• Title/Summary/Keyword: 계층적 클러스터링

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Implementing System for Dynamic Constructing and Clustering on KEGG Pathway Network (KEGG 패스웨이 네트워크 동적 구축 및 클러스터링 시스템 개발)

  • Seo, Dongmin;Lee, Min-Ho;Yu, Seok Jong
    • Proceedings of the Korea Contents Association Conference
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    • 2015.05a
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    • pp.231-232
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    • 2015
  • 최근 유전체학, NGS(Next Generation Sequencing) 기술, IT/NT 장비의 발전 등에 따라 방대한 양의 바이오-메디컬 데이터가 생산되고, 이에 따라 빅데이터를 활용한 헬스케어 산업이 급속히 발달하고 있으며, 이와 관련된 빅데이터 기술은 국민의 건강 증대와 건강한 고령 삶을 제공하는 핵심 기술로 급부상하고 있다. 패스웨이는 단백질, 유전자, 세포 등의 생체적 요소 간의 역학관계 혹은 상호작용 등을 네트워크 형식으로 표현한 생물학적 심층지식으로, 바이오-메디컬 빅데이터 분석에 있어서 널리 활용되고 있다. 하지만 패스웨이는 매우 다양한 형태를 갖고 용량이 매우 큰 빅데이터로 이를 분석하는데 많은 시간이 소요된다. 그래서 본 논문에서는 세계적으로 가장 우수하고 방대한 양의 패스웨이를 제공하는 KEGG 패스웨이 데이터베이스로부터 사용자가 관심 갖는 패스웨이만을 자동 수집하고 패스웨이 간 계층구조를 기반으로 네트워크를 구성 후, 해당 패스웨이 네트워크에 대한 클러스터링과 핵심 패스웨이 선정을 통해 패스웨이 간의 역학관계 또는 상호작용을 직관적으로 분석할 수 시스템을 제안했다.

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The Method of Container Loading Scheduling through Hierarchical Clustering (계층적 클러스티링 방법을 통한 컨테이너 적재순서 결정 방법)

  • 홍동희
    • Journal of the Korea Society of Computer and Information
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    • v.10 no.1 s.33
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    • pp.201-208
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    • 2005
  • Recently, the container terminal requires the study of method to increase efficiency through change of its operation method. Loading plan is a very important part to increase the efficiency of container terminal. Loading Plan is largely divided into two cases, deciding loading location and loading scheduling and this Paper proposes a more efficient method of container loading scheduling. Container loading scheduling is a problem of combination optimization to consider several items of loading location and operation equipments. etc. An existing method of cluster composition that decides the order of container loading scheduling has a restriction to increase the efficiency of work owing to rehandling problem. Therefore, we Propose a more efficient method of container loading scheduling which composes containers with identical attribution, based on ship loading list and yard map, into stack units of cluster, applying to hierarchical clustering method, and defines the restriction of working order. In this process, we can see a possible working path among clusters by defining the restriction of working order and search efficiency will be increased because of restricted search for working path.

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A clustering algorithm based on dynamic properties in Mobile Ad-hoc network (에드 혹 네트워크에서 노드의 동적 속성 기반 클러스터링 알고리즘 연구)

  • Oh, Young-Jun;Woo, Byeong-Hun;Lee, Kang-Whan
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.19 no.3
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    • pp.715-723
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    • 2015
  • In this paper, we propose a context-awareness routing algorithm DDV (Dynamic Direction Vector)-hop algorithm in Mobile Ad Hoc Networks. The existing algorithm in MANET, it has a vulnerability that the dynamic network topology and the absence of network expandability of mobility of nodes. The proposed algorithm performs cluster formation using a range of direction and threshold of velocity for the base-station, we calculate the exchange of the cluster head node probability using the direction and velocity for maintaining cluster formation. The DDV algorithm forms a cluster based on the cluster head node. As a result of simulation, our scheme could maintain the proper number of cluster and cluster members regardless of topology changes.

A Study on Cluster Hierarchy Depth in Hierarchical Clustering (계층적 클러스터링에서 분류 계층 깊이에 관한 연구)

  • Jin, Hai-Nan;Lee, Shin-won;An, Dong-Un;Chung, Sung-Jong
    • Proceedings of the Korea Information Processing Society Conference
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    • 2004.05a
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    • pp.673-676
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    • 2004
  • Fast and high-quality document clustering algorithms play an important role in providing data exploration by organizing large amounts of information into a small number of meaningful clusters. In particular, hierarchical clustering provide a view of the data at different levels, making the large document collections are adapted to people's instinctive and interested requires. Many papers have shown that the hierarchical clustering method takes good-performance, but is limited because of its quadratic time complexity. In contrast, K-means has a time complexity that is linear in the number of documents, but is thought to produce inferior clusters. Think of the factor of simpleness, high-quality and high-efficiency, we combine the two approaches providing a new system named CONDOR system [10] with hierarchical structure based on document clustering using K-means algorithm to "get the best of both worlds". The performance of CONDOR system is compared with the VIVISIMO hierarchical clustering system [9], and performance is analyzed on feature words selection of specific topics and the optimum hierarchy depth.

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A Theoretical Study on Indexing Methods using the Metadata for the Automatic Construction of a Thesaurus Browser (시소러스 브라우저 자동구현을 위한 Metadata를 이용한 색인어 처리방안에 대한 연구)

  • Seo , Whee
    • Journal of Korean Library and Information Science Society
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    • v.35 no.4
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    • pp.451-467
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    • 2004
  • This paper is intended to present the theoretical analyses on automatic indexing, which is vital in the process of constructing a thesaurus browser, and clustering algorithms to construct hierarchical relations among terms as well as the methods for the automatic construction of a thesaurus browser. The methods to select the index term automatically in the web documents are studied by surveying the methods for analyzing and processing metadata which conforms to bibliographical roles of traditional paper documents in web documents. Also, the result of the study suggests to adding or involving the metadata in web documents, using the metadata automatic editor because metadata is not listed in most of the web documents.

