• Title/Summary/Keyword: variety identification

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NOVEL LEAD STRUCTURES AND MECHANISMS FOR CANCER CHEMOPREVENTION

  • Gerhauser, C.
    • Proceedings of the Korean Society of Toxicology Conference
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    • 2001.10a
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    • pp.35-36
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    • 2001
  • Nutrition influences cancer incidence and offers a variety of preventive dietary factors including non-nutritive plant metabolites. To identify novel potential chemopreventive agents, we have set up cell- and enzyme-based in vitro marker systems relevant for prevention of carcinogenesis in vivo. This experimental approach led to the identification of Xanthohumol (Xn), a prenylated chalcone from hop (Humulus lupulus L.) as a most promising broad-spectrum chemopreventive agent.(omitted)

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Post-GWAS Strategies

  • Kim, Sang-Soo;Bhak, Jong
    • Genomics & Informatics
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    • v.9 no.1
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    • pp.1-4
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    • 2011
  • Genome-wide association (GWA) studies are the method of choice for discovering loci associated with common diseases. More than a thousand GWA studies have reported successful identification of statistically significant association signals in human genomes for a variety of complex diseases. In this review, I discuss some of the issues related to the future of GWA studies and their biomedical applications.

3차원 물체인식을 위한 신경회로망 인식시트메의 설계

  • 김대영;이창순
    • Journal of Korea Society of Industrial Information Systems
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    • v.2 no.1
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    • pp.73-87
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    • 1997
  • Multilayer neural network using a modified beackpropagation learning algorithm was introduced to achieve automatic identification of different types of aircraft in a variety of 3-D orientations. A 3-D shape of an aircraft can be described by a library of 2-D images corresponding to the projected views of an aircraft. From each 2-D binary aircraft image we extracted 2-D invariant (L, Φ) feature vector to be used for training neural network aircraft classifier. Simulations concerning the neural network classification rate was compared using nearest-neighbor classfier (NNC) which has been widely served as a performance benchmark. And we also introduced reliability measure of the designed neural network classifier.

Experimental study of extracting artificial boundary condition frequencies for dynamic model updating

  • Hou, Chuanchuan;Mao, Lei;Lu, Yong
    • Smart Structures and Systems
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    • v.20 no.2
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    • pp.247-261
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    • 2017
  • In the field of dynamic measurement and structural damage identification, it is generally known that modal frequencies may be measured with higher accuracy than mode shapes. However, the number of natural frequencies within a measurable range is limited. Accessing additional forms of modal frequencies is thus desirable. The present study is concerned about the extraction of artificial boundary condition (ABC) frequencies from modal testing. The ABC frequencies correspond to the natural frequencies of the structure with a perturbed boundary condition, but they can be extracted from processing the frequency response functions (FRF) measured in a specific configuration from the structure in its existing state without the need of actually altering the physical support condition. This paper presents a comprehensive experimental investigation into the measurability of the ABC frequencies from physical experiments. It covers the testing procedure through modal testing, the data processing and data analysis requirements, and the FRF matrix operations leading to the extraction of the ABC frequencies. Specific sources of measurement errors and their effects on the accuracy of the extracted ABC frequencies are scrutinised. The extracted ABC frequencies are subsequently applied in the damage identification in beams by means of finite element model updating. Results demonstrate that it is possible to extract the first few ABC frequencies from the modal testing for a variety of artificial boundary conditions incorporating one or two virtual pin supports, and the inclusion of ABC frequencies enables the identification of structural damages without the need to involve the mode shape information.

A Quality Identification System for Molding Parts Using HTM-Based Sound Recognition (HTM 기반의 소리 연식을 이용한 부품의 양.불량 판별 시스템)

  • Bae, Sun-Gap;Han, Chang-Young;Seo, Dae-Ho;Kim, Sung-Jin;Bae, Jong-Min;Kang, Hyun-Syug
    • Journal of Korea Multimedia Society
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    • v.13 no.10
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    • pp.1494-1505
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    • 2010
  • A variety of sounds take place in medium and small-sized manufactories producing many kinds of parts in a small quantity with one press. We developed the identification system for the quality of parts using HTM(Hierarchical Temporal Memory)-based sound recognition. HTM is the theory that the operation principle of human brain's neocortex is applied to computer, suggested by Jeff Hopkins. This theory memorizes temporal and spatial patterns hierarchically about the real world, which is known for its cognitive power superior to the previous recognition technologies in many cases. By applying the HTM model to the sound recognition, we developed the identification system for the quality of molding parts. In order to verify its performance we recorded the various sounds at the moment of producing parts in the real factory, constructed the HTM network of sound, and then identified the quality of parts by repeating learning and training. It reveals that this system gets an excellent and accurate results at the noisy factory.

