• Title/Summary/Keyword: 변이형

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Classification and Genetic Variation Analysis Among Formae Speciales of Fusarium oxysporum by Using Recombinant DNA Probes (재조합 DNA probe에 의한 Fusarium oxysporum 분화형간의 분류 및 유전적 변이 분석)

  • Kim, Young-Tae;Kim, Hong-Gi
    • The Korean Journal of Mycology
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    • v.25 no.4 s.83
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    • pp.362-368
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    • 1997
  • Five formae speciales of Fusarium oxysporum in Korea were examined using RFLP analysis to find the possibility for classification and analyze genetic variations. DNAs from F. oxysporum f. sp. lycopersici, cucumerinum, fragariae, garlic and sesami were used with three recombinant probes such as pFC46, pFC52 and pFC57. Distinct differences among five formae speciales of this fungus were detected in RFLP band patterns based on southern hybridization of genomic DNA using each recombinant clone, which was a repetitive copy probe. Strains belong to four formae speciales could be very stable in genetic variation except f. sp. sesami which has more variation than the others based on the RFLP analysis. They formed their own cluster which has high similarity within the same formae specialis resulted from the UPGMA analysis for genetic relationship analysis and each cluster represented its own formae specialis. The method using three recombinant DNA probes could be a good tool for classification of formae speciales in F. oxysporum.

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Transition of vowel harmony in Korean verbal conjugation: Patterns of variation in a spoken corpus (구어 말뭉치를 통한 한국어 용언활용에서의 모음조화 변이 및 변화 추이 연구)

  • Hijo Kang
    • Phonetics and Speech Sciences
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    • v.15 no.2
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    • pp.21-29
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    • 2023
  • This study investigates the transitional aspect of vowel harmony in Korean verbal conjugation. By observing the patterns of harmonic and disharmonic tokens of 42 verbal stems searched for in the National Institute of Korean Language (NIKL) Korean Dialogue Corpus 2020/2021, I found that disharmonic tokens appeared less than 0.1% of time, most of which consisted of an /a/-stem with a monosyllabic sentence-final suffix. It was noted that disharmonic pattern started to spread to other suffixes and possibly to /o/-stems. A simple perception test showed that the disharmonic forms might have originated from vowel reduction or undershoot. These results suggest that the ongoing change is accounted for from both the articulatory and perceptual perspectives.

Comparison of the Pathogenicity of Infectious Hematopoietic Necrosis Virus Genotypes Isolated from Rainbow Trout in Gangwon Province (무지개송어에서 분리된 IHNV (감염성 조혈 괴사바이러스) 유전자형에 따른 병원성 비교)

  • Lee, Chang-Ju;Kim, Kwang-Il;Han, Yu-Seon;Jegal, Myeong-Eun;Kim, Yung-Jin
    • Journal of Life Science
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    • v.31 no.6
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    • pp.574-580
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    • 2021
  • This study investigated the pathogenicity of different genotypes of infectious hematopoietic necrosis virus (IHNV) strains isolated from infected rainbow trout in Gangwon Province. RtPc0314c and RtPc0314g strains belonging to the JRt-Shizuoka lineage and RtPc0816g strain belonging to the JRt-Nagano lineage showed 100% cumulative mortality when inoculated at a high titer. In addition, more rapid necrosis was observed in rainbow trout infected with RtPc0314c and RtPc0314g mutations. When inoculated at a low titer, 100% mortality was not observed until the end of the experiment, but the mortality was higher in rainbow trout infected with a mutant strain belonging to the JRt-Shizuoka linage than a mutant strain belonging to the JRt-Nagano lineage. A histopathological analysis showed a clear signature of infection in kidney and spleen tissues upon infection with RtPc0314c and RtPc0314g but no signature of infection associated with the Rt03186 strain. Based on the results in this study, it seems that strains belonging to the JRt-Shizuoka lineage in Gangwon Province IHNV are more pathogenic.

Serotype Variations of Agglutinogen and Fimbriae in the Korean Isolates of Bordetella pertussis (국내 Bordetella pertussis 분리균주에서 Agglutinogen과 Fimbriae 혈청형 변이 분석)

  • Jung, Sang-Oun;Moon, Yu-Mi;Sung, Hwa-Young;Kang, Yeon-Ho;Yu, Jae-Yon
    • Korean Journal of Microbiology
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    • v.44 no.3
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    • pp.221-227
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    • 2008
  • Bordetella pertussis is pathogenic bacteria causing pertussis, a infectious respiratory disease for the infants. The incidence rate of pertussis was significantly decreased after introduction of vaccine. However, increased pertussis cases are recently reported in several countries with high vaccine coverage. One of the inferred reasons is genotype or serotype variation between circulating strains and vaccine strains. Therefore, it is required to confirm the variation status of the isolates by genotype or serotype analysis and the possibility of pertussis outbreak in Korea should be estimated. For this, the serotype variations of the isolates from $1999\sim2006$ were investigated in agglutinogen and fimbriae. As the result, the most frequent serotype in the isolated strains was agglutinogen 1 and fimbriae 2 serotypes. Moreover, serotype transition from vaccine serotypes to non-vaccine serotypes was observed. Especially, the transition pattern of agglutinogen serotype was directed to increase a different type (agg 1) from the vaccine type (agg 1,2). However, in case of fimbriae, the same type (fim 2) with vaccine strain was increased. These results were also observed in other countries with increasing incidence of pertussis. For more predictable results to know increasing possibility of pertussis incidence in Korea, the studies on genetic variations of antigenic determinant genes and prevalence of antibody titer in normal population should be performed in the further.

