• Title/Summary/Keyword: (L, N)-structure

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Sequencing, Genomic Structure, Chromosomal Mapping and Association Study of the Porcine ADAMTS1 Gene with Litter Size

  • Yue, K.;Peng, J.;Zheng, R.;Li, J.L.;Chen, J.F.;Li, F.E.;Dai, L.H.;Ding, SH.H.;Guo, W.H.;Xu, N.Y.;Xiong, Y.ZH.;Jiang, S.W.
    • Asian-Australasian Journal of Animal Sciences
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    • v.21 no.7
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    • pp.917-922
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    • 2008
  • A disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif (ADAMTS1) plays a critical role in follicular rupture and represents a major advance in the proteolytic events that control ovulation. In this study, a 9,026-bp DNA sequence containing the full coding region, all 8 introns and part of the 5'and 3' untranslated region of the porcine ADAMTS1 gene was obtained. Analysis of the ADAMTS1 gene using the porcine radiation hybrid panel indicated that pig ADAMTS1 is closely linkage with microsatellite marker S0215, located on SSC13q49. The open reading frame of its cDNA covered 2,844 bp and encoded 947 amino acids. The coding region of porcine ADAMTS1 as determined by sequence alignments shared 85% and 81% identity with human and mouse cDNAs, respectively. The deduced protein contained 947 amino acids showing 85% sequence similarity both to the human and mouse proteins, respectively. Comparative sequencing of three pig breeds revealed one single nucleotide polymorphism (SNP) within exon 7 of which a G-C substitution at position 6006 changes a codon for arginine into a codon for proline. The substitution was situated within a PvuII recognition site and developed as a PCR-RFLP marker for further use in population variation investigations and association analysis with litter size. Allele frequencies of this SNP were investigated in seven pig breeds/lines. An association analysis in a new Qingping female line suggested that different ADAMTS1 genotypes have significant differences in litter size (p<0.01).

An Evaluation of Fatigue Life and Strength of Lightweight Bogie Frame Made of Laminate Composites (경량 복합재 대차프레임의 피로수명 및 강도 평가)

  • Jeon, Kwang-Woo;Shin, Kwang-Bok;Kim, Jung-Seok
    • Transactions of the Korean Society of Mechanical Engineers A
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    • v.35 no.8
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    • pp.913-920
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    • 2011
  • We describe the evaluation of the fatigue life and strength of a lightweight railway bogie frame made of glass fiber/epoxy 4-harness satin-woven composites. To obtain the S-N curve for the evaluation of the fatigue characteristics of the composite bogie frame, we performed a tension-compression fatigue test for composite specimens with different stacking sequences of the warp direction, fill direction, and $0^{\circ}/90^^{\circ}$ direction. We used a stress ratio (R) of -1, a frequency of 5 Hz, and an endurance limit of $10^7$. The fatigue strength of the composite bogie frame was evaluated by a Goodman diagram according to JIS E 4207. The results show that the fatigue life and strength of the lightweight composite bogie satisfy the requirements of JIS E 4207. Given its weight, its performance was better than that of a conventional metal bogie frame based on an SM490A steel material.

Phase Formation and Electrical Conductivity of Ba-Doped LaBaGaO4 Layered Perovskite (Ba 첨가 LaBaGaO4 층상 Perovskite의 생성상과 전기전도도)

  • Lee, Kyu-Hyoung;Kim, Jong-Hwa;Kim, Hye-Lim;Kim, Shin;Lee, Hong-Lim
    • Journal of the Korean Ceramic Society
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    • v.41 no.8
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    • pp.623-627
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    • 2004
  • Phase formation and electrical conduction behavior of Ba-doped LaBaGa $O_4$ layered perovskite were studied. Orthorhombic single phase of $K_2$Ni $F_4$-type structure was observed for the composition range of 0$\leq$x$\leq$0.2 in the La$\_$1+x/Ba$\_$1+x/Ga $O_4$$\_$4-$\delta$/ system by X-ray analysis. In the dry atmosphere, La$\_$0.8/Ba$\_$1.2/Ga$\_$3.9/ exhibited mixed conduction of oxygen ion and hole (p-type) at high p( $O_2$). However, in water vapor containing atmosphere, it showed proton conduction due to the incorporation of water into oxygen vacancies. As the temperature decreased, the contribution of proton conductivity to the total conduction increased and proton conduction was dominant below 350$^{\circ}C$. The activation energy for proton conduction was calculated as 0.72 eV.

