• 제목/요약/키워드: unidentified species

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소, 돼지, 닭의 호흡기병과 설사에 대한 Norfloxacin 주사 및 경구용 제제의 야외치료시험 (A Field Trial of Norfloxacin on Bovine, Swine and Poultry with Respiratory Diseases and Diarrhea)

  • 손봉환;황현순;김정훈;한태호;배도권
    • 한국동물위생학회지
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    • 제14권2호
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    • pp.159-174
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    • 1991
  • A field trial of norfloxacin on bovine 206, swine 222 and poultry 205 with respiratory diseases and diarrhea was conducted from Sept 1, 1990 to Jan 30, 1991 in Inchon and Kyonggi-do. The results are as follows. 1. Guinea pigs and rabbits were dosages 10 and 20 times normal. Ten days of observation saw no side effect. 2. Oral treatment on bovine, swine and poultry showed a curing rate of 82.00∼89.06%(Mean 86.00%), compared with 87.27∼96.36%(Mean 92.24%) by Injection. 3. The curing rate was 81.92% by the fourth treatment. 4. The curing rate with and without the use of adjuvant was 80.00∼100% and 83.60∼93. 10%, respectively, for swine, and 81.82∼100% and 82.00∼97.14% for bovine. 5. The curing rate was more dependent on seriousness of illness, environment and time than age. 6. The main disease causing bacteria of bovine respiratory diseases: Haemolytic Sta 27.62%, Haemolytic Str 33.33%, sum of this bacteria is 60.95%, diarrhea: Haemolytic coliform 80.20%, swine respiratory diseases; Haemophilus Spp 20.95%, Haemolytic Sta 72%, Haemolytic Str 21.90%, Sum of these bacteria is 68.57%, diarrhea; Haemolytic coliform 57.26%, poultry respiratory diseases; mycoplasma Spp 29.52%, Haemolytic Sta 13.33%, Sum of this bacteria is 42.85%, diarrhea; Haemolytic coliform 53.00%. 7. The curing rate of norfloxacin by species of strain, the unidentified bacteria on bovine respiratory diseases was the lowest with 77.78%, the others ranged from 84.21% to 100% with most of them over 90%. 8. The loss of clinical sign on bovine and swine was the highest when after 2∼4 application. 9. In terms of antibiotic sensitivity test, norfloxacin was the highest with 84.62∼100% (mean 90.09%) among eight bacterias, only 5 of 15 antibiotics had a sensitivity of over 56.25%, showing a high degree of tolerance.

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바이칼 호 Sponge에 서식하는 세균 군집 구조의 분석 (Community Analysis of the Bacteria in Sponges of Lake Baikal by FISH Method)

  • 서은영;김미리;안태석
    • 미생물학회지
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    • 제43권1호
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    • pp.14-18
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    • 2007
  • 바이칼호에 서식하는 있는2속(genus Baikalospongia와 Lubomirskia)(5.13)의 해면 내에 서식하고 있는 세균군집 구조를 조사하기 위하여 fluorescent in situ hybridization (FISH) 방법을 적용하였다. Baikalospongia와 Lubomirskia 속에 속하는 해면에 서식하는 총세균수는 각각 $7.2{\times}10^{7}-4.2{\times}10^{8}\;cells/ml$$1.2{\times}10^{8}-1.6{\times}10^{8}\;cells/ml$였다. 인근 호숫물의 총세균수는 $2.3{\times}7.7{\times}10^{5}\;cells/ml$ 범위로 해면에 서식하는 총세균수가 약 $10^{3}-10^{4}$배 더 높았다. 총세균수에 대한 세균군집 구조의 비율은 ${\alpha}-,\;{\beta}-,\;{\gamma}-Proteobacteria\;group$과 Cytophaga-Flavobacterium group외 다른 세균군이 genus Baikalospongia는 42.0-60.3%, Lubomirskia에서는 40.7-51.9%로, 호수물에서는 22.6-46.3%와 같이 나타났다. 이는 일반 담수에서 특정 군집이 우점하는 경향과는 다른 것으로써, 바이칼의 호숫물과 해면에 있는 세균들은 독특한 군집구조를 이루고 있음을 확인하였다.