Supporting temporal data using the layered architecture in a Data Warehouse (데이터 웨어하우스에서 계층화 구조를 이용한 시간 데이터의 지원)

  • 신영옥;백두권;류근호
    • Proceedings of the Korean Information Science Society Conference
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    • 1998.10b
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    • pp.389-391
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    • 1998
  • 데이터 웨어하우스에서는 시간에 따라 변화되는 데이터를 관리함으로써 좀더 정확하게 요약화된 정보를 제공할 수 있다. 거의 모든 데이터 웨어하우스는 원시 데이터로 관계형 데이터베이스를 사용하지만, 관계형 데이터베이스는 시간 데이터에 대해 실제적인 지원을 하지 않는다. 그러므로 시간 변이 데이터에 대한 정확한 정보를 얻기가 어렵다. 본 논문에서는 이러한 시간 변이 데이터의 지원이 가능한 시간지원 데이터 웨어하우스를 설계하고자 한다. 이를 위해, 기존의 데이터 웨어하우스에서 원시 데이터로 사용하는 관계형 데이터베이스에 시간지원질의 처리 계층을 결합하는 방법을 보이고, 시간지원 데이터의 간격 시간에 대한 요약화 방법으로 시간지원 집계 트리 전략을 소개한다.

Molecular Variants of the $LH{\beta}$-subunit in Infertile Patients with Polycystic Ovary Syndrome (PCOS) in Korean Women (한국인의 다낭성 난포증후군 불임환자에서 황체형성 호르몬 유전자의 분자변이 연구)

  • Kim, Nam-Keun;Chung, Hyung-Min;Lee, Eu-Gene;Nam, Yoon-Sung;Choi, Dong-Hee;Sohn, Tae-Jong;Lee, Sook-Hwan;Ko, Jung-Jae;Cha, Kwang-Yul
    • Clinical and Experimental Reproductive Medicine
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    • v.27 no.2
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    • pp.173-177
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    • 2000
  • 연구목적: 한국여성의 다낭성 난포증후군 환자에서 황체형성 호르몬 exon 2 유전자의 변이를 탐색하여 이들 변이와 질환과의 관련성 여부를 밝히고자 하였다. 연구재료 및 방법: 21명의 다낭성 난포증후군 환자를 대상으로 황체형성 호르몬 exon 2(Trp8Arg;TGG to CGG and Ile15Thr; ATC to ACC)의 변이를 탐색하였다. 혈액에서 Genomic DNA를 추출하여 PCR로 증폭한 후 RFLP 방법으로 변이형을 구분하였다. 결과: 황체형성 호르몬 exon 2의 변이형이 다낭성 난포증후군 환자에서 28.6%로 이미 조사된 바 있는 대조군의 16.7% 보다 약간 높게 나타났으나 통계적으로 유의한 차이는 없었다(p>0.05). 결론: 황체형성 호르몬 exon 2의 변이가 한국인의 다낭성 난포증후군 발병과 관련이 있는지를 밝히기 위해 더 많은 개체에 대한 연구가 요구된다.

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Clinical Characteristics and Abnormal p53 Expression of Lung Cancer Associated with Multiple Primary Cancer (다발성 악성종양에 동반된 폐암의 임상 특징과 변이형 p53 발현)

  • Shin, Chang-Jin;Park, Hye-Jung;Shin, Kyeong-Cheol;Shim, Young-Ran;Chung, Jin-Hong;Lee, Kwan-Ho
    • Tuberculosis and Respiratory Diseases
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    • v.47 no.3
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    • pp.331-338
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    • 1999
  • Background: Nearly 10% of cancer patients will develop a second primary cancer within ten years after surgical removal of the primary tumor. The detection of risk factors for developing multiple primary tumors would be important This study was conducted to evaluate the clinical characteristics and abnormal p53 expression of lung cancer associated with multiple primary cancer(MPC). Method: Clinical characteristics and abnormal p53 expression were compared between 20 cases of lung cancer(NSCLC ; 16 cases, SCLC ; 4 cases) associated with MPC and 26 cases of primary non-small cell lung cancer. Result: MPC associated with lung cancer was gastric cancer(8), lung cancer(2), esophageal cancer(2), colon cancer(2), laryngeal cancer(1), bladder cancer(1), small bowel cancer(l), adrenal cancer(1), hepatocellular carcinoma(1), and breast cancer (1) in order. The clinical stage of primary NSCLC was relatively advanced, but NSCLC associated with MPC was even distribution at each stage. The detected incidences of abnormal p53 expressions were 62.5% in NSCLC associated with MPC and 76.9% in primary NSCLC(p>0.05). Conclusion: There was no difference in abnormal p53 expression between non-small cell carcinoma associated with multiple primary cancer and primary non-small cell carcinoma.

