• Animal cells and systems
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• v.3 no.3
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• pp.285-293
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• 1999

Allele frequencies in twenty-two populations from nine Korean muricid species of five genera (Rapaninae and Ocenebrinae) wire analyzed genetically using 13 loci from 11 allozyme systems. The clustering patterns of these species were basically consistent with traditional groupings to two subfamilial categories based on shell and radula morphologies. Within six ocenebrine species it was apparent that Ceratostoma inornata and Pteropurpura adunca were most closely related to each other than to any other species belonging to the genus Ceratostoma. These results, along with other anatomical features 〔morphologies of albumin gland (female), egg capsule〕, suggest that the generic position of C. inornata, previously classified to be congeneric with other western Pacific Ceratostoma species, should be reconsidered. Our results show the close relationship of Nucella freycineti with other ocenebrine species, rather than with rapanines, which supports a previous suggestion that the genus Nucella should be placed with the subfamily Ocenebrinae rather than the subfamily Rapaninae.

• Animal cells and systems
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• v.2 no.4
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• pp.435-438
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• 1998

In the present study, we have examined the crossability of four species in the A. jaluense complex to provide additional information on their delimitation and levels of differentiation. Crosses between diploid A. chiisanense and the tetraploid species including A. jaluense s. str., A. triphyllum, and A. pseudoproliferum yielded no fruit- or seed-set, indicating that the former species is reproductively completely isolated from the latter three species. In interspecific crosses between the tetraploid species, combinations involving A. jaluense s. str. resulted in much reduced fruit- and seed-set, indicating that A. jaluense s. str. is more or less reproductively isolated from the other tetraploid species. However, crossing data revealed the absence of reproductive isolation between A. triphyllum and A. pseudoproliferum These results strongly support the relationships that have been previously suggested for the A. jaluense complex on the basis of morphology, chromosome number, and flavonoid chemistry.

• Animal Systematics, Evolution and Diversity
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• v.25 no.3
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• pp.295-300
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• 2009

We describe three new species of the Genus Kleidotoma (Figitidae: Eucoilinae) from Korea. They are K. convexitas n. sp., K. debilifovea n. sp. and K. longirudis n. sp. A key to all Korean Kleidotoma species including three new species herein are given. Descriptions and illustrations of diagnostic characters of three new species are also provided.

• ALGAE
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• v.35 no.3
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• pp.213-224
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• 2020

The freshwater red algal genus Sheathia contains species with heterocortication (both bulbous and cylindrical cells covering the main axis) and homocortication (only cylindrical cells). When the genus was proposed, the species with heterocortication were revised, but all specimens with homocortication were assigned to Sheathia arcuata with the caveat that it may represent a species complex. Recent studies have described new species with homocortication and S. arcuata has been rendered paraphyletic. In the current study, new sequences of the rbcL and 5′ region of the cytochrome c oxidase subunit I markers were combined with previously published data to construct a robust phylogeny and circumscribe new species. Four new species, S. abscondita, S. californica, S. plantuloides, and S. transpacifica are proposed. Examination of morphological characters among homocorticate species show no diagnostic characters to distinguish among species, whereas S. plantuloides is only known from sporophytes (chantransia) so it lacks the typical morphological characters derived from the gametophytes for comparison. Although DNA sequence data would be needed to make a positive species identification, geography could be employed to narrow the identification to one or two species. The genus is geographically widespread having been recorded from oceanic islands and five continents, whereas the individual species typically occur on a single continent. With this study, the number of species recognized in Sheathia is raised to 17; seven heterocorticate and 10 homocorticate, making this genus one of the most species rich in the Batrachospermales. As well, the resulting phylogeny provides insights into the evolution of heterocortication in Sheathia.

• Korean Journal of Ecology and Environment
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• v.43 no.4
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• pp.503-512
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• 2010

This study was conducted to evaluate fish fauna, species composition, and various guilds against stream orders along with analysis of fish community structure and diversity in Geum River watershed from 2005 to 2007. The total number of fish collected was 4,216 representing 12 families with 56 species. Zacco platypus was the most abundant fish species with 26% in relative abundance (RA). Korean endemic species were 24 species including Zacco koreanus, Microphysogobio yaluensis, Gobiobotia nakdongensis, and Iksookimia koreensis, etc. We also collected endangered fish species such as G. nakdongensis, Liobagrus obesus, and Pseudopungtungia nigra, etc., and their new distribution sites were found in the survey, providing some sites of the fish conservation and protection. Fish tolerance and trophic guilds analysis showed that the proportion of sensitive species, intermediate species, and tolerant species were 33.4%, 29.3%, and 37.3%, respectively and omnivores and insectivores were 48.1 % and 38.4%, respectively. Analysis of site-base study indicated that tolerant species and omnivore species were high in some polluted tributary streams (i.e., Gap and Miho stream) and sensitive and insectivore species were low. In the functional relations, expressed as simple linear regression equations, of stream order on fish metric attributes, showed that the number of species and the number of individuals increased as the stream order increases. This phenomenon was explained by greater availability of stable water volume, rich food, and higher physical habitat capacity. Such guild compositions and stream order characteristics of the river influenced the community structures, based on species diversity, dominance and evenness index in the study. This study may be used as important data in the future for comparisons of fish fauna and compositions before and after two weir (dam) constructions in the middle of Geum River by the government.

