• 제목/요약/키워드: strA-strB

검색결과 43건 처리시간 0.026초

Phylogenetic Relationships among Some Bumblebees (Hymenoptera: Apidae) Common in Korea Inferred from Mitochondrial 16S rRNA Sequences

  • Yoon, Hyung-Joo;Lee, Myeong-Lyeol;Kim, Sam-Eun;Lee, Sang-Beom;Kim, Iksoo;Bae, Jin-Sik;Jin, Byung-Rae;Sohn, Hung-Dae
    • International Journal of Industrial Entomology and Biomaterials
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    • 제8권1호
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    • pp.51-59
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    • 2004
  • Phylogenetic relationships were analyzed among bumblebees using a portion of mitochondrial (mt) 16S ribosomal RNA (16S rRNA). Eight species of true bumblebees and one species of cuckoo bumblebee (Bombini, Apidae), collected from Korea were included in the analysis. Also, one species of true bumblebee imported from several foreign countries for pollination was included. The length of mt 16S rRNA sequence ranged from 496 bp to 508 bp and sequence divergence ranged from 1.4% (7 bp) to 15.49% (77bp). As expected, a high A+T content was observed (78.5% on average). According to the phylogeny tree derived from parsimony and maximum likelihood analysis, a monphyletic Bombus species, excluding a single cuckoo bumblebee, Psithyrus coreanus, was obtained, but the bootstrap estimate at the node supporting the monophyletic group was very weak (40% or 46%), suggesting a very close relationship of the cuckoo bumblebee to the true bumblebee. Within Bombus species belonging to identical subgenera subgeneric specific clustering was formed with high bootstrap values, implying validity of the subgeneric names of each species: Pyrobombus for B. ardens and B. modeatus; Megabombus for B. consobrinus wittenburgi and B. koreanus; and Bombus s. str. for B. ignitus, B. hypocrita sapporoensis, and B. terrestris.

Bradyrhizobium japonicum에 외부유전자(外部遺傳子)의 도입(導入)과 대두(大豆)에 대한 접종효과 (Transfer of foreign Genes into the Bradyrhizobium japonicum and their Inoculation Effects on Soybean Plants)

  • 김용웅;김길용;이영환;김광식
    • 한국토양비료학회지
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    • 제25권4호
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    • pp.387-393
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    • 1992
  • 접종근류균(接種根瘤菌)의 소장(消長)을 유전공학적(遺傳工學的)으로 조제(調劑)한 Bradyrhizobium japonicum RJB6 $str^rnal^rneo^r$을 이용(利用)하여 연구(硏究)하였다. 전남(全南)일대로 부터 분리(分離) 동정한 균(菌)에 먼저 streptomycin과 nalidixic acid에 저항성(抵抗性)을 갖는 spontaneous mutant를 유도하고 이어 pSUP2021를 함유(含有)하고 있는 E. coli와 conjugation하여 neomycin 저항성(抵抗性) gene(Tn5)을 도입(導入)하였다. Southern hybridization한 결과(結果) 4.9kb상에서 Tn5를 확인(確認)했다. 서로 다른 균밀도(菌密度)로 파종(播種)한 40일후, 크로로필을 제외한 근류수(根瘤數), 근류신선중(根瘤新鮮重), 간장 및 질소함량이 low cell suspension 처리구보다 heavy cell suspension 처리구에서 약간 높았다. 표식균주(標識菌株)의 회수율(回收率)은 heavy cell suspension 처리구에서 12%인 반면, low cell suspension 처리구에서는 5%에 지나지 않았다.

