• Journal of Microbiology and Biotechnology
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• 제15권4호
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• pp.694-700
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• 2005

Defects in the mitotic spindle or in the attachment of chromosomes to the spindle are believed to release an activated form of spindle checkpoint complex that inhibits APC-dependent ubiquitination and subsequently arrests the cell cycle at metaphase. When the spindle assembly is disrupted, the fission yeast mitotic arrest deficient (mad) mutants fail to arrest and rapidly lose viability. To enhance our understanding of the molecular mechanisms for the pathway of checkpoint function, the functional characterizations of Mad 1 p from Schizosaccharomyces pombe involved in this process have been carried out. Yeast two-hybrid and various deletion analyses of S. pombe Mad1 p reveal that the C terminus of Mad1p is critical for the binding of Mad2p and maintenance of Mad 1 p-Mad2p interaction. In addition, it was found. that the Mad1p region (residues 206-356) is essential for Mad1p-other checkpoint components. Mad1p truncating this region is sufficient to bind Mad2p but abolishes the checkpoint function, indicating that the checkpoint function is necessary for interaction of Mad 1 p-other checkpoint components. The possible functions of S. pombe Mad1p at the cell cycle checkpoint are discussed.

• Molecules and Cells
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• 제26권3호
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• pp.291-298
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• 2008

Human karyopherin ${\beta}3$, highly homologous to a yeast protein secretion enhancer (PSE1), has often been reported to be associated with a mediator of a nucleocytoplasmic transport pathway. Previously, we showed that karyopherin ${\beta}3$ complemented the PSE1 and KAP123 double mutant. Our research suggested that karyopherin beta has an evolutionary function similar to that of yeast PSE1 and/or KAP 123. In this study, we performed yeast two-hybrid screening to find a protein which would interact with karyopherin ${\beta}3$ and identified apolipoprotein A-I (apo A-I), a secretion protein with a primary function in cholesterol transport. By using in vitro binding assay, co-immunoprecipitation, and colocalization studies, we defined an interaction between karyopherin ${\beta}3$ and apo A-I. In addition, overexpression of karyopherin ${\beta}3$ significantly increased apo A-I secretion. These results suggest that karyopherin ${\beta}3$ plays a crucial role in apo A-I secretion. These findings may be relevant to the study of a novel function of karyopherin ${\beta}3$ and coronary artery diseases associated with apo A-I.

• 생명과학회지
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• 제17권7호통권87호
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• pp.889-895
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• 2007

KIF5는 2분자의 kinesin heavy chain (KHC)과 2분자의 kinesin light cham (KLC)으로 구성되며 미세소관과 직접 결합한다. KIF5는 여러가지 세포 내 소기관을 이동시키나 KIF5가 이동시키는 운반체가 어떻게 특이적으로 결합하는지는 아직 밝혀지지 못하였다. 본 연구에서 효모 two-hybrid system을 사용하여 KLC1의 tetratricopeptide repeats (TRP) 부위와 결합하는 세포 내의 단백질을 분리하였다. 결과 KLC1와 특이적으로 결합하는JNK/stress-activated protein kinase-associated protein 1 (JSAP1/JIP3)을 분리하였다. 이러한 결합은 KLC1의 TRP1, 2 영역과 JSAP1의 leucine zipper 영역이 결합에 관여하며, 또한 효모 two-hybrid assay에서 JSAP1은 KLC2와 결합하지만 신경세포에서 발현하는 KIF5A, KIF5C 그리고 모든 세포에서 발현하는 KIF5B와는 결합하지 않았다. 단백질간의 결합을 pull-down assay로 확인한 결과 KLC1은 glutathione S-transferase (GST)와는 결합하지 않으나 GST결한 JSAP1과는 결합하였다. 또한 생쥐의 뇌 파쇄 액으로부터 JSAP1 항체로 면역침강을 행한 결과 KLC1은 JSAP1과 같이 침강하였다. 이러한 결과들은 KLC1은 JSAP1과 결합하며, JSAP1은 KLC1의 수용체로세포 내 KIF5의 수송의 매개 단백질로 작용함을 시사한다.