• ALGAE
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• v.27 no.4
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• pp.259-268
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• 2012

The genus Pterosiphonia is composed of 22 species worldwide and four of these species have been reported in the North-East Asia. In Korea, P. pennata originally described from the Mediterranean Sea has been previously recorded from the southern coast as a widespread species. In order to confirm the same species from Korea and Mediterranean, we observed the morphology of Korean Pterosiphonia specimen and analyzed rbcL sequences for inferring phylogenetic relationships among similar congeners. Korean entity was recognized as a new species, Pterosiphonia arenosa sp. nov. The new species is characterized by ecorticate axes with 7-10 pericentral cells, branches formed every two segments, and coalesced with main axis over 1-1.25 axial segments, and tetrasporangia formed in straight series on determinate branches of the upper parts of erect axes. A phylogenetic analysis of rbcL sequences demonstrated that P. arenosa was distinct from P. pennata found in Spain as well as other species. In conclusion, morphological and molecular sequence data indicated that P. arenosa sp. nov. has been previously misidentified as P. pennata in Korea.

• International Journal of Oral Biology
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• v.38 no.2
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• pp.43-49
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• 2013

The objective of this study was to develop PCR primers that are specific for Streptococcus sanguinis, Streptococcus parasanguinis, and Streptococcus gordonii. We designed the S. sanguinis-, S. parasanguinis-, and S. gordonii-specific primers, Ssa21-F3/Ssa21-R2, Spa17-F/Spa17-R, and Sgo41-F1/Sgo41-R1 respectively, based on the nucleotide sequences of the Ssa21, Spa17, and Sgo41 DNA probes that were screened using inverted dot blot hybridization (IDBH). The species-specificity of these primers was assessed against 43 strains of mitis group streptococci, including clinical strains of S. sanguinis, S. parasanguinis, and S. gordonii. The resulting PCR data revealed that species-specific amplicons had been obtained from all strains of the target species tested, and that none of these amplicons occurred in any other strains from other species. These results suggest that the Ssa21-F3/Ssa21-R2, Spa17-F/Spa17-R, and Sgo41-F1/Sgo41-R1 primers may be useful in detecting S. sanguinis, S. parasanguinis, and S. gordonii at the species level, respectively.

• Journal of Species Research
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• v.8 no.2
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• pp.197-214
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• 2019

The taxonomic hierarchy of the phylum Proteobacteria was assessed, after which the isolation and classification state of Proteobacteria species with valid names for Korean indigenous isolates were studied. The hierarchical taxonomic system of the phylum Proteobacteria began in 1809 when the genus Polyangium was first reported and has been generally adopted from 2001 based on the road map of Bergey's Manual of Systematic Bacteriology. Until February 2018, the phylum Proteobacteria consisted of eight classes, 44 orders, 120 families, and more than 1,000 genera. Proteobacteria species isolated from various environments in Korea have been reported since 1999, and 644 species have been approved as of February 2018. In this study, all novel Proteobacteria species from Korean environments were affiliated with four classes, 25 orders, 65 families, and 261 genera. A total of 304 species belonged to the class Alphaproteobacteria, 257 species to the class Gammaproteobacteria, 82 species to the class Betaproteobacteria, and one species to the class Epsilonproteobacteria. The predominant orders were Rhodobacterales, Sphingomonadales, Burkholderiales, Lysobacterales and Alteromonadales. The most diverse and greatest number of novel Proteobacteria species were isolated from marine environments. Proteobacteria species were isolated from the whole territory of Korea, with especially large numbers from the regions of Chungnam/Daejeon, Gyeonggi/Seoul/Incheon, and Jeonnam/Gwangju. Most Halomonadaceae species isolated from Korean fermented foods and solar salterns were halophilic or halotolerant. Air-borne members of the genera Microvirga, Methylobacterium, and Massilia had common characteristics in terms of G+C content, major respiratory quinones, and major polar lipids.

• Journal of Ecology and Environment
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• v.34 no.3
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• pp.287-293
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• 2011

Analysing companion species from unrelated taxa concentrated so far mainly on identifying biosurrogacy in terms of conservation biology. No study has investigated companion bird and plant species to predict breeding and migrant habitats of a bird genus. In this study we recorded and analysed companion bird and plant species of the breeding bird Cyprus Wheatear Oenanthe cypriaca and four migranting Oenanthe species on Cyprus. We found characteristic companion species in Cyprus Wheatear's, Wheatear migrant's and in control habitats where no Wheatears were present. We show that plant and bird companion species can be used as discriminating factors to predict breeding and migrant habitats of the genus Oenanthe on Cyprus. Furthermore, habitat preferences of Cyprus Wheatear's companion species indicate bushy and vegetation rich habitats avoiding woodland on the one hand and managed farmland on the other hand. In comparison, migrant Wheatear and control habitats were characterised by companion species pointing to a high openness. These results support former habitat descriptions of Cyprus Wheatear and migrant Wheatears. In more general, this study shows that companion species from unrelated taxa can be used to predict breeding and migrant habitats of a bird genus.

• Journal of Ecology and Environment
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• v.31 no.2
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• pp.147-151
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• 2008

Feeding methods of five species of herons and egrets were studied in an agricultural landscape in Asan city, Chungcheongnam-do, Korea in 2006. Grey herons primarily hunted while standing, whereas great egrets fed while walking slowly. Two smaller species, little and cattle egrets, were active foragers, feeding both while walking quickly and walking slowly. Little egrets were the only species using the foot stirring method. The medium-sized heron, intermediate egrets, foraged mainly while walking slowly or leaning. For grey herons, great egrets and little egrets, the frequency of use of different feeding methods was different between habitats: these species used the leaning method more frequently in rice fields than in reservoirs and ditches. Also, most herons (all species other than great egrets) showed seasonal changes in their feeding methods that are related to changes in habitat condition.