활성슬러지에서 단리한 Acinetobacter sp.에 의한 원유탄화수소분해 (Biodegradation of crude oil hydrocarbons by Acinetobacter sp. isolated from activated sludge)

  • Dong-Hyuk CHOI;Dong Hoon LEE
    • 한국토양환경학회지
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    • 제5권1호
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    • pp.97-108
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    • 2000
  • 원유를 탄소원으로 이용할수 있는 그람 음성 박테리아가 도시하수 처리장의 활성슬러지로부터 단리되어 Acinetobacter속으로 동정되었다. 이 균은 원유중의 알칸과 미확인된 다종의 한화수소를 분해할 수 있었으며 소수성 기질인 알칸을 단일 탄소원으로 이용하여 증식할수 있었다. 원유중 탄소수 13-30의 알칸은 동시에 분해가 진행되었으며 한소수의 짝수, 홀수에 따른 분해특성의 차이는 보이지 않았다. 균의 선형적인 증식과 알칸 성분의 분해특성으로부터, 원유상에서 기질의 초기 산화가 진행되는 미생물부위까지 물질전달이 분해과정의 율속이 됨을 알수 있었다. 분해 진행후 반응계내 알칸의 잔류 현상이 관찰되었는데 이는 Acinetobacter 속의 특성으로 알려져있는 세포내 탄화수소 함유체의 영향으로서 원유로 부터의 물질전달을 제어하는 요인이 될수 있음을 시사하였다. 따라서 본 균은 환경중 잔류하는 소수성 오염물질의 분해메카니즘 연구에 중요한 역할을 한다고 사료된다.

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A Fosmid Cloning Strategy for Detecting the Widest Possible Spectrum of Microbes from the International Space Station Drinking Water System

  • Choi, Sangdun;Chang, Mi Sook;Stuecker, Tara;Chung, Christine;Newcombe, David A.;Venkateswaran, Kasthuri
    • Genomics & Informatics
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    • 제10권4호
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    • pp.249-255
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    • 2012
  • In this study, fosmid cloning strategies were used to assess the microbial populations in water from the International Space Station (ISS) drinking water system (henceforth referred to as Prebiocide and Tank A water samples). The goals of this study were: to compare the sensitivity of the fosmid cloning strategy with that of traditional culture-based and 16S rRNA-based approaches and to detect the widest possible spectrum of microbial populations during the water purification process. Initially, microbes could not be cultivated, and conventional PCR failed to amplify 16S rDNA fragments from these low biomass samples. Therefore, randomly primed rolling-circle amplification was used to amplify any DNA that might be present in the samples, followed by size selection by using pulsed-field gel electrophoresis. The amplified high-molecular- weight DNA from both samples was cloned into fosmid vectors. Several hundred clones were randomly selected for sequencing, followed by Blastn/Blastx searches. Sequences encoding specific genes from Burkholderia, a species abundant in the soil and groundwater, were found in both samples. Bradyrhizobium and Mesorhizobium, which belong to rhizobia, a large community of nitrogen fixers often found in association with plant roots, were present in the Prebiocide samples. Ralstonia, which is prevalent in soils with a high heavy metal content, was detected in the Tank A samples. The detection of many unidentified sequences suggests the presence of potentially novel microbial fingerprints. The bacterial diversity detected in this pilot study using a fosmid vector approach was higher than that detected by conventional 16S rRNA gene sequencing.

효모균에 의한 젖소 유방염과 유두컵내의 오염상태 (Prevalence of yeasts in bovine mammary gland infections and teat cups of milking machines)

  • 여상건;정규영;조희택
    • 대한수의학회지
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    • 제28권2호
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    • pp.361-363
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    • 1988
  • 진주근교에서 효모균에 의한 젖소의 준임상형 유방염 발생상황과 이들균의 유두컵내의 오염상태를 조사하였던 결과는 다음과 같다. 총 검사분방 330개 중 12분방으로부터 효모균이 분리되어 이로인한 준임상형 유방염의 발생율은 3.6%이었다. 분리균 12주는 Candida pseudotropicalis 4주, C tropicalis 3주, C krusei 2주, C albicans 2주 및 Rhodotorula spp 1주로 동정되었으며, 분리균의 91.7%가 Candida속 균이었다. 유두컵 200개 중 20.5%로부터 C. pseudotropicalis 13주, C guilliermondii 9주, C tropicalis 7주, C krusei 5주, C parapsilosis 5주, C albicans 3주, Torulopsis glabrata 2주, Geotrichum candidum 2주 및 미동정 효모균 5주가 분리되었다.

