Properties and Industrial Applications of Seaweed Polysaccharides-degrading Enzymes from the Marine Microorganisms |
Kim, Jeong-Hwan
(Department of Biomaterial Control (BK21 program), Dong-Eui University)
Kim, Yeon-Hee (Department of Biomaterial Control (BK21 program), Dong-Eui University) Kim, Sung-Koo (Department of Biotechnology, Pukyong National University) Kim, Byung-Woo (Department of Biomaterial Control (BK21 program), Dong-Eui University) Nam, Soo-Wan (Department of Biomaterial Control (BK21 program), Dong-Eui University) |
1 | Haug, A., B. Larsen, and O. Smidsrod. 1966. A study of constitution of alginic acid by partial acid hydrolysis. Acta. Chemica. Scand. 20: 183-190. |
2 | Henderson, M. J. and F. H. Milazzo. 1979. Arylsulfatase in salmonella typhymurium: Detection and influence of carbon source and tyramine on its synthesis. J. Bacteriol. 139: 80- 87. |
3 | Hicks, S. J. and P. Gacesa. 1996. Heterologous expression of full-length and truncated forms of the recombinant guluronate-specific alginate lyase of Klebsiella pneumoniae. Enzyme Microbiol. Technol. 19: 68-73. DOI ScienceOn |
4 | Hoshi, M. and T. Moriya. 1980. Arylsulfatase of sea-urchin sperm. 2. Arylsulfatase as a lysin of sea-urchins. Dev. Biol. 74: 343-350. DOI ScienceOn |
5 | Iwamoto, Y., R. Araki, K. Iriyam, T. Oda, H. Fukuda, S. Hayashida, and T. Muramatsu. 2001. Purification and characterization of bifunctional alginate lyase from Alteromonas sp. strain no. 272 and its action on saturated oligomeric substrates. Biosci. Biotechnol. Biochem. 65: 133-142. DOI ScienceOn |
6 | Chevolot, L. A. Foucault, F. Chaubet, N. Kervarec, C. Sinquin, A. M. Fisher, and C. Boisson-Vidal. 1999. Futher data on the structure of brown seaweed fucans: relationships with anticoagulant activity. Carbohydr. Res. 319: 154-165. DOI ScienceOn |
7 | Chisti, Y. 2007. Biodiesel from microalgae. Biotechnol. Adv. 25: 294-306. DOI ScienceOn |
8 | Cho, E. S., J. H. Kim, Y. H. Kim, and S. W. Nam. 2010. Characterization of Agarose Produced by Yeast Cell Surface Displayed-Arylsulfatase. Kor. J. Microbiol. Biotechnol. 38: 428-433. |
9 | Cho, K. J., Y. S. Lee, and B. H. Ryu. 1990. Antitumor effect and immunology activity of seaweeds toward sarcoma-180. Bull. Kor. Fish. Soc. 23: 345-352. |
10 | Davidson, I. W., I. W. Sutherland, and C. J. Lawson. 1976. Purification and properties of an alginate lyase from a marine bacterium. Biochem. J. 159: 707-713. |
11 | De Hostos, E. L., R. K. Togasaki, and A. Grossman. 1988. Purification and biosynthesis of a derepressible periplasmic arylsulfatase from Chlamydomonas reinharditii. J. Cell Biol. 106: 29-37. DOI ScienceOn |
12 | Do, J. H. 1997. Extraction and purification of agar from Gelidium amansii. J. Korean Fish Soc. 30: 423-427. |
13 | Araki, T., M. Hayakawa, Z. Lu, S. Karita, and T. Morishita. 1998. Purification and characterization of agarases from a marine bacterium, Vibrio sp. PO-303. J. Mar. Biotechnol. 6: 260-265. |
14 | Asia, Y., Y. Miyakawa, T. Nakazato, H. Shibata, K. Saito, Y. Ikeda, and M. Kizaki. 2005. Fucoidan induces apoptosis of human HS-sultan cells accompanied by activation of caspase-3 and down-regulation of ERK pathway. Am. J. Hematol. 78: 7-14. DOI ScienceOn |
