• Journal of Microbiology and Biotechnology
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• v.20 no.12
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• pp.1637-1646
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• 2010

The bacterium Deinococcus radiodurans is one of the most resistant organisms to ionizing radiation and other DNA-damaging agents. Although, at present, 30 Deinococcus species have been identified, the whole-genome sequences of most species remain unknown, with the exception of D. radiodurans (DRD), D. geothermalis, and D. deserti. In this study, comparative genomic hybridization (CGH) microarray analysis of three Deinococcus species, D. radiopugnans (DRP), D. proteolyticus (DPL), and D. radiophilus (DRPH), was performed using oligonucleotide arrays based on DRD. Approximately 28%, 14%, and 15% of 3,128 open reading frames (ORFs) of DRD were absent in the genomes of DRP, DPL, and DRPH, respectively. In addition, 162 DRD ORFs were absent in all three species. The absence of 17 randomly selected ORFs was confirmed by a Southern blot. Functional classification showed that the absent genes spanned a variety of functional categories: some genes involved in amino acid biosynthesis, cell envelope, cellular processes, central intermediary metabolism, and DNA metabolism were not present in any of the three deinococcal species tested. Finally, comparative genomic data showed that 120 genes were Deinococcus-specific, not the 230 reported previously. Specifically, ddrD, ddrO, and ddrH genes, previously identified as Deinococcus-specific, were not present in DRP, DPL, or DRPH, suggesting that only a portion of ddr genes are shared by all members of the genus Deinococcus.

• Korean Journal of Ichthyology
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• v.23 no.2
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• pp.150-157
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• 2011

In this study we described reproduction study of Korean endemic species, Acheilognathus koreensis and three other acheilognathinae species A. signifer, Rhodeus pseudosericeus, and R. uyekii. Morphology of egg shape and larvae just hatched is unique by the species respectively. There is no interrelation factor between size of female and number of spawned eggs per one time. Minium water temperature for spawning of A. koreensis was observed in $13.0^{\circ}C$ having low hatching rate with 43.5 percent. The egg of A. koreensis began to hatch approximately 79 hours after insemination. As higher as water temperature until $22.0^{\circ}C$ hatching elapsed time for developing eggs of A. koreensis and three species in this study was shortened. A. koreensis was grew up to be a adult enough which can be join to new production for three hundred days after hatching with 52.4 mm in total length. This reproduction study will be applied to preservation of Korean endemic fresh water fishes basically.

• Mycobiology
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• v.33 no.1
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• pp.23-29
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• 2005

The effects of different concentrations of three amino acids as carbon and or nitrogen sources on mycelial dry weights, changes in pH values of synthetic medium, ammonia secretion and extracellular protease activity by three zoosporic fungi, pathogens of fish and shellfish, were studied. As compared with the control, the addition of isoleucine and aspartic acid as nitrogen sources were generally stimulative for mycelial dry weight production whereas phenylalanine was inhibitory irrespective to the tested fungal species. When amino acids served as carbon and nitrogen sources, the mycelial dry weights of the three fungi were increased (mostly non-significantly) relative to untreated control but weights were decreased as the concentrations of the three amino acids raised. The addition of individual amino acids as carbon and nitrogen sources to the medium significantly increased pH values of the medium comparable to the control. The addition of each of the three amino acids as carbon and nitrogen sources to the medium significantly induced ammonia secretion by the three species of zoosporic fungi. Ammonia secretion in synthetic medium amended with amino acids as nitrogen source raised by the three zoosporic fungi relative to untreated control except in case of Achlya racemosa treated with isoleucine. Extracellular protease activity was almost promoted in case of Achlya proliferoides and Saprolegnia furcata cultures treated with isoleucine and aspartic acid individually in presence of glucose and vice versa in case of phenylalanine. However, extracellular protease activity of A. racemosa decreased compared with the control at various concentrations of isoleucine and both phenylalanine and aspartic acid assumed inconsistent effects. Extracellular protease activity of the three zoosporic fungi in the medium devoid of glucose varied depending upon zoosporic fungal species, the tested amino acid and the applied concentrations. The values of protease activity were approximately less two folds than that obtained in presence of glucose.

