• Title/Summary/Keyword: species collection

Search Result 562, Processing Time 0.067 seconds

Contribution to the Checklist of Soil-inhabiting Fungi in Korea

  • Lee, Seon-Ju;Hong, Seung-Beom;Kim, Chang-Yung
    • Mycobiology
    • /
    • v.31 no.1
    • /
    • pp.9-18
    • /
    • 2003
  • A total of 82 genera and 271 species of soil-inhabiting fungi including saprobic, nematode-trapping, and arbuscular mycorrhizal but plant pathogenic fungi published hitherto in South Korea are listed with the information on geographic location, habitat, vegetation when available, and relevant literatures.

Monitoring for prevalence of mosquitoes collected and pathogen infection (세종지역 질병매개모기 분포 및 병원체 감염 실태 조사)

  • Rhee, Seong-Hee;Kim, Tae-Pyeong;Lee, Tae-Ho;Kim, Mun-Bae;Yoon, Chang-Hee
    • Korean Journal of Veterinary Service
    • /
    • v.41 no.3
    • /
    • pp.165-169
    • /
    • 2018
  • This survey is performed for the vector mosquitoes including of Japanese encephalitis, Malaria and West niles virus. Black light traps were installed in 5 sites (Sejong lake, Janggun-myeon, Jeonui-myeon, Yeongi-myeon, Bukang-myeon). Mosquitoes were collected twice every week from five collection sites using a black light trap from May to September. A total of 10 species belonging to 4 genera, 14,234 female mosquitoes were collected and identified as vector mosquitoes. Among ten mosquito species, Culex pipiens complex was the most commonly mosquitoes (6,163 individuals, 43.3%). The greatest number of Culex pipiens pallens was trapped in the first week of July. A total of 115 pools from 14,234 mosquitoes were prepared according to their species, collection date and site. We have screened infection of virus in mosquitoes. All of virus were not detected in mosquitoes. Our findings confirm that population and first appearance time of vectors mosquitoes and virus infection in Sejong city.

Development of Species-specific PCR Primers for Detecting Peptoniphilus mikwangii

  • Park, Soon-Nang;Lee, Junhyeok;Kook, Joong-Ki
    • International Journal of Oral Biology
    • /
    • v.42 no.3
    • /
    • pp.143-147
    • /
    • 2017
  • In a previous study, Peptoniphilus mikwangii was isolated from the human oral cavity as a new species. The purpose of this study was to develop P. mikwangii-specific PCR primers. The PCR primers were designed, based on the nucleotide sequence of 16S ribosomal RNA (16S rDNA). The specificity of the primers was tested using genomic DNAs of 3 strains of P. mikwangii and 27 strains (27 species) of non-P. mikwangii bacteria. The sensitivity of primers sensitivity was determined using PCR, with serial dilutions of the purified genomic DNAs (4 ng to 4 fg) of P. mikwangii KCOM $1628^T$. The data showed that P. mikwangii-specific qPCR primers (B134-F11/B134-R1 & B134-F5/B134-R5) could detect only P. mikwangii strains, and 400 fg or 40 fg of P. mikwangii genome DNA. These results suggest that PCR primers are useful in detecting P. mikwangii from the oral cavity.

A Checklist of Decay Fungi Associated with Oak Trees in Korea (한국산 참나무 목재부후균의 조사목록)

  • Lee, Jin-Sung;Jung, Hack-Sung;Lim, Young-Woon
    • The Korean Journal of Mycology
    • /
    • v.36 no.2
    • /
    • pp.101-115
    • /
    • 2008
  • Six species of oak are commonly found in Korean forests growing together with evergreen pines. Korean oak forests have recently been attacked by ambrosial fungi of the genus Raffaelea and by many other fungal species that are vectored by the beetle Platypus koryoensis. We investigated a full list of the diverse decay fungi as a first step to better understand the association between these fungi and oak trees, as well as considering effective management methods for oak forests in Korea. Through examination of specimens deposited in the Seoul National University Fungus Collection (SFC) and the National Institute of Biological Resources (NIBR), 523 decay fungi (104 species) associated with oak trees were identified and a full list is provided.