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Korean Onomatopoeia Clustering for Sound Database (음향 DB 구축을 위한 한국어 의성어 군집화)

  • Kim, Myung-Gwan;Shin, Young-Suk;Kim, Young-Rye
    • Journal of Korea Multimedia Society
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    • v.11 no.9
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    • pp.1195-1203
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    • 2008
  • Onomatopoeia of korean documents is to represent from natural or artificial sound to human language and it can express onomatopoeia language which is the nearest an object and also able to utilize as standard for clustering of Multimedia data. In this study, We get frequency of onomatopoeia in the experiment subject and select 100 onomatopoeia of use to our study In order to cluster onomatopoeia's relation, we extract feature of similarity and distance metric and then represent onomatopoeia's relation on vector space by using PCA. At the end, we can clustering onomatopoeia by using k-means algorithm.

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An Unsupervised Clustering Technique of XML Documents based on Function Transform and FFT (함수 변환과 FFT에 기반한 조정자가 없는 XML 문서 클러스터링 기법)

  • Lee, Ho-Suk
    • The KIPS Transactions:PartD
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    • v.14D no.2
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    • pp.169-180
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    • 2007
  • This paper discusses a new unsupervised XML document clustering technique based on the function transform and FFT(Fast Fourier Transform). An XML document is transformed into a discrete function based on the hierarchical nesting structure of the elements. The discrete function is, then, transformed into vectors using FFT. The vectors of two documents are compared using a weighted Euclidean distance metric. If the comparison is lower than the pre specified threshold, the two documents are considered similar in the structure and are grouped into the same cluster. XML clustering can be useful for the storage and searching of XML documents. The experiments were conducted with 800 synthetic documents and also with 520 real documents. The experiments showed that the function transform and FFT are effective for the incremental and unsupervised clustering of XML documents similar in structure.

Collision Risk Assessment by using Hierarchical Clustering Method and Real-time Data (계층 클러스터링과 실시간 데이터를 이용한 충돌위험평가)

  • Vu, Dang-Thai;Jeong, Jae-Yong
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.27 no.4
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    • pp.483-491
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    • 2021
  • The identification of regional collision risks in water areas is significant for the safety of navigation. This paper introduces a new method of collision risk assessment that incorporates a clustering method based on the distance factor - hierarchical clustering - and uses real-time data in case of several surrounding vessels, group methodology and preliminary assessment to classify vessels and evaluate the basis of collision risk evaluation (called HCAAP processing). The vessels are clustered using the hierarchical program to obtain clusters of encounter vessels and are combined with the preliminary assessment to filter relatively safe vessels. Subsequently, the distance at the closest point of approach (DCPA) and time to the closest point of approach (TCPA) between encounter vessels within each cluster are calculated to obtain the relation and comparison with the collision risk index (CRI). The mathematical relationship of CRI for each cluster of encounter vessels with DCPA and TCPA is constructed using a negative exponential function. Operators can easily evaluate the safety of all vessels navigating in the defined area using the calculated CRI. Therefore, this framework can improve the safety and security of vessel traffic transportation and reduce the loss of life and property. To illustrate the effectiveness of the framework proposed, an experimental case study was conducted within the coastal waters of Mokpo, Korea. The results demonstrated that the framework was effective and efficient in detecting and ranking collision risk indexes between encounter vessels within each cluster, which allowed an automatic risk prioritization of encounter vessels for further investigation by operators.

Teen Based Secure Group Communication Scheme for Wireless Sensor Networks (무선 센서네트워크를 위한 TEEN 기반의 안전한 그룹통신 기법)

  • Seo, Il-Soo
    • Convergence Security Journal
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    • v.9 no.2
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    • pp.71-78
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    • 2009
  • It is very difficult to apply previous security protocols to WSNs(Wireless Sensor Networks) directly because WNSs have resource constrained characteristics such as a low computing ability, power, and a low communication band width. In order to overcome the problem, we proposes a secure group communication scheme applicable to WSNs. The proposed scheme is a combined form of the TEEN(Threshold sensitive Energy Efficient sensor Network protocol) clustering based hierarchical routing protocol and security mechanism, and we assume that WSNs are composed of sensor nodes, cluster headers, and base stations. We use both private key and public key cryptographic algorithms to achieve an enhanced security and an efficient key management. In addition, communications among sensor nodes, cluster headers, and base stations are accomplished by a hierarchical tree architecture to reduce power consumption. Therefore, the proposed scheme in this paper is well suited for WSNs since our design can provide not only a more enhanced security but also a lower power consumption in communications.

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Design and Implementation of a Hypermedia System for Effective Multimedia Information Retrieval (멀티미디어 정보의 효율적인 검색을 위한 하이퍼미디어 시스템의 설계와 구현)

  • 고영곤;최윤철
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.18 no.8
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    • pp.1213-1225
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    • 1993
  • Hypermedia systems have the browsing mechanism using links and provide navigation tools to retrieve and represent multimedia information. In this study we designed and implemented a hypermedia system which has the hierarchical group and local map for effective navigation. We also propose the clustering mechanism which constructs a cluster tree and uses this knowledge for navigation. The system has been designed to integrate the browsing and searching function of the hypermedia system for efficient multimedia information retrieval and user-interface. This system can be used to develop hypermedia application systems in the area of encyclopedia, reference document information, electronic dictionary and electronic book.

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