Studies on Geology and Mineral Resources of the Okchŏn Belts -Geological Structure of the Areas between Pyŏngchang, Yŏngwŏl and Jechŏn- (옥천대(沃川帶)의 지질(地質) 및 광물자원(鑛物資源)에 관(關)한 연구(硏究) -평창(平昌)~영월(寧越)~제천지역(堤川地域)의 지질구조(地質構造)-)

  • Kim, Ok Joon;Park, Pong Soon;Min, Kyung Duck
    • Economic and Environmental Geology
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    • v.18 no.4
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    • pp.369-379
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    • 1985
  • The geological structures and some of the stratigraphy in the area studied are being thought to be ambiguous and controvertible. The present study intended to clarify these ambiguities by correct interpretation of the geological structures and lithostratigraphy of the area concerned. The so-called "Sambangsan formation", which was designated as an unknown age by the Taebaksan Geological Investigation Corps (1962) and as the mid Cambrian age by T. Kobayashi (1966) and I.S. Kim (1983), has been determined by the present study as the $Hongj{\breve{o}}m$ series of Carbo-Permian age resting unconformably on the Cambro-Ordovician limestone formations. This determination was supported by conodont study concurrently carried out by I.S.Kim. The so-called "Daehari formation", which was renamed by the later study group after the original "Sambangsan formation" distributed in the area from southwest of Sambangsan toward southwest to $Juch{\breve{o}}n$, possesses more or less the same lithlogy as "Sambangsan formation" of the old designation in the eastern of the area, but different lithology in the western localities where Sadong formation, the basal sandstone member of the Kobangsan formation and the green shale member of the Nokam formation are cropped out. The narrow belt of the complex mixture of the $Py{\breve{o}}ngan$ group in-between limestone formations extending over 16km with a width of 500m to 1000m was formed by the faults: the northern boundary with the limestone formations is a fault contact all the way through entire area and the southern boundary is either fault contact in most of the area and unconformity in some other area. The $Hongj{\breve{o}}m$ formation on the Mt. Sambangsan shows rather steeply dipping nearly isoclinal folds which plunges $10^{\circ}$ to $20^{\circ}$ southward. There are also field evidences that the limestone formations distributed in both north and south of the Hongjom formation (erstwhile "Sambangsan formation") along the Sambangsan ridge are the same formations and show the same folding as the $Hongj{\breve{o}}m$ formation. Therefore, these limestone formations should be rezoned in the light of the new structural interpretation although they were differently designated in the previous studies as $Py{\breve{o}}ngchang$ and $Y{\breve{o}}ngw{\breve{o}}l$-type of the Joson Group. The structures developed in the area mostly faults, which acted as one of the guides for the new interpretation of the geology and structure of the area are described and shown on the geologic map.

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Study on Growth and Opto-Electrical Characterization of $CdS_{1-x}Se_{x}$ Thin Film using Chemical Bath Deposition Method (CBD 방법에 의한 $CdS_{1-x}Se_{x}$ 박막의 열처리에 따른 광전기적 특성)

  • Hong, K.J.;Choi, S.P.;Lee, S.Y.;You, S.H.;Shin, Y.J.;Lee, K.K.;Suh, S.S.;Kim, H.S.;Yun, E.H.;Kim, S.U.;Shin, Y.J.;Jeong, T.S.;Shin, H.K.;KIm, T.S.;Moon, J.D.;Jeon, S.L.
    • Journal of Sensor Science and Technology
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    • v.4 no.1
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    • pp.51-63
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    • 1995
  • Polycrystalline $CdS_{1-x}Se_{x}$ thin films were grown on ceramic substrate using a chemical bath deposition method. They were annealed at various temperature and X-ray diffraction patterns were measured by X-ray diffractometer in order to study $CdS_{1-x}Se_{x}$ polycrystal structure using extrapolation method of X-ray diffraction patterns for the CdS, CdSe samples annealed in $N_{2}$ gas at $550^{\circ}C$ it was found hexagonal structure which had the lattice constant $a_{0}=4.1364{\AA}$, $c_{0}=6.7129{\AA}$ in CdS and $a_{0}=4.3021{\AA}$, $c_{0}=7.0142{\AA}$ in CdSe, respectively. Hall effect on these samples was measured by Van der Pauw method and then studied on carrier density and mobility depending on temperature. We measured also spectral response, sensitivity(${\gamma}$), maximum allowable power dissipation and response time on these samples.

