• 제목/요약/키워드: taxonomic distance

검색결과 79건 처리시간 0.021초

Cluster분석에 의한 재래종 담배 품종의 분류에 관하여 (Varietal Classification on the Basis of Cluster Analysis in Local Tobacco)

  • 안대진;김윤동
    • 한국연초학회지
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    • 제4권1호
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    • pp.37-42
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    • 1982
  • Korean local and introduced varieties were classified by the cluster analysis of correlation and taxonomic distance based on nineteen growth characters. 1. Thirty six varieties can be classified into three groups(I, II, III) by WVGM (weighted variable group method) 2. Major characters for classifying cultivars were days to flowering, number of leaves, leaf length, stem diameter and width of midrib: the five characters seemed to be useful in monothetic classification. 3. Korean varieties were similar to oriental, and japanese varieties to taiwan. 4. WVGM was more accurate and meaningful than classification by WPGM (weighted paired group method) and reticulate diagram of correlation. 5. Characteristics of each group: Group I closely related to many leaves, late of maturity and broad leaf type, Group II related to medium leaves, late of maturity and narrow leaf type, Croup 19 related to few leaves, early of maturity and medium leaf type respectively.

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New Korean Record of Setarches longimanus (PISCES: Scorpaenidae)

  • Shin, Ui Cheol;Kim, Jin-Koo;Joo, Dong-Soo
    • Fisheries and Aquatic Sciences
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    • 제19권2호
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    • pp.10.1-10.5
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    • 2016
  • Setarches longimanus (Alcock 1894), in the family Scorpaenidae, was collected from Busan and the coastal waters of Jeju Island, Korea, in January and November 2014, respectively. Two specimens are characterized by XI, 10 dorsalfin rays; 19-21 pectoralfin rays; III, 5 anal fin rays; a second preopercular spine much shorter than the first and third; and an interorbital width 11.3 %-11.6 % of the standard length. We also analyzed 587 base pairs of the mitochondrial DNA cytochrome c oxidase subunit I sequences in order to confirm the taxonomic status of the specimen. As a result, the sequences of our specimen almost corresponded to those of Chinese S. longimanus (genetic distance, d = 0.005), but considerably differed from those of S. guentheri (d = 0.120-0.124). We propose the new Korean names "Ma-su-gam-peng-sok" for the genus Setarches, and "Bul-geun-ma-su-gam-peng" for the species S. longimanus.

진화적인 거리 관계를 반영한 계통분석 분류 단위의 3차원 공간 표현 (Three-Dimensional Space Embedding of phylogenetic taxonomic units Preserving Evolutionarv Distance Relationship)

  • 이승희;황경순;이혜리;이건명;이찬희
    • 한국지능시스템학회:학술대회논문집
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    • 한국퍼지및지능시스템학회 2006년도 추계학술대회 학술발표 논문집 제16권 제2호
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    • pp.75-78
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    • 2006
  • 계통발생학적 분석은 바이오인포메틱스에서 분류 단위의 진화적인 관계를 추정하는데 있어서 중요한 문제 중 하나이다. 계통발생학적 분석에서 사용되는 계통수는 분류 단위들 사이의 진화 거리에 대한 정보를 표현하기에는 부족하다. 이 논문은 진화거리 표현을 위해 3차윈 공간으로 분류 단위가 표현되기 위한 방법을 제안하고, 2차원 트리 뷰와 함께 3차원 공간에서 분류 단위들을 시각화하기 위한 도구를 개발하였다.

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A New Record of Porcellio scaber (Isopoda: Oniscidea: Porcellionidae) from South Korea, with Notes on Its Variation

  • Song, Ji-Hun
    • Animal Systematics, Evolution and Diversity
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    • 제36권4호
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    • pp.309-315
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    • 2020
  • The common rough woodlouse Porcellio scaber Latreille, 1804 is newly reported from South Korea with following diagnostic characteristics: the presence of distinct tubercles on body; the strongly developed lateral lobes of head; the presence of notch on tracheal field of pleopod 1 exopod; and distinctly short exopod of uropod. This species is reported to be cosmopolitan, but there were no taxonomic records of it in South Korea. All voucher specimens were collected from humid shaded areas adjacent to the eastern coast of South Korea. Organismal ecology and scanning electron microscope photographs are provided. In addition, the results of CO1 analysis of individuals representing the different color and morphological variations are provided.