15 | Buck, B. C. and C. M. Buchholz. 2004. The offshore ring: A new system design for the open ocean aquaculture of macroalgae. J. Appl. Phycol. 16: 355-369. |
16 | Beer, L., E. S. Boyd, J. Peters, and M. Posewitz. 2009. Engineering algae for biohydrogen and biofuel production. Current Opinion in Biotechnology 20: 264-271. DOI ScienceOn |
17 | Beil, S., H. Kehrli, J. Peter, W. Staudenmann, A. M. Cook, T. Leisinger, and M. A. Kertesz. 1995. Purification and characterization of the agaropectin sulfatase synthesized by Psedomonas aeruginosa PAO during growth in sulfate-free medium and cloning of the arylsulfatase gene(atsA). Eur. J. Biochem. 229: 385-394. DOI ScienceOn |
18 | Berteau, O. and B. Mulloy. 2003. Sulfated fucans, fresh perspectives: structures, functions, and biological properties of sulfated fucans and an overview of enzymes active toward this class of polysaccharide. Glycobiol. 13: 29-40. |
19 | Uo, M. H., D. S. Joo, S. Y. Cho, and T. S. Min. 2006. Purification and characterization of the extracellular alginase produced by Bacillus lichenformis AL-577. J. Kor. Soc. Food Sci. Nutr. 35: 231-237. DOI |
20 | Temuujin,, U., W. J. Chi, S. Y. Lee, Y. K. Chang, and S. K. Hong. 2011. Overexpression and biochemical characterization of DagA from Streptomyces coelicolor A3(2): an endo-type producing neoagarotetraose and neoagarohexaose. Appl. Microbiol. Biotechnol. DOI:10.1007/ S00253-011-3347-7 |
21 | Wang, X., X. Liu, and G. Wang. 2011. Two-stage hydrolysis of invasive algal feedstock for ethanol fermentation. J. Integr. Plant Biol. 53: 246-252. DOI ScienceOn |
22 | Zhang, W. W. and L. Sun. 2007. Cloning, characterization, and molecular application of a beta-agarase gene from Vibrio sp. strain V134. Appl. Environ. Microbiol. 73: 2825- 2831. DOI ScienceOn |
23 | Yang, J. S. and S. R. Lee. 1997. Effect of ionizing radiation on the extraction yield and viscosity of alginate. Korean J. Food Sci. Technol. 9: 194-198. |
24 | Yeon, J. H., S. E. Lee, W. Y. Choi, D. H. Kang, H. Y. Lee, and K. H. Jung. 2011. Repeated-batch operation of surfaceaerated fermentor for bioethanol production from the hydrolysate of seaweed Sargassum sagamianum. J. Microbiol. Biotechnol. 21: 323-331. |
25 | Yun, E. J., M. H. Shin, J. J. Yoon, Y. J. Kim, I. G. Choi, and K. H. Kim. 2011. Production of 3,6-anhydro-l-galactose from agarose by agarolytic enzymes of Saccharophagus degradans 2-40. Process Biochemistry 46: 88-93. DOI ScienceOn |
26 | Park, Y. H., D. S. Chang, and S. B. Kim. 1994. Symbiotic formation of alginate lyase in mixed culture of bacteria isolated from soil. J. Ferment. Bioeng. 69: 192-194. |
27 | Nakashima, H., Y. Kido, N. Kobayashi, Y. Motoki, M. Neushal, and N. Yamamoto. 1987. Purification and characterization of an avian myeloblastosis and human immunodeficiency virus reverse transcriptase inhibitor sulfated polysaccharide extracted from sea algae. Agents Chemother. 31: 1524-1528. DOI ScienceOn |
28 | Oh, C. H., C. Nikapitiya, Y. D. Lee, I. S. Whang, S. J. Kim, D. H. Kang, J. H. Lee. 2010. Cloning, purification and biochemical characterization of beta agarase from the marine bacterium Pseudoalteromonas sp. AG4. J. Ind. Microbiol. Biotechnol. 37: 483-494. DOI ScienceOn |