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A Study on Some Forms that Originated from the Dependent Noun "것" [kət] (의존 명사 '것'으로부터 도출된 몇몇 형식에 대한 고찰)

  • Lee, Eun-Sup
    • Cross-Cultural Studies
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    • v.41
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    • pp.245-273
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    • 2015
  • The purpose of this paper is to investigate the characteristics of some forms, "거" [kə], "게" [ke], and "걸" [kəl], which originated from a dependent noun "것" [kət]. Nowadays, some studies have argued that these forms are allomorphs of "것" [kət]. However, they are not allomorphs because they do not show a complementary distribution with "것" [kət]. Moreover, we should not deal with "게" [ke] and "걸" [kəl] as at the same level of "것" [kət] and "거" [kə] because they respectively consist of "거" [kə], and the subjective case marker "이" [i] or the accusative case marker "ㄹ" [l]. In other words, they function as an element of a sentence. Therefore, just the "거" [kə] and "걸" [kəl] remain to be argued about concerning variation among them. Especially, the "거" [kə] is almost freely alternated with "것" [kət], whereas even though "걸" [kəl], which is not part of KP (N + case marker), is very restricted so as to appear to be from "거" [kə]. Of course, the restriction they show cannot be under the condition that corresponds to the conception of the alternation. In conclusion, only the "거" [kə] is just an optional variation morph of "것" [kət], whereas "걸" [kəl] is an optional variation morph of "거" [kə]. There is no allomorph of "것" [kət] in the forms originated from itself.

Study on the Radial Variation of Structural Element in the Diffuse-Porous Woods (주요산공재(主要散孔材) 구성요소(構成要素)의 방사방향(放射方向) 변동(變動)에 관한 연구(硏究))

  • Han, Cheol-Soo
    • Journal of the Korean Wood Science and Technology
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    • v.15 no.2
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    • pp.26-52
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    • 1987
  • Among the diffuse-porous woods which arc dominant in Korea and used as construction materials due to their wood quality, ten species of six genus involving seven species of three genus in Betulaceae were studied on the radial variation of structural demenb. The species studied were Betula platyphylla var. japonica, B. ermanii, B. davurica, B. scstata, B. schmidtii, Carpinus laxifora, Alnus japonica, Prunus sargentii. Acer mono and Diospyros kaki. Wood fiber, vessel elements and ray increased rapidly in size from pith to a certain annual ring. After then the radial variation in size of the main structural elements seemed to be divided into three types; levelled off curve pattern indicating constant size(type I), continuously increasing curve pattern showing ever increase in size (type II) and parabolic curve pattern showing the gradual decrease after the maximum (type III), but the variation types by structural dements were different even in the same species. Based on the results from this study, it appears to be reasonable to consider the stabilized age of wood fiber, vessel elements and ray rather than considering wood fiber length in distinguishing mature woods from juvenile woods.

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Genetic Characterization of Antigenic Variant Infectious Bursal Disease Virus (IBDV) in Chickens in Korea

  • Jong-Yeol Park;Ki-Woong Kim;Ke Shang;Sang-Won Kim;Yu-Ri Choi;Cheng-Dong Yu;Ji-Eun Son;Gyeong-Jun Kim;Won-Bin Jeon;In-Hwan Kim;Bai Wei;Min Kang;Hyung-Kwan Jang;Se-Yeoun Cha
    • Korean Journal of Poultry Science
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    • v.50 no.4
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    • pp.231-240
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    • 2023
  • Infectious bursal disease (IBD) is an acute, highly contagious, and immunosuppressive disease in young chickens, and causes considerable economic losses to the poultry industry. More than 30 years ago, an antigenic variant IBDV (avIBDV) was reported in chicken farms in the United States. Recently, a novel avIBDV exhibited clear differences in molecular characteristics compared with previous variant strains. This study investigated the molecular characteristics of recently isolated avIBDV strains in Korea. Strains of avIBDV were confirmed by reverse transcription PCR (RT-PCR) and were propagated in 10-day-old specific-pathogen-free (SPF) embryonated chicken eggs through chorioallantoic membrane (CAM) inoculation. Multiple sequence alignment and phylogenetic analyses of hypervariable regions VP2 gene revealed that the strains originated from two different avIBDV lineages (G2a and G2d). In our results, we confirmed the co-existence and prevalence of avIBDV genogroup G2a and G2d in chicken farms. It is necessary to study the protective efficacy of current vaccines against avIBDVs.