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The responsibility of C-terminal domain in the thermolabile haemolysin activity of Vibrio parahaemolyticus and inhibition treatments by Phellinus sp. extracts

  • Tran Thi Huyen;Ha Phuong Trang;Nguyen Thi-Ngan;Bui Dinh-Thanh;Le Pham Tan Quoc;Trinh Ngoc Nam
    • Fisheries and Aquatic Sciences
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    • v.26 no.3
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    • pp.204-215
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    • 2023
  • The thermolabile haemolysin (tlh) of Vibrio parahaemolyticus (Vptlh) from V. parahaemolyticus is a multiple-function enzyme, initially describes as a haemolytic factor activated by lecithin and phospholipase A2 enzymatic activity (Shinoda, 1991; Vazquez-Morado, 2021; Yanagase et al., 1970). Until now, the tlh structure has hypothesized including N-terminal and C-terminal domain, but what domain of the Vptlh structure does the haemolytic activity has not been refined yet. In this study, a 450-bp VpTLH nucleotide sequence of the entire Vptlh gene encoded the C-terminal domain cloned firstly to examine its responsibility in the activity of the Vptlh. The C-terminal domain fused with a 6-His-tag named the His-tag-VpC-terminal domain was expressed successfully in soluble form in the BL21 (DE3) PlysS cell. Remarkably, both expression and purification results confirmed a high agreement in the molecular weight of the His-tag-VpC-terminal domain was 47 kDa. This work showed the His-tag-VpC-terminal domain lysed the erythrocyte membranes in the blood agar and the phosphate buffered saline (0.9%) media without adding the lecithin substrate of the phospholipase enzyme. Haemolysis occurred at all tested diluted concentrations of His-tag-VpC-terminal domain (p < 0.05), providing evidence for the independent haemolytic activity of the His-tag-VpC-terminal domain. The content of 100 ㎍ of the His-tag-VpC-terminal domain brought the highest haemolytic activity of 80% compared to that in the three remaining contents. Significantly, the His-tag-VpC-terminal domain demonstrated not to involve the phospholipase activity in Luria-Bertani agar supplemented with 1% (vol/vol) egg yolk emulsion. All results proved the vital responsibility of the His-tag-VpC-terminal domain in causing the haemolytic activity without the required activation by the phospholipase enzyme. Raw extracts of Phellinus igniarus and Phellinus pipi at 10-1 mg/mL inhibited the haemolytic activity of the His-tag-VpC-terminal domain from 67.7% to 87.42%, respectively. Hence applying the His-tag-VpC-terminal domain as a simple biological material to evaluate quickly potential derivatives against the Vptlh in vivo conditions will accessible and more advantageous than using the whole of the Vptlh.

ASSOCIATION OF INFRARED DARK CLOUD CORES WITH YSOS: STARLESS OR STARRED IRDC CORES

  • Kim, Gwan-Jeong;Lee, Chang-Won;Kim, Jong-Soo;Lee, Youn-Gung;Ballesteros-Paredes, Javier;Myers, Philip C.;Kurtz, S.
    • Journal of The Korean Astronomical Society
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    • v.43 no.1
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    • pp.9-23
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    • 2010
  • In this paper we examined the association of Infrared Dark Cloud (IRDC) cores with YSOs and the geometric properties of the IRDC cores. For this study a total of 13,650 IRDC cores were collected mainly from the catalogs of the IRDC cores published from other studies and partially from our catalog of IRDC cores containing new 789 IRDC core candidates. The YSO candidates were searched for using the GLIMPSE, MSX, and IRAS point sources by the shape of their SED or using activity of water or methanol maser. The association of the IRDC cores with these YSOs was checked by their line-of-sight coincidence within the dimension of the IRDC core. This work found that a total of 4,110 IRDC cores have YSO candidates while 9,540 IRDC cores have no indication of the existence of YSOs. Considering the 12,200 IRDC cores within the GLIMPSE survey region for which the YSO candidates were determined with better sensitivity, we found that 4,098 IRDC cores (34%) have at least one YSO candidate and 1,072 cores among them seem to have embedded YSOs, while the rest 8,102 (66%) have no YSO candidate. Therefore, the ratio of [N(IRDC core with protostars)]/[N(IRDC core without YSO)] for 12,200 IRDC cores is about 0.13. Taking into account this ratio and typical lifetime of high-mass embedded YSOs, we suggest that the IRDC cores would spend about $10^4\sim10^5$ years to form high-mass stars. However, we should note that the GLIMPSE point sources have a minimum detectable luminosity of about $1.2 L_{\odot}$ at a typical IRDC core's distance of ~4 kpc. Therefore, the ratio given here should be a 100ver limit and the estimated lifetime of starless IRDC cores can be an upper limit. The physical parameters of the IRDC cores somewhat vary depending on how many YSO candidates the IRDC cores contain. The IRDC cores with more YSOs tend to be larger, more elongated, and have better darkness contrast than the IRDC cores with fewer or no YSOs.