29 | Ohta, Y., Y. Hatada, M. Miyazaki, Y. Nogi, S. Ito, and K. Horikoshi. 2005. Purification and characterization of a novel -agarase from a Thalassomonas sp. Curr. Microbiol. 50: 212-216. DOI ScienceOn |
30 | Park, K. Y., J. H. Back, W. Hur, and S. Y. Lee. 2007. In vitro glucose and bile acid retardation effect of fucoidan from Laminaria japonica. Kor. J. Biotechnol. Bioeng. 4: 265-269. |
31 | Pereira, M. S., B. Mulloy, and P. A. S. Mourao. 1999. Structure and anticoagulant activity of sulfated fucans. J. Biol. Chem. 274: 7656-7667. DOI |
32 | Preeprame, S., K. Hayashi, J. B. Lee, U. Sankawa, and T. Hayashi. 2001. A novel antivirally active fucan sulfate derived from an edible brown alga. Chem. Pharm. Bull. 49: 484-485. DOI ScienceOn |
33 | Rehm, B. H. A. and S. Valla. 1997. Bacterial alginates: biosynthesis and applications. Appl. Microbiol. Biotechnol. 48: 281-288. DOI ScienceOn |
34 | Seok, J. H., H. G. Park, S. H. Lee, S. W. Nam, S. J. Jeon, J. H. Kim, and Y. H. Kim. 2010. High-level secretory expression of recombinant -agarase from Zobellia galactanivorans in Pichia pastoris. Kor. J. Microbiol. Biotechnol. 38: 40-45. |
35 | Scot, M., G. M. Colin, J. David, L. Mills, and J. B. Brian. 1987. Estimation of meiobenthic nematode diversity by non specialists. Marine Pollu. Bulletin. 18: 646-649. DOI ScienceOn |
36 | Miech, C., T. Dierks, T. Selmer, K. V. Figura, and B. Schmidt. 1998. Arylsulfatase from Klebsiella pneumoniaecarries a formylglycine generated from a serine. J. Biol. Chem. 273: 4835-4837. DOI |
37 | Lee, Y. S., D. S. Kim, B. H. Ryu, and S. H. Lee. 1992. Antitumor and immunomodulating effects of seaweeds toward sarcoma-180 cell. J. Kor. Soc. Food Nutr. 21: 544- 550. |
38 | Linker, A. and L. R. Evans. 1984. Isolation and characterization of an alginase from mucoid strains of Pseudomonas aeroguinosa. J. Bacteriol. 159: 958-964. |
39 | Luning, K. and S. J. Pang. 2003. Mass cultivation of seaweeds: current aspects and approaches. J. Appl. Phycol. 15:115-119. |
40 | Kim, H. C., H. J. Kim, W. B. Choi, and S. W. Nam. 2006. Inulooligosaccharides production from inulin by Saccharomyces cerevisiae strain displaying cell-surface endoinulinase. J. Microbiol. Biotechnol. 16: 360-367. |
41 | Kim, M. J., J. H. Kim, and S. W. Nam. 2011. Constitutive overexpression of Pseudoalteromonas carrageenovora arylsulfatase in E. coli fed-batch culture. Kor. J. Chem. Eng. 28: 1101-1104. DOI ScienceOn |
42 | Kim, O. J., D. G. Lee, S. M. Lee, S. J. Lee, H. J. Do, H. J. Park, A. Kim, J. H. Lee, and J. M. Ha. 2010. Isolation and characteristics of alginate-degrading Methylobacterium sp. HJM27. Kor. J. Microbiol. Biotechnol. 38: 144-150. |
43 | Kong, J. Y., S. H. Hwang, B. J. Kim, S. K. Bae, and J. D. Kim. 1997. Cloning and expression of an agarase gene form a marine bacterium Pseudomonas sp. w7. Biotechnol. Lett. 19: 23-26. DOI ScienceOn |
44 | Lee, B. H., S. B. Lee, and W. K. Kim. 2009. Alginate fiber. Fiber Technol. Ind. 13: 21-24. |
45 | Lee, J. H. and E. Y. Lee. 2003. Isolation of alginate degrading marine bacteria and characterization of alginase. J. Life Sci. 23: 718-722. |