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탐라오가피의 Eleutheroside B, E 및 β-Glucan 함량 분석 및 분석법 검증 (Method Validation for the Determination of Eleutherosides and β-Glucan in Acanthopanax koreanum)

  • 김영현;배다빈;박선옥;이상종;조옥현;이옥환
    • 한국식품영양과학회지
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    • 제42권9호
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    • pp.1419-1425
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    • 2013
  • 탐라오가피를 이용하여 건강기능식품 개발 시 원료의 표준화를 위한 eleutheroside B, E 및 ${\beta}$-glucan의 함량 및 분석법 검증을 실시하였다. 분석법 검증결과, HPLC를 이용한 분석방법에서 표준용액의 피크유지시간과 탐라오가피 뿌리 및 줄기 추출물의 피크유지시간이 일치하였으며 동일한 spectrum을 나타내는 것으로 특이성을 확인하였다. Eleutheroside B와 E의 검량선은 각각 0.9997, 0.9999로 1에 가까운 높은 직선성을 보여주어 분석에 적합함을 알 수 있었다. Eleutheroside B와 E의 검출한계는 각각 $0.050{\mu}g/mL$, $0.025{\mu}g/mL$이었고 정량한계는 $0.250{\mu}g/mL$로 eleutheroside B와 E가 동일한 값으로 설정되었다. Eleutheroside B의 함량은 탐라오가피 뿌리 및 줄기에서 각각 $525.7{\pm}16.8$, $525.1{\pm}21.1{\mu}g/g$으로 큰 차이가 없었으며 eleutheroside E의 함량은 뿌리 및 줄기에서 각각 $1,315.3{\pm}22.7$, $1,037.5{\pm}22.2{\mu}g/g$으로 뿌리에 더 많은 eleutheroside E가 함유되어 있었다. 정밀도(RSD) 측정 결과, eleutheroside B와 E는 일간 정밀도에서 각각 1.4~5.0, 1.1~2.5%의 정밀도를 보여주었으며 일내 정밀도에서는 각각 2.8~2.9, 0.4~1.1%로 일간 정밀도보다 높은 정밀성을 나타내었다. 또한 eleutheroside B는 100.66~110.04%, eleutheroside E는 94.26~111.62% 범위의 회수율을 보여주어 실험방법에 대한 정확성을 검증하였다. ${\beta}$-Glucan 분석법 검증 결과, 100.03%의 회수율을 보였으며 분석오차는 2.33%로 높은 정확도를 보여주었고, 일간(inter-day) 정밀도는 1.32~5.67%이었으며 일내(intra-day) 정밀도는 8.01~11.76%의 정밀성을 나타내었다. 탐라오가피 줄기, 잎 및 열매의 ${\beta}$-glucan 함량은 각각 $5.32{\pm}0.38$, $4.34{\pm}0.32$, $3.71{\pm}0.22%$(w/w)로 줄기에 가장 많은 ${\beta}$-glucan이 함유되어 있는 것으로 확인되었다. 본 연구 결과, 지표성분인 eleutheroside B와 E의 HPLC를 이용한 동시분석 방법과 ${\beta}$-glucan 분석방법이 적합한 분석방법임이 검증되었다.

경북지역 환돈 유래 Salmonella Typhimurium의 약제내성 유전자 분석 (Analysis of the antibiotic resistance gene in Salmonella Typhimurium isolates from diseased pigs in Gyeongbuk province)

  • 김주형;김성국;김선수;김정화;박세희;남기후;김형배
    • 한국동물위생학회지
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    • 제36권2호
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    • pp.73-78
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    • 2013
  • This study was conducted to investigate antibiotic resistance among Salmonella Typhimurium isolates from diseased pigs in Gyeongbuk province during the period 1998~2011. One hundred forty one isolates were tested for antibiotic resistance using the standard disk diffusion method and were examined for presence of resistance gene by PCR method. S. Typhimurium showed high drug resistance rates to tetracycline (95.7%), streptomycin (93.6%), ampicillin (86.5%), cephalothin (80.1%), gentamicin (79.4%), and trimethoprim/sulfamethoxazole (72.3%). Resistance gene, blaTEM, blaPSE1, tetA, tetB, tetG, sul1, sul2, aadA, strA, grm, and temA were detected among the antibiotic resistance isolates and temB, tetC, aadB gene were not detected. One hundred twenty one (89.6%) tetA, two (1.5%) tetB and one (0.7%) tetG gene were detected in the 135 tetracycline resistant isolates. Two (1.6%) temA gene were detected in one hundred twenty two ampicillin resistance isolates and temB was not detected.

