• Journal of the Korean Society of Groundwater Environment
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• v.2 no.2
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• pp.85-92
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• 1995

This study was conducted to find out the relationship between microflora in groundwater and its physico-chemical environmental factors at the 59 sites, where distributed at 3 cities and 18 counties in Jeonranam-Do, Korea. The average values of environmental factors were as followings; pH 6.9, temperature 20.1 $^{\circ}C$, dissolved oxygen 6.5 mg/1, the depth of wells 80.1 m, and nitrate 10.7 mg/1. The average value of microbial population size; Heterotrophic bacteria-NA (HPC-NA) and heterotrophic bacteria-YEPD (HPC-YEPD) were 1.4${\times}$10$^3$CFU/ml and 0.59${\times}$10$^3$ CFU/ml respectively HPC-YEPD numbers were 42.1% of HPC-YEPD. Coliform bacteria were detected at 16 sites, and its average numbers were 6.7 CFU/ml. General fungi were detected at 14 sites, and its had average numbers were 3.9 CFU/ml. The correlation coefficient was calculated value as relation index between the microbial population sizes and environmental factors in groundwater. In case of HPC-NA, the correlation coefficient value with dissolved oxygen was 0.087 But it showed negative correlation coefficient with other factors. In case of HPC-YEPD, the correlation coefficient value with pH, temperature and nitrate were 0.0957, 0.0019 and 0.0151 respectively. It was concluded that the population size of HPC-NA were influenced by the order of temperature, dissolved oxygen, pH and the depth of wells and that HPC-YEPD were influenced by the order of pH, dissolved oxygen, nitrate, the depth of wells and temperature.

• Journal of Life Science
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• v.20 no.12
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• pp.1743-1749
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• 2010

A research group demonstrated that the 37 kDA protein of Edwardsiella tarda, a causing causative agent of edwardsiellosis in fish, exhibited high antigenicity in Japanese flounder. The research group also showed that the N-terminus amino acid sequences of the 37 kDa protein were mapped to the N-terminus of GAPDH (glyceraldehyde-3-phosphate dehydrogenase). Using degenerated primer sets based on the known N-terminus sequence, the corresponding E. tarda DNA was amplified and cloned. The nucleotide sequences of the cloned gene revealed high homology with a bacterial gene for GAPDH, as we was expected. The amino acid sequence of E. tarda GAPDH (etGAPDH) revealed a <70% similarity with GAPDH proteins in other Enterobacteriaceae. With the application of artificial protein overexpression system in Escherichia coli, the recombinant etGAPDH (rGAPDH) was produced and purified. In this study, Using the purified rGAPDH, the etGAPDH specific polyclonal antibody has been was generated using the purified rGAPDHin this study. The immunoblotting analyses demonstrated that the location of the GAPDH protein is located with the association of is associated with the envelops of E. tarda. The rGAPDH was administrated into Japanese flounder via IP route for evaluation of the protective ability. Although the specific antibody titer against etGAPDH was increased about 3-fold after 4 weeks post-vaccination, the survival rates of vaccinated Japanese flounder and the control group with wild type E. tarda was were 12.5% and 0%, respectively. Our results indicated that rGAPDH is immunoreactive antigen but that it will not generate protective immunity in Japanese flounder.

• The Korean Journal of Malacology
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• v.15 no.1
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• pp.49-55
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• 1999

Mass mortality of the horned turban shell, Batillus cornutus was investigated using histological and bacteriological methods. Some pathogenic bacteria were isolated from mortal or inactive individuals. The pathogenic agents causing mortality of the horned turban shells were as Vibrio alginolyticus and V. anguillarum. Laboratory experiment indicated that optimal growth temperature of two bacteria was 25 to 30$^{\circ}C$ and 3% of NaCl. Histological examination of the horned turban shells showed that gill necrosis is one of the major symptom of infected individuals. It was believed that sudden increase of those two bacterial agents due to environmental change cause mortality of horned turban shells.

• Journal of Life Science
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• v.11 no.6
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• pp.554-560
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• 2001

For development of functional food, antibacterial effect of Poncirus trifoliata juice was examined. Strong antibacterial activities of Poncirus trifoliata juice were observed aginst Gram positive and negative pathogenic bacteria such as Baillus cereus, Bacillus subtilis, Corynebacterium zerosis, Listeria monocytogenes, Micrococcus luteus, Rhodococcus equi, Klebsiella pneumoniae, Pseudomonas aeruginosa, Vibrio alginolyticus, Vibrio cholerae, Vibrio parahaemolyticus, Vibrio vnlnificus and Yersinia enterocolitica. The minimum inhibitory concentration(MIC) of Poncirus trifoliata juice against Bacillus cereus. Listeria monocytogenes, Micrococcus luteus, Rhodococcus equi, Staphylococcus epidermidis, Citrobacter freundil and Pseudomonas aeruginosa was 2.5% and the MIC against Vibrio cholerae, Vibrio parahemolyticus, Vibrio vulnificus and Yersinia enterocolitica was 1.25%. Also, antibacterial activities of Poncirus trifoliata juice treated for 15 min at 121$^{\circ}C$ were confirmed to be stable.

