed from other groups, and could be classified as a distinct group. The analyzed groups could form two separate clade in MEGA4 analysis. The individuals from Muan, Taean, Yesu in Korea and Daeryen in China form a clase and the others from Jeju in Korea and Youngsung in China formed the other clade. The analysis of relationship among the groups showed the same results. Individuals belong to the group A (Muan, Taean, Yesu and Daeryen) showed closer relationship than individuals belong to the group B (Jeju and Youngsung). Although the CO1 universal primers used in this study was useful as a marker for species identification among Octopus, analysis of population was limited because of few variations in the partial sequences of CO1 analyzed in this study. However, it was possible to show the limited gene flow among the groups which is resulted from the spatial separation and differences in their habitats.