Complete mitochondrial genome of Rotunda rotundapex Miyata & Kishida 1990 (Lepidoptera: Bombycidae), which was named as Bombyx shini Park & Sohn 2002

  • Park, Jeong Sun;Kim, Min Jee;Kim, Iksoo
    • International Journal of Industrial Entomology and Biomaterials
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    • 제44권2호
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    • pp.55-64
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    • 2022
  • Bombyx shini Park & Sohn, 2002 (Lepidoptera: Bombycidae), which was listed as an endemic species in South Korea has recently been renamed as the East Asian silk moth Rotunda rotundapex Miyata & Kishida, 1990 (Lepidoptera: Bombycidae). In this study, we sequenced the complete mitochondrial genome (mitogenome) of the R. rotundapex to announce genomic characteristics and to clarify its validity with a new name. The 15,294-bp long complete mitogenome comprises a typical set of genes [13 protein-coding genes (PCGs), 2 rRNA genes, and 22 tRNA genes] and one major noncoding, A + T-rich region, with an arrangement identical to that observed in most lepidopteran mitogenomes. The A/T content of the whole mitogenome was 79.22%; however, it varied among the regions/genes as follows: A + T-rich region, 91.62%; srRNA, 84.67%; lrRNA, 83.01%; tRNAs, 81.43%; and PCGs, 77.46%. Phylogenetic analyses of 35 species in the Bombycoidea superfamily showed the sister relationship between the families Sphingidae and Bombycidae s. str., with the higher nodal support [bootstrap support (BS) = 78%]. The Saturniidae was placed as the sister to the two families, but the nodal support for this relationship was low (BS = 53%). Current R. rotundapex was placed together with previously reported con-species with the highest nodal support, forming a separate clade from Bombyx, validating that B. shini can have a new genus name, Rotunda. However, the Korean R. rotundapex showed a substantial sequence divergence at 5.28% to that originated from an individual of type locality Taiwan in 1,459-bp of COI sequences. Considering such a high sequence divergence an additional study, which includes morphological and DNA barcoding data from further extensive distributional range maybe is needed for further robust taxonomic conclusion.

뇨 돌연변이 유발성 시험법 정립 (Optimization of bacterial urinary mutagenicity test)

  • 장미;신한재;박철훈;손형옥;현학철
    • 한국연초학회지
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    • 제37권1호
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    • pp.18-24
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    • 2015
  • Urinary mutagenicity is widely recognized as a useful biomarker for the assessment of mutagen exposure level in human. In this study, we optimized the several parameters affecting the activity of Urinary mutagenicity using highly sensitive mutation test(microsuspension assay) instead of the conventional Ames test. First of all, we chose YG1024 as a highly sensitive strain from three str ains of Salmonella typhimurium(TA98, TA100, YG1024) using r epr esentative mutation substances, such as Benzo[a]pyrene, 2-Aminonaphthalene, 2-amino-3-methyl-9H-pyrido[2,3-b]indole($MeA{\alpha}C$) and cigarette total particulate matter(TPM). And we established the several kinds of test conditions such as number of bacter ia, concentr ation of metabolic activation system and incubation time for the most sensitive reaction. Also, we optimized efficient pre-treatment method using commercial C18 column. As a r esults, this method was shown a aver age of 94 % recovery value and 13 % relative standard deviation. When we compared the Urinary mutagenicity between several participants, we confirmed that compar ative measurements were possible for different levels of urine mutagenicity. In conclusion, the optimized highly sensitive mutation test to measure the Urinary mutagenicity may be useful in biological monitoring of mutagen exposure level.

