• Title/Summary/Keyword: water chemistry factors

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A Theoretical Study of a Z-DNA Crystal: Structure of Counterions, Water and DNA Molecules

  • Ho Soon Kim;Byung Jin Mhin;Chang Woo Yoon;C. X. Wang;Kwang S. Kim
    • Bulletin of the Korean Chemical Society
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    • v.12 no.2
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    • pp.214-219
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    • 1991
  • To study the effect of solvents and counterions in Z-DNA crystal of d(5BrC-G-5BrC-G-5BrC-G), we performed the local energy analysis and then molecular dynamics simulations. Since counterions raise serious caging problems in crystal simulations, it is very important to search for the possible positions before simulations. For this purpose, the local energy analysis was done for the whole crystal volume. It is shown from our simulation that counterions along with water molecules play a bridging role to bind adjacent oligomers so as to form the crystal. In this crystal, each water molecule bound to Gua-N2H, either directly or indirectly, hydrates the adjacent anionic phosphate oxygen, and thus assists Gua to be in a syn position. From the simulation, the average root-mean-square deviation of allthe DNA heavy atom coordinates from the X-ray data is $0.99{\AA}$ . The bases are less deviated from the X-ray positions than the phosphates. The temperature factors from the simulation are consistent with those from the X-ray refinement, showing that the phosphates are more mobile than the bases.

Determination of Dissociation Constant of Hydrogen Cupferrate in Methanol-Water and 2-Propanol-Water Solution (Methanol-물 및 2-Propanol-물의 混合溶媒에서의 Hydrogen Cupferrate의 酸解離常數의 決定)

  • Si-Joong Kim;Chang-Ju Yoon;In-Soon Chang
    • Journal of the Korean Chemical Society
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    • v.10 no.3
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    • pp.119-128
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    • 1966
  • The glass electrode was empirically calibrated in methanol-and 2-propanol-water mixed solvents, by means of which the pH-meter reading could be converted to stoichiometric hydrogen ion concentration. The thermodynamic dissociation constants of hydrogen cupferrate in methanol-and 2-propanol-water solution were potentiometrically determined with the changes in composition of organic solvents at 0.01 and 0.05 of the ionic strength and 25$^{\circ}C$. The empirical formula of the constants with mole fraction (n) of the organic solvent are as follow: methanol-water solution $pK_a$= 2.24n + 4.29 at ${\mu}$ = 0.01 n = 0.0476∼0.642 $pK_a$ = 2.35n + 4.38 at ${\mu}$ = 0.05 n= 0.0446~0.642 2-propanol-water solution $pK_a$= 5.50n + 4.48 at ${\mu}$ = 0.05 n = 0.0253~0.259 The relationships between $pK_a$ of acetic acid, propionic acid and HCup and dielectric constant of some mixed solvents were discussed. It would be considered that the factors effecting $pK_a$ value of weak acid in mixed-solvent are not only dielectric constants but acid-base character and solvation effect of the solvent, etc.

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Production and Degradation of Cyanobacterial Toxin in Water Reservoir, Lake Soyang

  • Pyo, Dong-Jin;Jin, Jung-Eun
    • Bulletin of the Korean Chemical Society
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    • v.28 no.5
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    • pp.800-804
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    • 2007
  • Cyanobacterial toxins, microcystins are very potent hepatotoxins and their occurrence has been reported all over the world. They could threaten human health when toxic Microcystis occurs in water supply reservoirs. In this study, the effects of several environmental factors on production and degradation of toxins produced by cyanobacteria in Lake Soyang have been studied. A new rapid quantification method of microcystins using fluorescence for a detection signal and a lateral-flow-type immunochromatography as a separation system was used. Culture age, temperature, light intensity, pH, N-nutrient concentration, P-nutrient concentration, iron and zinc concentration were the most importantly examined factors. The toxin content was the highest on 17-18 days and at temperatures between 20℃ and 25℃, and at pH between 8.4 and 8.8.