The Decomposition of Leaf Litters of Some Tree Species in Temperate Deciduous Forest in Korea I. Losses in Dry Weight of Leaf Litter

  • Yang, Keum-Chul;Shim, Jae-Kuk
    • The Korean Journal of Ecology
    • /
    • v.26 no.4
    • /
    • pp.203-208
    • /
    • 2003
  • Losses in the dry weight of leaf litter from six tree species were studied during 16 months on the forest floor in temperate deciduous forest of Mt. Cheonma in the vicinity of Seoul in Korea by using litter bag method. The decomposition rate of each leaf litter varies with each species. After 16 months elapsed, the leaf litter of Acer pseudo-sieboidianum showed the highest decomposition constant (0.82) as Olson´s decomposition constant, while that of Pinus densiflora showed the lowest decomposition constant (0.33). The decomposition constant of Quercus mongolica, Q. serrata, Betula ermani and Carpinus laxiflora showed 0.43, 0.37, 0.66 and 0.75, respectively. The decomposition constant of leaf litter was considered with temperature and precipitation which accumulated daily during each term of litter bag collection. The decomposition constant of leaf litter showed closely positive correlation with daily accumulative temperature and precipitation. The relationships between decomposition constant and the daily accumulative temperature and precipitation at each period of litter bag collection were analyzed through multi-regression analysis. The correlation coefficients as a result of multi-regression analysis in Q. mongolica, Q. serrata, P densiflora, B. ermani, C. laxiflorais and A. pseudo-sieboldianum were 0.83, 0.81, 0.69, 0.77, 0.77 and 0.62, respectively. The precipitation showed higher effect, about 10 times, on the leaf litter decomposition than the daily accumulative temperature.

Seed collection strategies for plant restoration with the aid of neutral genetic diversity

  • CHUNG, Mi Yoon;SON, Sungwon;MAO, Kangshan;LOPEZ-PUJOL, Jordi;CHUNG, Myong Gi
    • Korean Journal of Plant Taxonomy
    • /
    • v.49 no.4
    • /
    • pp.275-281
    • /
    • 2019
  • One key step in the plant restoration process is the collection of seeds from the field. For the selection of source populations of target plant species for translocation purposes (reintroduction or reinforcements), several approaches are possible. A practical method involves the use of data from reciprocal transplant studies. If no direct data are available, knowledge of population genetics and the phylogeography of the target species can serve as an alternative. In this short review, we briefly propose guidelines for those collecting seeds for plant species restoration based on population genetics theory, focusing on two main questions: Where does the plant material come from and how are sources designated, and how are seeds efficiently collected from local populations? While genetic data on a larger scale (phylogeography and population genetics) are needed to form a reply to the first question, similar data on a smaller scale (fine-scale genetic structures within populations) are necessary to shed light on the second issue.

Aspergillus Associated with Meju, a Fermented Soybean Starting Material for Traditional Soy Sauce and Soybean Paste in Korea

  • Hong, Seung-Beom;Kim, Dae-Ho;Samson, Robert A.
    • Mycobiology
    • /
    • v.43 no.3
    • /
    • pp.218-224
    • /
    • 2015
  • Aspergillus is an important fungal genus used for the fermentation of Asian foods; this genus is referred to as koji mold in Japan and China. A. oryzae, A. sojae, and A. tamari are used in the production of miso and shoyu in Japan, but a comprehensive taxonomic study of Aspergillus isolated from Meju, a fermented soybean starting material for traditional soy sauce and soybean paste in Korea, has not been conducted. In this study, various Aspergillus species were isolated during a study of the mycobiota of Meju, and the aspergilli were identified based on phenotypic characteristics and sequencing of the ${\beta}$-tubulin gene. Most strains of Aspergillus were found to belong to the following sections: Aspergillus (n = 220), Flavi (n = 213), and Nigri (n = 54). The most commonly identified species were A. oryzae (n = 183), A. pseudoglaucus (Eurotium repens) (n = 81), A. chevalieri (E. chevalieri) (n = 62), A. montevidensis (E. amstelodami) (n = 34), A. niger (n = 21), A. tamari (n = 15), A. ruber (E. rubrum) (n = 15), A. proliferans (n = 14), and A. luchuensis (n = 14); 25 species were identified from 533 Aspergillus strains. Aspergillus strains were mainly found during the high temperature fermentation period in the later steps of Meju fermentation.