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Characterization of Drug-Resistant Salmonella enterica Serotype Typhimurium by Antibiograms, Plasmids, Integrons, Resistance Genes, and PFGE

  • Benacer, Douadi;Thong, Kwai Lin;Watanabe, Haruo;Puthucheary, Savithri Devi
    • Journal of Microbiology and Biotechnology
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    • 제20권6호
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    • pp.1042-1052
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    • 2010
  • Forty-seven Salmonella Typhimurium (33 zoonotic, 14 clinical) strains were tested for antimicrobial resistance using the standard disk diffusion method. The presence of relevant resistance genes and class 1 integrons were investigated by using PCR. Pulsed-field gel electrophoresis (PFGE) and plasmid profiling were carried out to determine the genomic diversity of Salmonella Typhimurium. Approximately 57.4% of the S. Typhimurium strains were multidrug resistant (MDR) and showed high resistance rates to tetracycline (70.2%), sulfonamides (57.4%), streptomycin (53.1%), ampicillin (29.7%), nalidixic acid (27.6%), kanamycin (23.4%), chloramphenicol (21.2%), and trimethoprim (19.1%). Resistance towards cephalosporins was noted for cephalothin (27.6%), cephradine (21.2%), amoxicillin clavulanic acid (17.0%), and cephalexin (17.0%). Resistance genes, $bla_{TEM}$, strA, aadA, sul1, sul2, tetA, tetB, and tetC, were detected among the drug-resistant strains. Thirtythree strains (70.2%) carried class 1 integrons, which were grouped in 9 different profiles. DNA sequencing identified sat, aadA, pse-1, and dfrA genes in variable regions on class 1 integrons. Thirty-five strains (74.4%) were subtyped to 22 different plasmid profiles, each with 1-6 plasmids (2.0 to 95 kb). PFGE subtyped the 47 strains into 39 profiles. In conclusion, high rates of multidrug resistance were found among the Malaysian Salmonella Typhimurium strains. The emergence of multidrug-resistant Salmonella Typhimurium to cephalosporin antibiotics was also observed. The strains were very diverse and no persistent clone was observed. The emergence of MDR Salmonella Typhimurium is a worldwide problem, and this report provides information for the better understanding of the prevalence and epidemiology of MDR S. Typhimurium in Malaysia.

SPECTROSCOPIC OBSERVATION OF THE SOLAR ACTIVE REGIONS IN HeI 10830 ${\AA}$ LINE

  • TOHMURA ICHIROH;KITAI REIZABURO;SUEMATSU YOSHINORI;SOLTAU DIRK
    • 천문학회지
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    • 제29권spc1호
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    • pp.333-335
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    • 1996
  • Here we report the results from spectroscopic observations of soloar active regions in the HeI 10830 ${\AA}$ line at the German Vacuum Tower Telescope(VTT) in Tenerife during the August 199:3 International EFR(Emerging Flux Region) Campaign. Four active regions in various stages of their evolution, i.e., NOAA7558, 7560, 7561, and 7562, were ovserved on 10 August 1993. From the observed HeI 10830 ${\AA}$ spectra in these active regions, spectroscopic quantities such as equivalent width(EW), doppler shift, doppler width, etc., were derived(see Figure l(a)) and the correlation between them were studied(see Figure l(b)). Our main results are as follows: (I)In NOAA7562, which is a young and evolving EFR, the EW is large, while it is small around a simple and roundish spot of NOAA7558. (2)In these active regions, redshift in the 10830 line is dominant when the EW is larger. (3)As the doppler width increases, the line tends to shift redward. (4)When the EW is smaller, it seems to exist another component which have dynamic characteristics different from the redshifting component. In NOAA7560 and NOAA7561, regions which have several small spots, the values of the EW are intermediate. Results (2) and (3) may suggest the possible existence of downflow above active regions, if the HeI 10830 ${\AA}$line is formed in the upper chromopshere, and it is consistent with the earlyer result from the SMM extreme-ultraviolet observation by Klimchuk(1987, Astrophys. J., 323, 368) (to be submitted. to Astronomy and Astrophysics; an extended abstract)