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Wisteria Vein Mosaic Virus Detected for the First Time in Iran from an Unknown Host by Analysis of Aphid Vectors

  • Valouzi, Hajar;Hashemi, Seyedeh-Shahrzad;Wylie, Stephen J.;Ahadiyat, Ali;Golnaraghi, Alireza
    • The Plant Pathology Journal
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    • 제36권1호
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    • pp.87-97
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    • 2020
  • The development of reverse transcription-polymerase chain reaction using degenerate primers against conserved regions of most potyviral genomes enabled sampling of the potyvirome. However, these assays usually involve sampling potential host plants, but identifying infected plants when they are asymptomatic is challenging, and many plants, especially wild ones, contain inhibitors to DNA amplification. We used an alternative approach which utilized aphid vectors and indicator plants to identify potyviruses capable of infecting common bean (Phaseolus vulgaris). Aphids were collected from a range of asymptomatic leguminous weeds and trees in Iran, and transferred to bean seedlings under controlled conditions. Bean plants were tested serologically for potyvirus infections four-weeks postinoculation. The serological assay and symptomatology together indicated the presence of one potyvirus, and symptomology alone implied the presence of an unidentified virus. The partial genome of the potyvirus, encompassing the complete coat protein gene, was amplified using generic potyvirus primers. Sequence analysis of the amplicon confirmed the presence of an isolate of Wisteria vein mosaic virus (WVMV), a virus species not previously identified from Western Asia. Phylogenetic analyses of available WVMV sequences categorized them into five groups: East Asian-1 to 3, North American and World. The Iranian isolate clustered with those in the World group. Multiple sequence alignment indicated the presence of some genogroup-specific amino acid substitutions among the isolates studied. Chinese isolates were sister groups of other isolates and showed higher nucleotide distances as compared with the others, suggesting a possible Eastern-Asian origin of WVMV, the main region where Wisteria might have originated.

황화수소 산화세균인 새로운 Thiobacillus sp.의 분리 및 특성 (Isolation and Characterization of a New Hydrogen Sulfide-Oxidizing Bacterium Thiobacillus Sp.)

  • 차진명;이인화
    • 미생물학회지
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    • 제32권4호
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    • pp.252-257
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    • 1994
  • 황화수소 산화세균인 Thiobacillus sp.를 전남 화순의 폐탄광수에서 분리하였다. 분리된 균주는 그람음성의 운동성이 있고, 포자를 형성하는 간균이었으며, 환원된 무기 황화합물을 산화하여 에너지원으로 사용하는 호기성 통성 화학합성 영양균이었다. 분리균주는 thiosulfate를 첨가한 기본배지에서 유기물을 동화하며 성장하였고, 에너지원으로 사용된 thiosulfate는 32mM 이상의 농도에서는 오히려 기질억제 인자로 작용하여 균의 성장을 억제하였다. 최적 thiosulfate 농도는 32mM이었다. DNA의 G+C 함량은 65.0mol%이고, 세포내 주요 지방산중 비순산화 지방산은 16:1+7$_{cyc}$, 16:0과 수산화 지방산은 3-OH 12:0을 가지며, $C_{18}$의 미동정 가지형의 지방산도 포함하고 있었다. Ubiquinone system은 Q-9을 가지고 있었다. 위와 같은 생리생화학적 특성 결과로부터, 본 분리균주는 Thiobacillus sp. iw.의 새로운 종으로 판단하였다.