DNA Barcoding of Rocinela niponia (Isopoda, Cymothooidea, Aegidae) from South Korea

  • Kim, Sung Hoon;Choi, Hyun Ki;Kim, Jong Guk
    • Animal Systematics, Evolution and Diversity
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    • 제38권2호
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    • pp.108-112
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    • 2022
  • An aegid species, Rocinela niponia Richardson, 1909, is a Far Eastern species known from Korean and Japanese waters. In this study, mitochondrial cytochrome c oxidase subunit I (COI) sequences of R. niponia were determined based on four specimens collected from the subtidal zone of Chujado Island, South Korea. We compared DNA barcoding data of this species with its congeners. As a result, there was no intra-specific genetic distance between the four COI sequences of R. niponia. Inter-specific distances between R. niponia and other five aegid species ranged from 23.8% to 35.6%. Morphological diagnosis and images of R. niponia are also provided as a valuable contribution toward the identification of Rocinela species in further taxonomic and ecological studies.

DNA Barcoding of Two Gonioctena Species (Coleoptera: Chrysomelidae) Described from the Korean Peninsula

  • Cho, Hee-Wook;Kim, Sang Ki
    • Animal Systematics, Evolution and Diversity
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    • 제37권3호
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    • pp.225-228
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    • 2021
  • Eleven Gonioctena species have been recorded in the Korean Peninsula. Most species in the genus have very similar coloration and morphology. The male genitalia is generally used as the only reliable diagnostic character differentiating closely related species, but it is still difficult to identify females to species accurately. Here, we determined the COI barcodes of two Gonioctena species described from Korea and give morphological descriptions. The interspecific genetic divergence (Kimura 2-parameter) among the Gonioctena ranged from 0.073 to 0.138 and averaged 0.108. The pairwise genetic distance between the two Korean species(0.102) is similar to the average interspecific divergence. We predict that these analyses will help to resolve taxonomic issues and find cryptic species.

An Unrecorded Species of the Genus Isobactrus (Acari, Halacaridae) Inhabiting Marine Plastic Debris from Jeju Island, Korea

  • Jimin Lee;Jong Hak Shin;Cheon Young Chang
    • Animal Systematics, Evolution and Diversity
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    • 제39권4호
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    • pp.289-294
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    • 2023
  • We discovered a halacarid mite species, Isobactrus tuberculatus Abé, 1996, inhabiting marine plastic debris on the coast of Jeju Island, Korea. The key characteristics of these Korean specimens were consistent with those in the original description of specimens from Hokkaido, Japan, including the presence of tuberculate membranous cuticles between the anterior and posterior dorsal plates, fusion of the posterior epimeral plates I and II, tibia II with a bipectinate seta, tibiae III and IV each with five setae, and a pair of subgenital setae in females. However, two small morphological differences were noted: the distance between the anterior and posterior dorsal plates was shorter than that in Japanese specimens, and the location of dorsal seta-2 was closer to the anterior dorsal plate in Korean specimens. We herein provide detailed illustrations of I. tuberculatus, based on the Korean specimens, with a brief taxonomic comment on the similarities among allied congeneric species. The genus Isobactrus is first reported in Korea.