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Fertilization Promoting Peptide가 사람 정자의 운동양태, 수정능력획득 및 첨체반응에 미치는 영향 (Effect of Fertilization Promoting Peptide on Kinematic Parameters, Capacitation and Acrosome Reaction in Human Spermatozoa)

  • 강희규;김묘경;김동훈;한성원;최도연;이호준;김문규
    • Clinical and Experimental Reproductive Medicine
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    • 제27권2호
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    • pp.201-209
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    • 2000
  • Objective: This study has been carried out to evaluation the effect of fertilization promoting peptide (FPP) on the kinematic parameters, capacitation and acrosome reaction of the frozen-thawed human spermatozoa. Methods: After FPP treatment, we examined kinematic parameters, capacitation and acrosome reaction, using the methods of computer-aided sperm analysis (CASA) and chlortetracycline (CTC) fluorescence analysis. Results: We have obtained the evidence that FPP can promote the capacitation and inhibit the spontaneous acrosome reaction of frozen-thawed human spermatozoa in vitro. FPP ($25{\sim}100$ nM) induced a significant increase in the proportion of B-pattem capacitated spermatozoa, and a significant decrease in the proportion of F-pattem uncapacitated ones without significant stimulation of acrosomal exocytosis. In the kinematic parameters treatment, FPP treated groups maint3ined higher LIN, BCF and STR than those of control. The VAP, VSL, VCL and ALH were not different. Therefore it is suggested that FPP in human seminal plasma may play a positive role in promoting human sperm function.

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타정 압력에 의한 세균포자의 파괴현상 (The Destruction of Bacterial Spores Upon Compressional Pressure)

  • 이철호;김영만;이정치;정필근
    • 한국식품과학회지
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    • 제12권4호
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    • pp.272-277
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    • 1980
  • 본 연구는 유용 세균의 포자를 정제화(tabletting)하는 과정에서 포자의 내구성 특히 타정 압력에 대한 세균 포자의 파괴율을 규명하려 하였다. Bacillus coagulans, Bacillus subtilis 및 Clostridium butyricum의 세가지 포자 형성균의 포자와 포자를 형성하지 않는 세균인 Streptococcus faecalis의 영양세포에 대하여 시험하였다. 정제제조 과정에서 포자의 파괴는 주로 타정과정에서 일어나며 세균의 포자는 타정압력에 대하여 대수적 파괴율을 나타내었다. 세균포자의 압력에 의한 파괴율은 세균의 종류에 따라 달라지며 이것을 정량적으로 나타내기 위하여 Decimal Reduction Pressure라는 개념을 도입하여 P-value라 칭하고 각 세균 포자의 P-value를 구하였든 바 B. subtilis의 포자는 $2.9\;ton/cm^2$, B. coagulans의 포자는 $2.6\;ton/cm^2$, Cl. butyricum의 포자는 $2.1\;ton/cm^2$의 값을 각각 나타내었다. 반면, Str. faecalis의 영양세포는 $1.7\;ton/cm^2$의 낮은 값을 나타내었다. 세균포자의 파괴율은 사용하는 부형제에 따라 영향을 받았으며 동일한 B. coagulans의 포자라도 lactose filler에서는 그 P-value가 $2.8\;ton/cm^2$이었으며 starch filler에서는 $2.0\;ton/cm^2$이었다. 동일한 부형제를 사용하였을 때 생존 포자수는 정제의 경도와 밀도에 역비례하였다. 그러나 경도와 밀도가 낮은 starch filler에서는 lactose filler에 비교하여 더 높은 포자 파괴율을 보였다. 결론적으로 부형제의 종류는 정제 형성뿐만 아니라 세균 포자의 생존에도 중요한 요인이며, 물리적 성질이 서로 다른 부형제를 알맞게 혼합함으로서 타정시 유용세균포자의 생존율을 크게 향상시킬 수 있다.

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