• KSBB Journal
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• v.24 no.1
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• pp.9-16
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• 2009

Chemotaxis is the movement of an organism toward chemical attractant and away from chemical repellents. Several bacteria are known to cometabolically degrade some pollutants and attracted to the pollutants. The chemotactic responses to these compounds influence the efficiency of bioremediation because the first precondition of pollutant degradation is definitely confrontation between microorganisms and pollutants. In this review, we summarize present knowledge of about the chemotactic mechanism to environmental pollutants of Pseudomonas species.

• Korean Journal Plant Pathology
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• v.12 no.4
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• pp.381-388
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• 1996

맥류세균성 줄무늬병균의 선택배양기(KM-1)를 개발하여 이병식물체 및 토양으로부터 Xanthomonas campestris pv. translucens를 선택적으로 분리할 수 있는 효율성을 검토하였다. KM-1배양기의 구성성분은 증류수 1 L당 lactose 10 g, D(+)trehalose 4.0 g, thiobarbituric acid 0.2 g, K\ulcornerHPO\ulcorner 및 KH\ulcornerPO\ulcorner 각각 0.8 g, yeast extract 30 mg, NH\ulcornerCl 1 g, cycloheximide 100 mg, tobramycin 8.0 mg, ampicillin 1.0 mg 및 Bacto agar 15 g이며 1 N NaOH로 pH 6.6으로 조절하였다. X. c. t.의 균주별 KM-1의 배양효율은 비선택성 농후배지인 Wilbrinks agar에 비하여 1.30정도였으며, 기타 토양전염성식물병원세균 Agrobacterium tumefaciens, Agrobacterium rhizogenes, Erwinia carotovora var. atroseptica, Erwinia carotovora var. carotovora, Corynebacterium insidiosum, 및 기타 토양생존 부생세균 Bacillus cereus, Pseudomonas aeruginosa, Pseudomonas fluorescens, and Pseudomonas putida 등의 생장을 완벽하게 억제하였다. KM-1의 저장기간(shelf-life)도 5$^{\circ}C$에서 2개월 동안 선택성을 유지하였다. 따라서 본 병원균의 전염원의 생존 등 발생생태연구에 활용될 수 있는 가치가 충분히 인정되었다.

• Journal of the Korean Society of Groundwater Environment
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• v.2 no.1
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• pp.22-29
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• 1995

Mobile bacterial particles can act as carriers and enhance the transport of hydrophobic contaminants in ground water by reducing retardation effects. Because of their colloidal size and favorable surface conditions, bacteria can act as efficient contaminant carriers. When such carriers exist in a porous medium, the system can be thought of as three phases: an aqueous phase, a carrier phase, and a stationary solid matrix phase. Contaminant can be present in either or all of these phases. In this study, a mathematical model based on mass balances is developed to describe the transport and fate of biodegradable contaminant in a porous medium. Bacterial mass transfer mechanism between aqueous and solid matrix phases, and contaminant mass transfer between aqueous and bacterial phases are represented by kinetic models. Governing equations are non-dimensionalized and solved to analyze the bacteria facilitated contaminant transport. The numerical results of the facilitation effect match favorably with experimental data reported in the literature. Results show that the contaminant transport can be described by local equilibrium assumption when Damkohler numbers are larger than 10. Significant sensitivities to model parameters, particularly bacterial growth rate and influent bacterial concentration, were discovered.

• Korean Journal of Microbiology
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• v.36 no.2
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• pp.136-141
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• 2000

The temporal variation of bacterial community and environmental factors, affecting on bacterial community structure were estimated monthly kom April, 1998 to May, 1999. Bacterial community structures were determined by in situ hyblidization with rRNA-targeted fluorescently labeled oligonucleotide probes (FISH) and epifluorescence microscopy; and the statistical analysis was done by SPSS program. The oligonucleotide probes used in this study were EUB338, ALFlb, GAM42a, and CF. In surface water, $\alpha$-group was related to only DOC (-0.538, p<0.05) and Chlorophyll a concentration was related to y-group (-0.630, p$\beta$-group and Cytophaga-Flavobacterium group were related to water temperature as 0.665, and 0.685 @<0.05). Between pH and $\beta$-group, there was a positive relationship (0.541, p<0.05), and Cytophaga-Flavobactevizim group was represent to correlation (0.672, p