A New Species of Antennella (Hydrozoa: Leptothecata: Halopterididae) from Korea

  • Hyo-Jin Yu;Seung-Joon Lee;Sung-Jin Hwang
    • Animal Systematics, Evolution and Diversity
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    • 제40권1호
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    • pp.79-87
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    • 2024
  • A taxonomic examination of hydroids collected from the subtidal zones of Ulleungdo and Dokdo located in the East Sea of Korea from 2017 to 2023 was conducted. Through this study, Antennella aurantia n. sp., a new species belonging to the family Halopterididae, was newly added to the hydrozoan fauna of Korea. This new species is clearly distinguished from similar species by the different morphology and size of the hydrothecae, lateral nematothecae, and gonothecae. By comparing the 16S rRNA sequence with 7 recorded species within the Antennella, the interspecific genetic distance to the new species was 8.2-28.9%, which is very high compared to the intraspecific variation of 0.0%, showing that it was clearly distinguished from other species. As a result of this study, a total of 4 Antennella species are reported in the hydrozoan fauna of Korea.

자두의 형태적 특성과 주성분 분석에 의한 품종군 분류 (Morphological Characteristics and Principal Component Analysis of Plums)

  • 정경호
    • 원예과학기술지
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    • 제17권1호
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    • pp.23-28
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    • 1999
  • Prunus cerasifera, P. domestica 및 P. salicina에서 기원된 자두 53 종 또는 품종으로 부터 27 형태형질의 특성을 조사하여 품종 동정에 필요한 기초자료를 제공하고, 그들간의 분류적 관계를 알아보기 위하여 주성분분석 및 집괴분석을 실시하였다. 조사된 형태형질 중 잎의 크기, 잎의 형태 및 엽내 털 발생정도 등이 자 두아속 식물의 동정 및 분류적 관계 해석에 있어서 상당히 유용하게 이용될 수 있을 것으로 단되었으며, 잎의 길이, 엽병 길이, 밀선수, 형, 엽저, 만개기 등은 P. domestica계 자두와 P. salicina계 자두간에 명확한 차이를 나타내었다. 또한 주성분분석 득점치를 이용한 비가 평균결합법에 의한 집괴분석 결과 53개 분류 군들은 평균거리 1.0을 기준으로 할 때 P. alicina-P. cerasifera 표현군, P. domestica 표현군 및 P. pinosa 표현군 등 3개의 표현군으로 분류될 수 있어, 분류군들의 대략적인 분류적 관계 분석이 가능하였다. 그러나 정확한 종군 분류를 위해서는 보다 많은 형태형질의 용이 필요할 것으로 판단되었다.

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RAPD분석에 의한 미선나무속의 분류학적 연구 (A taxonomic study of Abeliophyllum Nakai (O1eaceae) based on RAPD analysis)

  • 김동갑;박경량;김주환
    • 한국자원식물학회지
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    • 제15권1호
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    • pp.26-35
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    • 2002
  • 물푸레나무과의 미선나무는 한국고유속 단일종으로 열매의 형태와 꽃의 색 등과 같은 외부형태학적 특징에 의해 근연속인 개나리속과 구별된다. 미선나무는 꽃의 색과 시과의 형태에 따라 여러개의 종내분류군들이 보고되어 있지만, 이들의 분류학적정체성과 계급의 설정 등에 관하여는 학자들간에 많은 논란이 있다. 본 연구에서는 RAPD 분석을 실시하여 이를 토대로 미선나무의 종내분류군들의 한계를 규명하고 집단간의 유전적 다형현상과 유연관계를 논의 하고자 하였다. 16개의 random primer를 이용한 효소중합반응을 실시하여, 70개의 공통적인 band를 포함하여 212개의 표식인자가 관찰되었고, 그 결과는 Nei의 유전적거리를 이용하여 분석하였다. 분류군간에는 0.108에서 0.321의 유전적 변이가 관찰되었고, UPGMA에 의한 군집분석을 통하여 동일분류군보다는 몇몇 지역집단간에 유집군이 형성되었으며, 종내분류군간에 는 뚜렷한 연속성이 관찰되지 않았다. RAPD분석 결과는 미선나무의 종내분류군들은 개체변이이고 이를 동일종으로 처리되어야 한다는 의견을 지지하고 있다. 또한, RAPD분석은 미선나무 집단이 다양한 유전적 다형성을 지닌 높은 유전자 푸울을 유지하고 있다는 것을 확인하는데 매우 유용하였다.