In Situ Detection and Differential Counts of Bifidobacterium spp. Using Bromocresol Green, a pH-dependent Indicator

  • Kim, Ki-Hwan;Shin, Won-Cheol;Park, Young-Seo;Yoon, Sung-Sik
    • Food Science and Biotechnology
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    • v.16 no.1
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    • pp.99-103
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    • 2007
  • The purpose of this study was to develop a simple detection method, possibly at the species-level, that allows for large-scale screening of bifidobacteria. Human fecal samples were plated on MRS-raffinose agar containing cysteine and neomycin sulfate, serving as selective pressure for bifidobacteria, and 0.003%(w/v) bromocresol green. All of the test strains grew well on this medium at $37{\pm}1^{\circ}C$, forming white colonies surrounded by yellow halos, which presented a sharp contrast against the green background. In this disc assay, the required incubation time to develop a yellowish zone varied with the species of Bifidobacterium that was tested, allowing for differential counts and easy identification at the species-level: 10-14 hr for B. bifidum, 20-22 hr for B. catenulatum and B. infantis. and 24-25 hr for B. longum and B. breve. No apparent color was observed for B. angulatum and B. adolescentis 28 hr after inoculation. To evaluate the results of pH indicator-based identification, individual isolates were subjected to a colony-PCR experiment with genus-specific primers. The amplified products from the isolates were in good accordance with those from the reference strains at a level of 95% agreement. These results suggest that the present method could be conveniently applied to cell counts, as well as to the preliminary identification of bifidobacteria from a variety of sample types including human feces, dairy products, and commercial probiotic supplements.

Quality and genetic relationship on dehulling characteristic in oat variety (국내 귀리품종 탈부특성에 따른 품질 및 유연관계 분석)

  • Kim, Kyeong-Min;Shin, Dongjin;Kim, Kyeong-Hoon;Kwon, Yu-Ri;Park, Hyo-Jin;Hyun, Jong-Nae;Kim, Young-Jin;Oh, Myung-Kyu;Park, Young-Hoon
    • Journal of Plant Biotechnology
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    • v.45 no.4
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    • pp.375-381
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    • 2018
  • The consumption of oats (Avena sativa L.) with high nutritional utility is accelerating due to the increased consumers' demand for functional foods. In Korea, naked oats are used as food, while covered oats are used for animal feed. However, it is difficult to distinguish naked oats from covered oats when the husk is removed from the grains by a special process. The present study was carried out to investigate experimental methods that would be beneficial in the segregation of different types of oats after husk removal. Grain quality-related biochemical compounds were analyzed in a bid to differentiate the oat dehulling characteristics. In addition, 61 SSR markers were examined for genetic relationship and variety identification of oats using five naked and seven covered oat varieties. Results showed that, the contents of protein, lipid, and ${\beta}-glucan$ were not significantly different among the oat varieties and this could not be used as an index for distinguishing oats husk character. However, in the fatty acid composition ratio,, naked oats had a higher ratio of stearic acid (C18:0) and oleic acid (C18:1) than covered oats, and covered oats had a higher ratio of linoleic acid (C18:2) and linoleic acid (C18:3) than naked oats. The assessment of SSR marker genotype revealed that 33 polymorphic bands among 12 oat varieties and 1 variety could be distinguished through the combination of polymorphic markers thus indicating the usability of these markers for variety identification in oats.