46 | Lee, J. H., M. J. Bae, Y. C. Kim, and S. W. Nam. 2009. Identification and characterization of alginate lyase producing Pseudomonas sp. N7151-6. Kor. J. Microbiol. Biotechnol. 37: 350-354. |
47 | Lee, S., Y. Oh, D. Kim, D. Kwon, C. Lee, and J. Lee. 2011. Converting carbohydrates extracted from marine algae into ethanol using various ethanolic Escherichia coli strains. Appl. Biochem. Biotechnol. 164:878-888. DOI ScienceOn |
48 | Kim, B. J., S. D. Ha., D. J. Lim., C. Song, and J. Y. Kong. 1998. Production of agarase from marine bacterium Bacillus cereus ASK202. Kor. J. Biotechnol. Bioeng. 13: 524-529.. |
49 | Jung, J. Y., S. S. Hur, and Y. H. Choi. 1999. Studies on the efficient extraction process of alginic acid in sea tangle. Food Eng. Prog. 3: 90-97. |
50 | Kato, I. 2000. Antioxidative and antitumorigenic properties of agarooligosaccharide. Bio Industry 17: 13-19. |
51 | Kim, D. E., E. Y. Lee, and H. S. Kim. 2009. Cloning and characterization of alginate lyase from a marine bacterium Streptomyces sp. ALG-5. Mar. Biotechnol. 11:10-16. DOI ScienceOn |
52 | Dobashi, K., T. Nishino, M. Fufihara, and T. Nagumo. 1989. Isolation and preliminary characterization of fucose containing sulfated polysaccharide with blood anticoagulant activity from the brown seaweed. Carbohydr. Res. 194: 315- 320. |
53 | Jansen, H. J., C. A. Hart, J. M. Rhodes, J. R. Saunders, and J. W. Smalley. 1999. A novel mucin-sulphatase activity found in Bukholderia cepacia and Pseudomonas aeruginosa. J. Med. Microbiol. 48: 551-557. DOI ScienceOn |
54 | John, R. P., G. S. Anisha, K. M. Nampoothiri, and A. Pandey. 2011. Micro and macroalgal biomass: a renewable source for bioethanol. Bioresour. Technol. 102:186-193. DOI ScienceOn |
55 | John, R. P., G. S. Anisha, K. M. Nampoothiri, and A. Pandey. 2011. Micro and macroalgal biomass: a renewable source for bioethanol. Bioresour. Technol. 102:186-193. DOI ScienceOn |
56 | Joo, D. S., J. S. Lee., J. J. Park., S. Y. Cho., H. K. Kim, and E. H. Lee. 1996. Preparation of oligosaccharides from alginic acid enzymatic hydrolysis. Kor. J. Food Sci. Technol. 28: 146-151. |
57 | Joo, D. S., S. Y. Cho, and E. H. Lee. 1993. Isolation of alginate-degrading bacteria and production of alginate degrading activities by bacteria. Kor. J. Appl. Microbiol. Biotechnol. 21: 207-213. |
58 | Dolan, T. C. S. and D. A. Rees. 1965. The carrageenans. II. The positions of the glycosidic linkages and sulphate esters in . J. Chem. Soc. 3534. |
59 | Duckworth, M. and W. Yaphe. 1971. Structure of ahar. I. Fractionation of a complex mixture of polysaccharides. Carbo. Res. 16: 189-197. DOI ScienceOn |
60 | Fisher, F. G. and H. Dorfel. 1955. The polyuronic acids of brown algae. Part I. Z. Physiol. Chem. 302: 186-203. DOI |
61 | Fu, X. T., C. H. Pan, H. Lin, and S. M. Kim. 2009. Gene cloning, expression, and characterization of a beta-agarase, agaB34, from Agarivorans albus YKW-34. J. Microbiol. Biotechnol. 19: 257-264. |
62 | Gacesa, P. 1988. Alginates. Carbohydr. Polym. 8: 161-182. DOI ScienceOn |
63 | Guven, K. C., Y. Ozsoy, and O. N. Ulutin. 1991. Anticoagulant, fibrinolytic and antiaggregant activity of carrageenans and alginic acid. Botan. Marin. 34: 429-435. |