• Journal of Ecology and Environment
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• v.36 no.4
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• pp.371-390
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• 2013

Remarkable diversity of diatom taxa occurs in intertidal sand-flats of the Nakdong River estuary, one of the most dynamic and productive ecosystem in Korea. Benthic diatoms were collected from the sandy sediments to clarify the taxonomic accounts and distribution of the old genus Navicula, i.e., the naviculoid flora. Total 92 taxa belonging to Navicula sensu stricto and 22 genera separated from Navicula sensu lato are reported with brief descriptions and micrographs, and many species remain unidentified. The genera are ranked by the number of diatom species: Navicula of 33 species and varieties, Fallacia of 17 species, Placoneis of five species, Fogedia and Parlibellus of four species, Austariella, Hippodonta and Petroneis of three species, Cosmioneis, Diadesmis, Luticola, Moreneis and Sellaphora of two species and variety, Berkeleya, Chamaepinnularia, Cocconeiopsis, Diademoides, Dickieia, Eolimna, Geissleria, Haslea, Lyrella and Mayamaea of one species. Through 32 samplings of the 12 areas, the important species were identified Navicula perminuta, N. gregaria, N. torneensis, Fallacia cunoniae, F. litoricola, F. subforcipata, F. tenera. The naviculoid diatoms constitute an average of 27% (range: minimum to maximum, 5-75%), of the benthic diatom assemblages. The diatom assemblages are characterized by the colonizing of a few dominant or frequent species and many occasional or rare species. The dominant species were observed to fluctuate with sampling site and time. Among the reported naviculoid diatoms, 46 taxa are newly reported in Korea.

• Korean Journal of Environmental Biology
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• v.33 no.2
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• pp.112-118
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• 2015

A new species of the genus Ebrechtella Dahl, Ebrechtella juwangensis n. sp. and the male of Ozyptila geumoensis Seo and Sohn, 1997 are reported new to science. Ozyptila utotchkini Marusik, 1990 is reported for the first time in Korea. Habitus photos and illustrations of these three species are provided.

• Korean Journal of Environmental Biology
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• v.33 no.2
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• pp.105-111
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• 2015

A new species of the genus Robertus Pickard-Cambridge, Robertus subtilis n. sp. is described from Mt. Odae in Gangwon Province, Korea. Theridion serpatusum Guan and Zhu, 1993 and Lathys annulata ${B\ddot{o}senberg}$ and Strand, 1906 are reported for the first time in Korea. Habitus photos and illustrations of these three species are provided.

• Mycobiology
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• v.39 no.1
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• pp.61-63
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• 2011

Taxonomic study of the crustose lichen Porpidia was performed in this paper. Three species are described, including two recorded species and one new record: Porpidia macrocarpa (DC.) Hertel & A. J. Schwab. A description of each species is presented along with morphological, anatomic, and chemical characteristics. A key to the identification of species of Porpidia is also presented.

• Animal Systematics, Evolution and Diversity
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• v.12 no.1
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• pp.25-31
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• 1996

Genus Gabronthus from Korea is firstly investigated. Three species are identified. Of them, two species, G. tenuicorpus and G. chejuensis, are new species, and G. sulcifrons is newly recorded in Korea. A taxonomic key and species descriptions are presented.

• The Korean Journal of Ecology
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• v.21 no.4
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• pp.345-349
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• 1998

thirteen dictyostelid cellular slime molds were isolated from forest soils, cattle dung and manure inisland Ulneungdo, South Korea. They were ten species including Dictyostelium aureo-stipes var. aureo-stipes, D. brefeldianum, D. macrocephalum, D. caudabasis, D. sphaerocephalum, D. giganteum, D. crassicaule, Polysphondylium pallidum, P. violaceum and P. tenuissimum as well as three species unidentified. D. aureo-stipes var. aureo-species of genus Polysphondylium distributed widely. It was thought that species diversi쇼 was considerabley higher.

• Korean journal of applied entomology
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• v.28 no.1
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• pp.4-9
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• 1989

One species of pin-hole bore and fifty-two species of bark and ambrosia beetles were collected in 1987. Of fifty-three species, two species, Hylurgops palliatus and Xyleborus amputatus were recorded for the first time to the fauna.