• Journal of Ginseng Research
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• 제41권3호
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• pp.403-410
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• 2017

Background: Prenyltransferases catalyze the sequential addition of isopentenyl diphosphate units to allylic prenyl diphosphate acceptors and are classified as either trans-prenyltransferases (TPTs) or cis-prenyltransferases (CPTs). The functions of CPTs have been well characterized in bacteria, yeast, and mammals compared to plants. The characterization of CPTs also has been less studied than TPTs. In the present study, molecular cloning and functional characterization of a CPT from a medicinal plant, Panax ginseng Mayer were addressed. Methods: Gene expression patterns of PgCPT1 were analyzed by quantitative reverse transcription polymerase chain reaction. In planta transformation was generated by floral dipping using Agrobacterium tumefaciens. Yeast transformation was performed by lithium acetate and heat-shock for $rer2{\Delta}$ complementation and yeast-two-hybrid assay. Results: The ginseng genome contains at least one family of three putative CPT genes. PgCPT1 is expressed in all organs, but more predominantly in the leaves. Overexpression of PgCPT1 did not show any plant growth defect, and its protein can complement yeast mutant $rer2{\Delta}$ via possible protein-protein interaction with PgCPTL2. Conclusion: Partial complementation of the yeast dolichol biosynthesis mutant $rer2{\Delta}$ suggested that PgCPT1 is involved in dolichol biosynthesis. Direct protein interaction between PgCPT1 and a human Nogo-B receptor homolog suggests that PgCPT1 requires an accessory component for proper function.

• Applied Biological Chemistry
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• 제49권3호
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• pp.186-191
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• 2006

본 연구는 전기적 세포융합방법인 electrofusion을 이용하여 우량균주의 육성을 목적으로 S. cerevisiae KCTC7904와 Z. rouxii KCTC7966 간의 전기융합을 실시하였고, 융합주의 내당성과 내염성을 확인하였으며, 융합주의 선별방법을 연구하였다. 또한 융합주의 유전안정성과 RAPD-PCR 분석을 통한 융합여부의 직접적인 증거를 확인하고자 실험하였다. S. cerevisiae KCTC7904와 Z. rouxii KCTC 7966를 각각 $12{\sim}36$시간 배양하여 분리 세척한 다음 1.5% 2-mercaptoethanol로 20분간 전 처리하여 lyticase(200 U/ml)로 $30^{\circ}C$에서 최종적으로 $60{\sim}90$분간 처리했을 때, 91% 이상의 원형질체를 얻을 수 있었다. 얻어진 원형질체를 $1.0{\sim}1.2\;M$ sorbitol 용액으로 세척 한 다음 각각 1 : 1의 비율로 혼합하여 1.5 MHz/50 pV의 고주파를 가하였을때 paired protoplast가 형성되었으며, 615 $V/256\;{\mu}sec$의 고전압을 가한 결과 약 25% 정도의 융합체를 얻을 수 있었다. 선별된 융합주의 내당성과 내염성을 각각의 모균주와 비교하여 실험한 결과 50%의 glucose와 15%의 NaCl을 함유한 배지에서 모두 생육이 가능하여 각각의 균주 특성을 가지고 있음을 확인하였고, 또한 융합주를 $4^{\circ}C$에서 5개월간 보관했을 때 약 28%정도가 모균주로 복귀되었지만, 72%의 융합안정성을 나타내므로 비교적 안정한 상태를 확인할 수 있었다. 융합의 진위 여부를 증명하기 위해 유전적인 분석방법인 RAPD-PCR 법을 사용하여 실험한 결과 각각의 균주가 agarose gel 상에서 보인 band의 패턴이 융합주에서도 모두 보여짐을 확인하였다.

• 자연과학논문집
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• 제17권1호
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• pp.13-29
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• 2006

산화-환원 활성 단백질중에 하나인 설피레독신과의 결합 단백질을 효모 Two-hybrid 기법을 이용하여 탐색한 결과, 알파-만노시다제가 설피레독신과 특이적으로 결합함을 밝혔다. 알파-만노시다제는 D-만노스 당을 비환원성 말단으로부터 유리시키는 가수분해 효소로서, 세포 원형질에 다량체 형태로 존재한다. 본 연구에서는 설피레독신과 알파-만노시다제간의 단백질결합을 설피레독신의 새로운 생리기능 관점에서 토의했다.

