• The Bulletin of The Korean Astronomical Society
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• v.41 no.1
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• pp.56.1-56.1
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• 2016

Surface mineralogy of asteroids are inferred from photometric and spectroscopic observations with the wide range of wavelengths spanning from far-ultraviolet to mid-infrared. We classify mineralogy of those objects based on their spectral absorption features and spectral slopes. Based on overall spectral shapes, mineralogical classes are divided into three broad complexes; silicates (S), carbonaceous (C) and Vestoids (V), and the end-members that do not fit within the S, C and V broad-complexes. Each of them is subdivided into individual classes. Spectral classification of asteroidal objects has been simply represented by a combination of photometric colors. For a decade, photometric data of asteroids have been grouped and classified according to their SDSS colors converted from the spectral taxonomy. However, systematic studies for asteroid taxonomy based on Johnson-Cousins filters is few, and were conducted only with a small number of objects. In this paper, we present our preliminary results for taxonomic classification of Main Belt asteroids based on KMTNet Johnson-Cousins photometric color system.

• Korean Journal of Ichthyology
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• v.36 no.1
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• pp.84-93
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• 2024

The sharks identified in the coastal waters of Korea are known to date to 9 Orders, 21 Families, 32 Genera and 47 Species. Therefore, recent studies and records of shark appearance in Korean waters were reviewed and organized. As a result, Halaelurus buergeri was separated from the Family Scyliorhinidae into the Family Pentanchidae based on the supraorbital crest absent on cranium above eyes. Accordingly, compared to the previous study, Family Pentanchidae, Genus Hexanchus, and 2 Species Hexanchus griseus and the Alopias superciliosus were added, resulting in a total of 49 species of sharks in 9 Orders, 22 Families, and 33 Genera in coastal waters of Korea. A list of these species, a search table, and the history of scientific name changes are provided, and proposed a new Korean name of 'Bul-beom-sang-eo-gwa' of the Family Pentanchidae.

• Journal of Species Research
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• v.11 no.4
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• pp.343-345
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• 2022

The classification system of Collybiopsis has been updated to contain some species of Collybiopsis, Gymnopus sect. Vestipedes, and Marasmiellus. Recently, we conducted the taxonomic study of Korean Collybiopsis to reflect the current classification system and confirmed 16 species. We propose their Korean names in this research note.

• Korean Journal of Ichthyology
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• v.2 no.2
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• pp.117-137
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• 1990

The morphological characters of the family Bagridae living in the river systems flowing into the south and western seas of Korea were reviewed and a taxonomic revision was made. The family Bagridae was classified into two genera: Pseudobagrus and Leiocassis. Species corresponding to genus Pseudobagrus were P. fulvidraco, P. koreanus Uchida, sp. nov., P. brevicorpus, and genus Leiocassis were L. nitidus, L. ussuriensis, and L. longirostris. Among them Pseudobagrus koreanus Uchida, sp. nov. and P. brevicorpus are endemic species of Korea. As the intergeneric taxonomic characters, the outstanding morphological differences between genera Pseudobagrus and Leiocassis were distinguished in following characters; the serrated structure of pectoral spine, the length of barbels, the number of pectoral fin rays, the structure of cranial lateral line system and the fused state of 3-4 hypurals. Pelteobagrus fulvidraco and Coreobagrus brevicorpus recorded previously in Korea were classified as Pseudobagrus fulvidraco and P. brevicorpus, respectively. Pelteobagrus nitidus and Pseudobagrus ussuriensis are also changed to genus Leiocassis. The characters of interspecific classification belonging to genera Pseudobagrus and Leiocasis were the shape of caudal fin, the form of body, the length of body, the number of anal fin ray and the number of gill rakers. Pseudobagrus sp. was named into Pseudobagrus koreanus Uchida, sp. nov..

• Journal of Species Research
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• v.9 no.3
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• pp.233-246
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• 2020

A scientific name is one of changeable terms in biology whenever additional research results of specific taxa is accumulated. The Database of the National Species List of Korea (DBNKo) was developed to manage taxonomic information of Korean species, designed to describe the changeable and complex taxonomical structure and information. A Korean Taxonomical Serial Number (KTSN) was assigned to each taxon, different from the normally used systems that the scientific name was considered as primary key to manage higher rank of taxa systematically. Common names were also treated with the KTSN, reflecting that common name is considered as one type of taxon. Additional taxonomic information (e.g., synonyms, original names, and references) was also added to the database. A web interface with an intuitive dashboard presenting taxonomic hierarchical structure is provided to experts and/or managers of the DBNKo. Currently, several biological databases are available in the National Institute of Biological Resources (NIBR) such as a specimen database, a digital library, a genetic information system, and the shared species data based on the DBNKo. The DBNKo started sharing species information with other institutions such as the Nakdonggang National Institute of Biological Resources. It is an ideal centralized species database to manage standardized information of Korean species.