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Stock identification of minor carp, Cirrhinus reba, Hamilton 1822 through landmark-based morphometric and meristic variations

  • Ethin, Rokhsana;Hossain, Md Shakhawate;Roy, Animesh;Rutegwa, Marcellin
    • Fisheries and Aquatic Sciences
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    • 제22권6호
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    • pp.12.1-12.8
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    • 2019
  • Background: Wild fish populations stock is continuously diminishing in the Indo-Ganges river basin, and the population status of most fishes is unidentified. The identification of the population status and the conservation of commercially important and endemic wild fish populations in this region are crucial for the management. The aim of this paper was to identify the population status of Cirrhinus reba, a promising aquaculture but vulnerable species in the Indo-Ganges river basin in Bangladesh. Methods: C. reba samples were collected from four isolated populations of the Brahmaputra (n = 30), the Padma (33), the Karatoya (31), and the Jamuna Rivers (30) in Bangladesh, and the population status was evaluated using morphometric and landmark comparisons. Data were analyzed with the Kruskal-Wallis test, univariate analysis, discriminant function analysis, and the formation of a dendrogram. Results: Three meristic characters (Pectoral fin rays, caudal fin rays, scale in lateral lines), four morphometric characters (head length, pre-orbital length, post-orbital length, maximum body depth), and truss measurement (4-7) were significantly different among the stocks. The step-wise discriminant function analysis retained 15 variables from morphometric and landmark measurements that significantly differentiated the populations based on the constructed DFI and DFII. Discriminate function analysis also showed that 91.2% of the original groups were classified into their correct samples. The cluster analysis of Euclidean distances placed the Jamuna population in one cluster and the Brahmaputra, the Padma, and the Karatoya populations in the second one. Conclusion : Morphological differences among the stock were probably due to different ancestral origin. This is the first report about population status of C. reba in their natural habitat of the Indian subcontinent. Further genetic studies and the evaluation of environmental impact on C. reba populations in Bangladesh are suggested to support our findings.

Analysis of Phylogenetic Relationship of 30 Cultivars of Korean Mulberry (Rosales: Moraceae) in Korea

  • Kwon, O-Chul;Kim, Hyun-Bok;Sung, Gyoo-Byung;Kim, Yong-Soon;Ju, Wan-Taek
    • International Journal of Industrial Entomology and Biomaterials
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    • 제37권2호
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    • pp.82-89
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    • 2018
  • This study was carried out to understand phylogenetic relationships of the 30 mulberry cultivars converved in Korea based on the ITS rDNA region, and they were compared to 40 reference sequences from GenBank. The size and the G+C content of the ITS rDNA gene regions from the 30 Korean mulberry cultivars and 40 reference sequences varied from 612-630 bp and 58.19-61.62%, respectively. Based on the results of the comparative phylogenetic analysis of the ITS rDNA regions of the 30 Korean mulberry cultivars and 40 reference sequences, they were divided into three groups (Group 1, 2, and 3) and two subgroups (Group 1A and 1B within Group 1). The sequence lengths of the Korean mulberry cultivar numbers 1-26 and 27-30 were 615 bp and 616 bp, respectively. At 205 bp location of ITS1 rDNA region, the cultivar numbers 1-26 contain the nucleotide thymine but the cultivar numbers 27-30 contain the nucleotide adenine. In addition, the insertion of the nucleotide adenine at 206 bp location was found only in the four Korean mulberry cultivars (numbers 27-30). Based on these sequence information and phylogenetic result, the 30 Korean mulberry cultivars were identified as M. alba and M. australis. This study will contribute to the construction of genetic database constructions and accurate variety identifications for unidentified mulberry varieties in Korea.

20세기초에 채집된 한반도 고표본 (II) (Historic specimens collected from the Korean Peninsula in the early 20th century (II))

  • 선은미;장계선;손현덕;임형탁
    • 식물분류학회지
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    • 제49권3호
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    • pp.240-252
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    • 2019
  • 20세기초 한반도에서 채집된 고표본들은 한국전쟁 동안 대부분이 소실되었으나, 일본 도쿄대학교 표본관(TI)에 소장된 한반도 고표본들은 온전하게 보존되어 있다. 북한 식물에 대한 정보를 얻을 수 없는 현 상황에서 TI의 한국산 고표본 정보는 매우 중요하다. TI 수장고에서 최근 확인된 미동정 상태의 한반도 고표본을 동정하여 목록을 작성했으며, 중복채집품(duplicate)을 확보했다. 곤충학자인 Ikuma Yoichiro는 1913년 8월 1일부터 23일까지 청진에서 백두산을 거쳐 혜산진에 이르는 일정 동안 60과 177속 240종류의 식물을 채집했다.