• Journal of Periodontal and Implant Science
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• v.33 no.2
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• pp.127-137
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• 2003

치과용 임플란트 실패의 주요 원인은 임플란트 표면에 부착되는 세균의 침착의 결과로 생기는 임플란트 주위염이다. 구강 내에서 세균성 치태의 침착은 치태가 부착하는 기질 표면의 물리적 성상과 타액성 피막의 성분에 영향을 받으며 형성된 피막의 유기질 성분의 차이가 치태의 성분과 병원성에 영향을 미친다. 최근 연구에 의하면 생체재료의 표면에 침착되는 치태세균은 사용되는 재료에 따라 특이한 세균 침착을 보이며 이는 초기 타액성 피막의 차이에 의한 것으로 알려져 있다. 이 연구의 목적은 플라즈마분사법으로 표면 처리된 타이태늄 임플란트에 흡착되는 타액성 단백질 피막의 특성을 정성적인 방법으로 분석하는 데 있었다. 법랑질 조각과 플라즈마분사법으로 표면 처리된 타이태늄 임플란트를 스프린트에 치실을 이용하여 연결한 장치를 구강 내 장착하여 2시간 동안 피막이 침착되게 한 후 피막을 분리 추출하여 냉동 건조시켰다. 재수화 과정을 거치고 나서 전기 영동법과 Western transfer 분석을 통해 단백질 성분에 관한 분석을 시행하였다. 사람의 총 타액과 이하선 타액 및 악하선-설하선 타액을 수집기를 이용하여 채취하고 같은 방법으로 처리한 후 성분분석을 실시하였다. 피막 흡착 전후의 표면변화를 주사전자현미경을 이용하여 관찰하였다. 실험결과 타이태늄 임플란트에 흡착된 피막은 법랑질 표면의 피막과는 다른 단백질 성분을 가지고 있었으며, 주로 악하선-설하선 타액에서 유래하였다. 임플란트와 법랑질 표면 모두에서 흡착된 피막에는 아밀라제, 분비성 면역 글로불린A 및 락토페린이 존재함을 알 수 있었으나 법랑질의 경우는 blotting이 약하게 나타났다. 주사전자현미경 관찰결과 시편의 표면에 균질한 피막이 덮고 있었으며 세균의 부착은 거의 관찰되지 않았다. 이상의 실험 결과들을 통하여 플라즈마분사법으로 표면 처리된 타이태늄 임플란트 표면에 부착된 타액성 단백질 성분은 법랑질과는 차이가 있음을 알 수 있었으며, 이러한 차이는 치태세균의 종류 및 병원성에 영향을 미칠 것으로 생각된다. 법랑질과 타이태늄 임플란트는 기질과 표면구조가 다르므로 표면에 형성 되는 치태성분도 다르다는 사실과 본 연구 결과를 종합하여 볼 때, 타이태늄 임플란트 표면에 흡착되는 초기 타액성 단백질의 성불이 타이태늄 표면에 침착되는 미생물 군의 조절에 중요한 역할을 가지고 있으며, 임플란트 치료 시에 올바른 치태 관리법의 교육을 통하여 환자 스스로 적절한 관리를 하도록 함으로써 임플란트 치료의 성공률을 높일 수 있을 것으로 생각된다.

• Microbiology and Biotechnology Letters
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• v.37 no.4
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• pp.340-349
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• 2009

A CJ9 bacterial strain, which showed antifungal and antibacterial activities, was isolated from meju and identified as Bacillus polyfermenticus based on Gram staining, biochemical properties, as well as its 16S rRNA sequence. B. polyfermenticus CJ9 showed the antimicrobial activity against the various pathogenic molds, yeasts, and bacteria. The antibacterial activity was stable in the pH 5.0~9.0, but the activity was lost at $37^{\circ}C$ for 24 hr. The antifungal activity was stable in the pH range of 3.0~9.0 and reduced at $121^{\circ}C$ for 15 min, but antifungal activity was not completely destroyed. The antibacterial activity was completely inactivated by proteinase K, protease, trypsin, and $\alpha$-chymotrypsin. The antifungal activity was also completely inactivated by protease and $\alpha$-chymotrypsin, and reduced its activity by proteinase which indicated that the antifungal and antibacterial compounds have proteineous nature. The apparent molecular mass of the partially purified antifungal compound, as indicated by using the direct detection method in Tricine-SDS-PAGE, was approximately 1.4 kDa. The molecular mass of the antibacterial compound could not be determined because of its heat-liable characteristic.