Structural Safety Assessment Using Equation Error Function and Response Error Function (방정식 오차함수와 응답 오차함수를 사용한 구조 안전성 평가)

  • Park, Woo-Jin
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.10 no.10
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    • pp.2819-2830
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    • 2009
  • Load bearing structural members in a wide variety of applications accumulate damage over their service life. During experiment much effort and cost is needed for measuring structural safety assessment. The sparseness and errors of measured data have to be considered during the safety estimation of structures. This paper introduces parameter estimation and damage identification algorithm by a system identification using static and dynamic response. The equation error estimator and response error widely used in system identification are based on the minimization of least squared error between measured and calculated responses by a mathematical model of a structure. Since each estimator has a specific form of application in noisy environment and proposes different definitions for these forms. To study the behaviour of the estimators in noisy environment Using Monte Carlo simulation, and a data measured pertubation scheme is adopted to investigate the influence of measurement errors on identification results. The assessment result by static and dynamic response were compared, and the efficiency and applicabilities of the proposed algorithm are demonstrated through simulated static and dynamic responses of a dimensional truss type structures.

Identification of Lettuce Germplasms and Commercial Cultivars Using SSR Markers Developed from EST (EST로부터 개발된 SSR 마커를 이용한 상추 유전자원 및 유통품종의 식별)

  • Hong, Jee-Hwa;Kwon, Yong-Sham;Choi, Keun-Jin;Mishra, Raghvendra Kumar;Kim, Doo Hwan
    • Horticultural Science & Technology
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    • v.31 no.6
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    • pp.772-781
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    • 2013
  • The objective of this study was to develop simple sequence repeat (SSR) markers from expressed sequence tags (EST) of lettuce (Lactuca sativa) and identify 9 germplasms from 3 wild species of lettuce and 61 commercial cultivars using the developed EST-SSR markers. A total of 81,330 lettuce ESTs from NCBI databases were used to search for SSR and 4,229 SSR loci were identified. The highest proportion (59.12%, 2500) was represented by trinucleotide, followed by dinucleotide (29.70%, 1256) and hexanucleotide (6.62%, 280) among SSR repeat motifs. Totally 474 EST-SSR primers were developed from EST and a random set of 267 primers was used to assess the genetic diversity among 9 germplasms and 61 cultivars. Out of 267 primers, 47 EST-SSR markers showed polymorphism between 7 cultivars. Twenty-six EST-SSR markers among 47 EST-SSR markers showed high polymorphism, reproducibility, and band clearance. The relationship between 26 markers genotypes and 70 accessions was analyzed. Totally 127 polymorphic amplified fragments were obtained by 26 EST-SSR markers and two to nine SSR alleles were detected for each locus with an average of 4.88 alleles per locus. Average polymorphism information content was 0.542, ranging from 0.269 to 0.768. Genetic distance of clusters ranged from 0.05 to 0.94 between 70 accessions and dendrogram at a similarity of 0.34 gave 7 main clusters. Analysis of genetic diversity revealed by these 26 EST-SSR markers showed that the 9 germplasms and 61 commercial cultivars were discriminated by marker genotypes. These newly developed EST-SSR markers will be useful for cultivar identification and distinctness, uniformity and stability test of lettuce.

Spatial Analysis Methods for Asbestos Exposure Research (석면노출연구를 위한 공간분석기법)

  • Kim, Ju-Young;Kang, Dong-Mug
    • Journal of Environmental Health Sciences
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    • v.38 no.5
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    • pp.369-379
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    • 2012
  • Objectives: Spatial analysis is useful for understanding complicated causal relationships. This paper focuses trends and appling methods for spatial analysis associated with environmental asbestos exposure. Methods: Literature review and reflection of experience of authors were conducted to know academic background of spatial analysis, appling methods on epidemiology and asbestos exposure. Results: Spatial analysis based on spatial autocorrelation provides a variety of methods through which to conduct mapping, cluster analysis, diffusion, interpolation, and identification. Cause of disease occurrence can be investigated through spatial analysis. Appropriate methods can be applied according to contagiousness and continuity. Spatial analysis for asbestos exposure source is needed to study asbestos related diseases. Although a great amount of research has used spatial analysis to study exposure assessment and distribution of disease occurrence, these studies tend to focus on the construction of a thematic map without different forms of analysis. Recently, spatial analysis has been advanced by merging with web tools, mobile computing, statistical packages, social network analysis, and big data. Conclusions: Because the trend in spatial analysis has evolved from simple marking into a variety of forms of analyses, environmental researchers including asbestos exposure study are required to be aware of recent trends.