• BMB Reports
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• 제33권2호
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• pp.97-102
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• 2000

Phosphoinositide-specific phospholipase C-${\gamma}1$ (PLC-${\gamma}1$) is a pivotal mediator in the signal transduction cascades induced by many growth factors. Using a yeast two-hybrid system, heat-shock protein 90 (Hsp90) was identified as a PLC-${\gamma}1$-binding protein. A co-immunoprecipitation experiment, using anti-PLC-${\gamma}1$ antibody, demonstrated an in vivo interaction between Hsp90 and PLC-${\gamma}1$ in the NIH-3T3 cells. The interaction in NIH-3T3 was unaffected by the PDGF treatment, inducing phosphorylation and activation of PLC-${\gamma}1$. Direct interaction between Hsp90 and PLC-${\gamma}1$ was confirmed by in vitro binding experiments using purified Hsp90 and PLC-${\gamma}1$. Furthermore, Hsp90 increased the $PIP_2$-hydrolyzing activity of PLC-${\gamma}1$ up to 2-fold at $0.1{\mu}M$ in vitro. Taken together, we show for the first time, the interaction of PLC-${\gamma}1$ with Hsp90, both in vivo and in vitro. We suggest that Hsp90 may play a role in PLC-${\gamma}1$-mediated signal transduction.

• The Korean Journal of Physiology and Pharmacology
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• 제8권3호
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• pp.167-172
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• 2004

The kinesin proteins (KIFs) make up a large superfamily of molecular motors that transport cargo such as vesicles, protein complexes, and organelles. KIF5 is a heterotetrameric motor that conveys vesicles and plays an important role in neuronal function. Here, we used the yeast two-hybrid system to identify the neuronal protein(s) that interacts with the tail region of KIF5 and found a specific interaction with ${\beta}III$ spectrin. The amino acid residues between 1394 and 1774 of ${\beta}III$ spectrin were required for the interaction with KIF5C. ${\beta}III$ spectrin also bound to the tail region of neuronal KIF5A and ubiquitous KIF5B but not to other kinesin family members in the yeast two-hybrid assay. In addition, these proteins showed specific interactions, confirmed by GST pull-down assay and co-immunoprecipitation. ${\beta}III$ spectrin interacted with GST-KIF5 fusion proteins, but not with GST alone. An antibody to ${\beta}III$ spectrin specifically co-immunoprecipitated KIF5s associated with ${\beta}III$ spectrin from mouse brain extracts. These results suggest that KTF5 motor proteins transport vesicles or organelles that are coated with ${\beta}III$ spectrin.

• 한국콘텐츠학회논문지
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• 제8권1호
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• pp.259-271
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• 2008

본 논문에서는 단백질-단백질 상호작용과 도메인 분석을 통해 기능이 알려지지 않은 미지 단백질의 기능을 예측할 수 있는 알고리즘을 제안한다. 먼저 MIPS 데이터베이스로부터 효모에 대한 단백질-단백질 상호작용(PPI) 네트러크를 구축한다. 구축된 PPI 네트워크는(단백질 3,637개, 상호작용 10,391개) 많은 상호작용을 갖는 소수의 단백질들을 갖으면서 단백질 클러스터의 고유한 모듈성을 보이는 스케일 프리 네트워크와 계층적 네트워크의 특성을 보인다 단백질-단백질 상호작용 데이터베이스는 Y2보(Yeast Two Hybrid) 실험 등으로 얻어졌기 때문에 부정확한 데이터를 포함하고 있다. 따라서 본 논문에서는 세포상의 localization을 고려하여 부정확한 데이터를 정제하여 PPI 네트워크를 재구축한다. 그리고 허브 단백질과 네트워크 구조를 분석하여 네트워크로부터 구조적 모듈을 발견하고 이를 정의한다. 또한 이러한 구조적 모듈로부터 단백질의 도메인을 분석하여 기능적 모듈을 밝히고, 높은 확실성을 가지는 기능적 모듈을 기반으로 미지 단백질에 대한 기능을 예측한다.

• 대한의생명과학회지
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• 제13권1호
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• pp.1-10
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• 2007

Nebulin, a giant modular protein from muscle, is thought to act as molecular ruler in sarcomere assembly. In skeletal muscle, the C-terminal ${\sim}50 kDa$ region of nebulin extends into the Z-line lattice. The most recent studies implicated highlighting its extensive isoform diversity and exciting reports revealed its expression in cardiac and non-muscle tissues containing brain. Also these novel findings are indicating that nebulin is actually a multifunctional filament system, perhaps playing roles in signal transduction, contractile regulation, and myofibril force generation, as well as other not yet defined functions. However the binding protein of nebulin and function in brain is still unknown. A novel binding partner of nebulin C-terminal region was identified by screening a human brain cDNA library using yeast two-hybrid system. Nebulin C-terminus binding protein 51 (NCBP51) was contained a RING-finger domain and identified a new isoform of RING finger protein 125 (RNF125). The interaction was confirmed using the GST pull-down assay. NCBP51 belongs to a family of the RING finger proteins and its function remains to be identified in brain. The role of nebulin and NCBP51 will be studied by loss-of-function using siRNA technique in brain.