Resolution of Aryl α-Aminoalkyl Ketones on a Doubly Tethered Liquid Chromatographic Chiral Stationary Phase Based on (+)-(18-Crown-6)-2,3,11,12-tetracarboxylic Acid

  • Jin, Kab-Bong;Kim, Hee-Jin;Hyun, Myung-Ho
    • Journal of the Korean Chemical Society
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    • v.55 no.5
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    • pp.751-755
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    • 2011
  • A doubly tethered chiral stationary phase (CSP) based on (+)-(18-crown-6)-2,3,11,12-tetracarboxylic acid was applied to the resolution of various aryl ${\alpha}$-aminoalkyl ketones with the use of 80% ethanol in water containing 10 mM sulfuric acid as a mobile phase. The chiral resolution was quite successful, the separation factors (${\alpha}$) and the resolutions ($R_S$) being in the range of 1.39-2.05 and 3.18-5.22, respectively. The separation factors (${\alpha}$) on the doubly tethered CSP were slightly worse than those on the corresponding singly tethered CSP. However, the resolutions ($R_S$) on the doubly tethered CSP were generally greater than those on the corresponding singly tethered CSP. The chromatographic behaviors for the resolution of aryl ${\alpha}$-aminoalkyl ketones on the doubly tethered CSP were demonstrated to be dependent on the type and the content of the organic and acidic modifiers in aqueous mobile phase and the column temperature.

Geostatistical Interpretation of Water Quality and Hydrogeochemistry of shallow Groundwater in the Uljin Area, Korea (지구통계 기법을 활용한 울진 지역 천부 지하수의 수질 및 수리지구화학 특성 해석)

  • 김남진;윤성택;김형수;정경문;김규범
    • Economic and Environmental Geology
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    • v.34 no.2
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    • pp.175-192
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    • 2001
  • We have collected hydrogeochemical data of shallow groundwaters in the Uljin area located at eastern coastal area of Korea. Geostatistical analysis (ANOVA test, cluster analysis, and factor analysis) of the collected data sets was pert'onned, in order to evaluate both the spatial and/or temporal variation of water quality data and the groundwater contamination, as weJl as the principal reactions occurring in the aquifer. Results of the ANOVA test show that regional water chemistry are not significantly changed spatially in eight watersheds. However, some ions such as $Ca^{2+}$, $HCO_{3}^{-}$ and $SO_{4}^{2-}$ show a meaningful watershed variation. Water chemistry variation according to sampling time (season) is not shown, except for $SO_{4}^{2-}$. The cluster analysis shows that significant water chemistry variation is eXplained by the distance from the coast. Factor analysis indicates that the water chemistry is changed according to various factors as follows: in the order of decreasing importance, water-rock interaction (mainly, carbonate dissolution), sea-salt spraying, and then contamination by fertilizers and agrochemicals.

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Expression of HSP70 mRNA and Protein based on the Thermal Stress in the Primary Hepatocyte Culture of Walleye Pollock (Gadus chalcogrammus) (명태(Gadus chalcogrammus)의 일차 간세포 배양에서 온도 스트레스에 따른 HSP70 mRNA와 단백질 발현)

  • Kim, So-Sun;Lee, Chang-Ju;Park, Jang-Su
    • Journal of Environmental Science International
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    • v.29 no.6
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    • pp.633-641
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    • 2020
  • Water temperature is one of the most important factors of fish survival, affecting the habitat, migration route, development, and reproduction. This experiment studied the induction level of heat shock protein (HSP70) mRNA and protein in a walleye pollock (Gadus chalcogrammus) primary hepatocyte culture based on different temperatures. Hepatocytes were attached at 7.5℃ for 24 hours. Hsp70 induction levels were then measured for 48 hours at 5, 8, 11, 14, and 17℃. The induction level was lowest at 5℃ and generally increased with temperature until 14℃. The induction level was reduced at 17℃, indicating that 14℃ is the highest tolerable temperature for hepatocytes. These data indicate that primary hepatocyte cell culture is under no stress at 5 and 8℃. Temperatures greater than 11℃ induce stress, showing similar induction patterns in both mRNA and protein in hepatocytes. The results suggest that 14℃ is the maximum internal defense temperature of walleye pollock survival.

Analysis of Chemical Warfare Agents in Water Using Single-Drop Microextraction

  • Park, Yang-Gi;Kim, Sung-Ki;Choi, Ki-Hwan;Son, Byung-Hoon;Park, Ju-Sub;Kang, Hong-Ku
    • Bulletin of the Korean Chemical Society
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    • v.30 no.1
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    • pp.49-52
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    • 2009
  • Single-drop microextraction (SDME) is an extraction methodology where the drop plays an essential role as extracts. It was evaluated for the GC-MS determination of nerve agents, one class of the chemical warfare agents (CWAs). Since these nerve agents are highly toxic, it is important to detect the nerve agents in the environmental samples. Several affecting factors including extraction solvents, stirring rate, extraction time, and amounts of salt were optimized. The limit of detections (LODs) were 0.1 - 10 ng/mL and the relative standard deviations (RSDs%, n=5) were in the range of 6.3% to 9.0% for four nerve agents. Without pretreatment of the environmental samples, 5-103 fold enrichments and 48-100% recovery were accomplished. These results demonstrated the feasibility of this method for on-site and off-site analysis of water sample collected from suspicious CWAs site.