A Checklist of the Families Lonchaeidae, Pallopteridae, Platystomatidae, and Ulidiidae (Insecta: Diptera: Tephritoidea) in Korea with Notes on 12 Species New to Korea

  • Han, Ho-Yeon
    • Animal Systematics, Evolution and Diversity
    • /
    • v.29 no.1
    • /
    • pp.56-69
    • /
    • 2013
  • A preliminary list of the following four tephritoid families is provided including 30 Korean species, of which 12 are new to Korea: two Lonchaeidae, three Pallopteridae (two new to Korea), 17 Platystomatidae (two new to Korea), and eight Ulidiidae (all new to Korea). This list is mainly based on the insect collection at the Yonsei University Wonju Campus and on previous publications concerning these taxa. Although a full taxonomic revision for each family is required in the long term, this preliminary list will provide a useful starting point to further investigation of these families. For the other three tephritoid families known in Korea but not treated in the present study, 89 species of Tephritidae, 14 species of Pyrgotidae, and one species of the rare family Ctenostylidae have been reported previously. A total of 134 species in seven families are officially recognized for the Korean fauna of the superfamily Tephritoidea.

Local Knowledge on Trees Utilization and Their Existing Threats in Rashad District of Nuba Mountains, Sudan

  • Adam, Yahia Omar
    • Journal of Forest and Environmental Science
    • /
    • v.30 no.4
    • /
    • pp.342-350
    • /
    • 2014
  • Rural people of Sudan are endowed with a deep knowledge concerning the utilization of different tree species. However research on the local knowledge related to tree species utilization still lacks adequate attention. The study objectives were to identify the existing local knowledge related to the utilization of the tree species and the existing threats to the availability of the trees. A total of 300 respondents were selected randomly from Rashad district in Nuba Mountains in 2011. Semi-structured interview, direct observation, group discussion, preference ranking and direct matrix ranking were used to collect the data. The study results revealed that people of Nuba Mountains utilize different tree species for food, medicinal purposes, fodder, firewood, construction and cultural ceremonies. The study results also indicated that the availability of trees is negatively influenced by firewood collection, agricultural expansion, drought, overgrazing and charcoal production. The study concluded that local knowledge has crucial role in tree species utilization in Nuba Mountains. Further researches to document and substantiate the local knowledge on useful tree species are highly recommended.

Chytrid Distribution in Diverse Boreal Manitoba Sites

  • Lee, Eun-Ju
    • Animal cells and systems
    • /
    • v.4 no.1
    • /
    • pp.57-62
    • /
    • 2000
  • Soil samples were collected in thirteen Manitoba boreal forest sites. Spatial distribution of chytrids from diverse boreal forest microhabitats was investigated by baiting with jack pine pollen. After baiting, the pollen was surveyed for chytrids for 8 ten day period and individual species were counted. Total infestations of pollen by chytrids ranged from 5.8% to 90.2% from various soils. Each site with high infestation was characterized by litter with high needle content while mineral soil or soil with limited organic matter yielded low levels of pollen infestation. Species diversity tended to be higher in soils with higher pollen infestation and lower in soils with lower pollen infestation. Lower diversity was generally observed in mineral soils or soils with a limited organic horizon comprised, in part, of broad leaf litter. Based on coefficients of association and species in common among species across the collection sites, it was possible to relate dominant species assemblages in site groups. These species assemblages in the site groups suggest that the chytrids are distributed by litter and soil types. It can be concluded that the substratum characteristics of litter types and availability of litter may be important in describing chytrid distribution in boreal forest sites.

  • PDF