• Korean Journal of Plant Taxonomy
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• v.37 no.3
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• pp.309-321
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• 2007

Korea national arboretum has worked with the plant taxonomic society of Korea to make the first fully electronic floristic checklist in Korea. The result is an ever-expanding online plant name index containing scientifically authorative, up-to-date information on the approximately 7,000 taxa including cultivars. With 37 contributing taxonomists, KPNI is the largest collaborative research projects ever assembled in Korea. A comprehensive database model for the taxonomic data from literature and other sources is presented, which was devised for the Korea National Plant Index database project (KPNI). Gwangreung database model is based on an approach using entity-relationsip diagram. It encompasses taxa of all ranks, nothotaxa and hybrid formulae, cultivars, full synonymy, basionyms, Korean name, and other nomenclatural information. Ths paper presents an analysis of KPNI work processes and an overview how we are approaching the construction of Gwangreung databaese model. It can help the system engineers of other biological information systems to develop their database based on the accurate and integrative taxonomic database.

• Parasites, Hosts and Diseases
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• v.29 no.1
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• pp.55-66
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• 1991

A numerical taxonomy was studied on a group of heterophyid trematodes and analysis was made on the following species: Metagonimus yokogawai (3 OTU, Operational Taxonomic Unit) , Metagcnimus Miyata Type (3 OTU), Metagonimus takahashii (2 OTU), Heterophyes dispar (2 OTU), Heterephyes heterophyes (1 OTU), Heterophyes nocens (2 OTV), Heterophyopsis continua (1 OTU), Pygidiopsis summa (3 OTU), Stellantchasmus falcatus (2 OTU) and Stictodora sari (2 OTU). Twenty-six morphological characters were measured and their values were expressed as relative ratios. Similarity and correlation matrix among each individuals were calculated. Clustering analysis by Ward's method and factor analysis were performed using the SAS (Statistical Analysis System) package. As a results, the groups belonging to the genus of Metegenimus were divided into three phonons (Awetegonimus yokogawai, Metegcnimus Miyata Type, M. takahashii) , and Metagonimus Miyata Type was classified as the level of subspecies of M. takahashii. The groups belonging to the genus Heterophyes were clearly divided into three phonons (Heterophyes dispar, H. heterephyes, H. nocens), and H. nccens was classified as not a subspecies level of H. heterophyes but a distinct species. Other species were classified as distinct phonons. From these results, the appllcr lion of numerical taxonomy on trematode classification is considered to be a great aid to determine the limit of taxa.

• The Korean Journal of Mycology
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• v.4 no.1
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• pp.1-10
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• 1976

For the purpose of investigating the distribution and flora of wild mushrooms in Korea, this study was conducted primarily on the genus Amanita. Through survey of Suweon, Kwangneung, Mt. Chiri, Taegwanryung, Yeongdong district and Mt. Hanta, 25 species of Amanita including 3 unrecorded species were discovered and are described in this paper. The author proposes to group 25 Korean species of Amanita into 3 subgenera according to morphological characteristics by the modern taxonomic system, and also designated the 3 unrecorded species of Amanita including one variety in Korean common name.

• Mycobiology
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• v.32 no.1
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• pp.24-34
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• 2004

Molecular approaches, internal transcribed spacer(ITS) sequences of ribosomal DNA, and Universal Rice Primer Polymerase Chain Reaction(URP-PCR) were used to investigate the genetic diversity, taxonomic complexity, and relationships of Trichoderma species in mushroom farms. Forty-one isolates of 13 Trichoderma spp. were used in this study and clustered into eight groups. The DNA fingerprint patterns and ITS1 region sequence alignment data showed similar results, but not in some species, such as T. virens, T. atroviride, T. harzianum, and T. aureoviride. Results of this study have proven that the morphology-based taxonomic system has some limitations in terms of classification. The data obtained in this study would be a good index for classifying indistinguishable Trichoderma strains.

• Journal of Korean Dental Science
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• v.16 no.1
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• pp.35-46
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• 2023

Purpose: Culture-based methods for microbiological diagnosis and antibiotic susceptibility tests have limitations in the management of orofacial infections. We aimed to profile pus microbiota and identify antibiotic resistance genes (ARGs) using a culture-independent approach. Materials and Methods: Genomic DNA samples extracted from the pus specimens of two patients with orofacial abscesses were subjected to shotgun sequencing on the NovaSeq system. Taxonomic profiling and prediction of ARGs were performed directly from the metagenomic raw reads. Result: Taxonomic profiling revealed obligate anaerobic polymicrobial communities associated with infections of odontogenic origins: the microbial community of Patient 1 consisted of one predominant species (Prevotella oris 74.6%) with 27 minor species, while the sample from Patient 2 contained 3 abundant species (Porphyromonas endodontalis 33.0%; P. oris 31.6%; and Prevotella koreensis 13.4%) with five minor species. A total of 150 and 136 putative ARGs were predicted in the metagenome of each pus sample. The coverage of most predicted ARGs was less than 10%, and only the CfxA2 gene identified in Patient 1 was covered 100%. ARG analysis of the seven assembled genome/metagenome datasets of P. oris revealed that strain C735 carried the CfxA2 gene. Conclusion: A metagenomics-based approach is useful to profile predominantly anaerobic polymicrobial communities but needs further verification for reliable ARG detection.