Determination of Trace Amounts of Lead and Copper in Water Samples by Flame Atomic Absorption Spectrometry after Cloud Point Extraction

  • Shemirani, Farzaneh;Abkenar, Shiva Dehghan;Khatouni, Asieh
    • Bulletin of the Korean Chemical Society
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    • v.25 no.8
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    • pp.1133-1136
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    • 2004
  • The need for highly reliable methods for the determination of trace metals is recognized in analytical chemistry and environmental science. A method based on the cloud-point extraction (CPE) technique for the trace analysis of Pb and Cu in water samples is described in this study. The analytes in the initial aqueous solution are complexed with pyrogallol, and 0.1%(w/v) Triton X-114 is added as surfactant. Following phase separation at $50^{\circ}C$, based on the cloud point of the mixture and dilution of the surfactant-rich phase with acidified methanolic solution, the enriched analytes are determined by flame atomic absorption spectrometry. After optimization of the complexation and extraction conditions, the enrichment factors of Pb and Cu were found to be 72 and 85, respectively. Under optimum conditions, the preconcentration of 60 mL of samples in the presence of 0.1%(w/v) Triton X-114 permitted the detection of 0.4 ${\mu}gL^{?1}$ of Pb and 0.05 ${\mu}gL^{?1}$ of Cu. The proposed method was applied successfully to the determination of Pb and Cu in water samples.

Assessing Biodiversity of Benthic Macroinvertebrates and Influences of Several Environmental Factors on the Community Structure in Upo Wetland by Long-term Ecological Monitoring

  • Kim, Hyoung-Gon;Lee, Dong-Jun;Yoon, Chun-Sik;Cheong, Seon-Woo
    • Journal of Environmental Science International
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    • v.25 no.4
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    • pp.459-472
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    • 2016
  • We assessed the distribution of benthic macroinvertebrate at four surveying sites in Upo Wetland, a Ramsar site and the largest wetland in Korea, from February 2006 to November 2013. A long-term ecological monitoring was done monthly by using quantitative sampling method with dip net for analyzing the community change and correlation between the biodiversity and the environmental factors because environmental factors have a decisive effect on the community structure of the benthic macroinvertebrates. Total samples from the Upo Wetland area were classified into 3 phyla, 6 classes, 17 orders, 68 families, 176 species, and 25,720 individuals. Among the 176 species, 62 of the species had not been previously reported in this area. Asellus sp., Diplonychus esakii, and Gyraulus chinensis were the most common species in Upo Wetland. The change patterns of annual species diversity and species richness were calculated by using the average number of monthly occurring species and individuals. Diversity index increased from March to May and decreased after that showing lower diversity indices in July and August. It increased again in September and in October. Richness index showed similar tendency and fell around February and July, followed by a rising tendency around May and October. Correlation and regression analyses were performed with the change of biodiversity and each environmental factor. We found that water temperature have very significant positive correlation with species diversity in spring, and have significant indices in autumn and winter. On the other hand, precipitation showed a significantly negative correlation value in summer and autumn suggesting it has an effect on the community structure of benthic macroinvertebrates.

Ni Nanoparticle Anchored on MWCNT as a Novel Electrochemical Sensor for Detection of Phenol

  • Wang, Yajing;Wang, Jiankang;Yao, Zhongping;Liu, Chenyu;Xie, Taiping;Deng, Qihuang;Jiang, Zhaohua
    • Nano
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    • v.13 no.11
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    • pp.1850134.1-1850134.10
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    • 2018
  • Increasing active sites and enhancing electric conductivity are critical factors to improve sensing performance toward phenol. Herein, Ni nanoparticle was successfully anchored on acidified multiwalled carbon nanotube (a-MWCNT) surface by electroless plating technique to avoid Ni nanoparticle agglomeration and guarantee high conductivity. The crystal structure, phase composition and surface morphology were characterized by XRD, SEM and TEM measurement. The as-prepared Ni/a-MWCNT nanohybrid was immobilized onto glassy carbon electrode (GCE) surface for constructing phenol sensor. The phenol sensing performance indicated that Ni/a-MWCNT/GCE exhibited an amazing detection performance with rapid response time of 4 s, a relatively wide detection range from 0.01 mM to 0.48 mM, a detection limit of $7.07{\mu}M$ and high sensitivity of $566.2{\mu}A\;mM^{-1}\;cm^{-2}$. The superior selectivity, reproducibility, stability and applicability in real sample of Ni/a-MWCNT/GCE endowed it with potential application in discharged wastewater.