The Improvement of Convergence Characteristic using the New RLS Algorithm in Recycling Buffer Structures

  • Kim, Gwang-Jun;Kim, Chun-Suck
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.7 no.4
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    • pp.691-698
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    • 2003
  • We extend the sue of the method of least square to develop a recursive algorithm for the design of adaptive transversal filters such that, given the least-square estimate of this vector of the filter at iteration n-l, we may compute the updated estimate of this vector at iteration n upon the arrival of new data. We begin the development of the RLS algorithm by reviewing some basic relations that pertain to the method of least squares. Then, by exploiting a relation in matrix algebra known as the matrix inversion lemma, we develop the RLS algorithm. An important feature of the RLS algorithm is that it utilizes information contained in the input data, extending back to the instant of time when the algorithm is initiated. In this paper, we propose new tap weight updated RLS algorithm in adaptive transversal filter with data-recycling buffer structure. We prove that convergence speed of learning curve of RLS algorithm with data-recycling buffer is faster than it of exiting RLS algorithm to mean square error versus iteration number. Also the resulting rate of convergence is typically an order of magnitude faster than the simple LMS algorithm. We show that the number of desired sample is portion to increase to converge the specified value from the three dimension simulation result of mean square error according to the degree of channel amplitude distortion and data-recycle buffer number. This improvement of convergence character in performance, is achieved at the B times of convergence speed of mean square error increase in data recycle buffer number with new proposed RLS algorithm.

Effect of Housing on Physiological Responses and Energy Expenditure of Sheep in a Semi-arid Region of India

  • Bhatta, Raghavendra;Swain, N.;Verma, D.L.;Singh, N.P.
    • Asian-Australasian Journal of Animal Sciences
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    • v.18 no.8
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    • pp.1188-1193
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    • 2005
  • An investigation was carried out to study the effect of two housing systems on physiological responses and energy expenditure of sheep in a semi-arid region of India. Two types of housing management were adopted. First was a shed- $6{\times}3\;m^2$ structure with all the four sides of 1.8 m chain link fencing with a central height of 3 m. The roof was covered with asbestos sheets and with mud floorings. Second was an open corral- $6{\times}3\;m^2$ open space with all the four sides covered with 1.8 m chain link fencing. Thirty-four (32 ewes and 2 rams) sheep of native Malpura breed aged about 18 months (body weight 28 kg ewes; 35 kg rams) were grazed together on a 35 ha plot of native range. All the sheep were grazed as a flock from 08.00 to 17.00 h during a yearlong study. The flock was divided into two groups (16 ewes+1 ram) in the evening and housed as per the systems (Shed and Open Corral). Dry and wet temperatures were recorded at 06.00 h and 21.00 h using a wet and dry bulb-thermometer both inside the shed and in the open corral and temperature humidity index (THI) was calculated. There was significant (p<0.05) difference in the THI between shed and open corral in all the seasons, indicating that shed was always warmer compared to open corral. Rectal temperature (RT) of both the groups of sheep was similar during morning as well as evening throughout the seasons. There were significant (p<0.05) differences in the skin temperature (ST) and respiration rate (RR) between the two groups at both the measurements in all the seasons. Highest energy expenditure (EE) was recorded inside the shed at 21.00 h (224 kJ/h) during monsoon and lowest at 6.00 h during winter (119 kJ/h). There was a significant (p<0.05) difference between the EE inside the shed and that in the open corral. It was concluded that housing had significant effects on the physiological responses and EE of sheep. Provision of housing at night was stressful during monsoon (with less rainfall) and summer, whereas it was protecting the sheep from acute cold during winter in a semi-arid region of India.

Seasonal Variation of Larval Fish Community in Jinhae Bay, Korea (진해만 자어 군집의 계절 변동)

  • Moon, Seong Yong;Lee, Jeong-Hoon;Choi, Jung-Hwa;Ji, Hwan Sung;Yoo, Joon-Taek;Kim, Jung-Nyun;Im, Yang Jae
    • Korean Journal of Environmental Biology
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    • v.36 no.2
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    • pp.140-149
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    • 2018
  • Seasonal variations in the community structure of larval fish assemblage in Jinhae Bay were investigated in February, May, August and November of 2015, and in the same months in 2016. During the study period, a total of 28 larvae species belonging to 24 families were collected. The dominant species were Clupea pallasii, Liparis tanakae, Callionymidae sp., Sillago japonica, Ernogrammus hexagrammus and Engraulis japonica. These six species accounted for 77.6% of the total number of larvae during the survey period. The larvae of C. pallasii and L. tanakae were exclusively caught in February 2015 and 2016, while those of Apogon lineatus and Sillago japonica were exclusively caught in August 2015 and 2016. Overall, species diversity of the fish larvae was highest in February and August, although it was relatively low in May. The results of the non-metric multidimensional scaling (nMDS) analysis using the number of individual larval fish showed that they are divided into four seasonal groups. Our results showed that the community of larval fish in Jinhae Bay was affected by seasonal changes in temperature and the emergence of spawning fish species. Additionally, we suggest that the high abundance of larval fish came from around Jam-do and the northern part of Chilcheon-do; these locations are the main spawning grounds of Jinhae Bay.