• 한국토양동물학회지
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• 제3권1호
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• pp.19-24
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• 1998

The importance of the gut microorganism in the termite, Reticulitermes Speratus kyushuenesis Morimoto, was estimated by feeding with several antibiotics. Antibiotics which killed the bacterium, but not the fungi (Ampicillin, Kanamycin, Erythromycin), or killed both the microorganismw (Cephaloridine, Tetracycline) reduced the life span of the termite from 245 days to about 15 days. On the other hand, some antibiotics, penicillin and pimaricin, did not greatly reduce the life span of the termite.

• 한국미생물학회:학술대회논문집
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• 한국미생물학회 2005년도 International Meeting of the Microbiological Society of Korea
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• pp.187.4-187
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• 2005

• Journal of Microbiology and Biotechnology
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• 제11권6호
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• pp.940-945
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• 2001

Symbiobacterium toebii has been previously reported as a novel commensal thermophile exhibiting a commensal interaction with thermophilic Geobacillus sp. SK-1. We investigated the distribution of this commensal thermophile in various soils using molecular methods, such as quantitative PCR and terminal restriction fragment polymorphism analysis. Based on a nested competitive quantitative PCR the 16S rDNA of the commensal thermophile was only detected in compost soils at about $1.0{\times}10^4$ cpoies per gram of soil, corresponding to $0.25{\times}10^4$ cells per gram of soil. However, in an enrichment experiment at $60^{\circ}C$, about $1.0{\times}10^8$ copies of 16S rDNA molecules were detected per ml of enriched culture broth for all the soils, and more than 0.1 mM indole accumulated as the product of commensal bacterial growth. When incubated at $30^{\circ}C$, neither the 16S rDNA of the commensal bacterium nor any indole accumulation was detected. Accordingly, even though the 16S rDNA of the bacterium was only detected in the compost soils by a nested PCR, the presence of the 16S rDNA molecules of commensal thermophile and accumulation of indole in all the enriched cultures appeared to indicate that the commensal thermophile is widely distributed in various soils.

• Journal of Microbiology and Biotechnology
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• 제20권3호
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• pp.602-608
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• 2010

An atrazine-degrading bacterium, strain KU001, was obtained from a sugarcane field at the Cane and Sugar Research and Development Center at the Kasetsart University, Kamphaeng Saen Campus, Thailand. Strain KU001 had a rod-to-coccus morphological cycle during growth. Biolog carbon source analysis indicated that the isolated bacterium was Arthrobacter histidinolovorans. Sequence analysis of the PCR product indicated that the 16S rRNA gene in strain KU001 was 99% identical to the same region in Arthrobacter sp. The atrazine degradation pathway in strain KU001 consisted of the catabolic genes trzN, atzB, and atzC. Strain KU001 was able to use atrazine as a sole nitrogen source for growth, and surprisingly, atrazine degradation was not inhibited in cells grown on ammonium, nitrate, or urea, as compared with cells cultivated on growth-limiting nitrogen sources. During the atrazine degradation process, the supplementation of nitrate completely inhibited atrazine degradation activity in strain KU001, whereas ammonium and urea had no effect on atrazine degradation activity. The addition of strain KU001 to sterile or nonsterile soils resulted in the disappearance of atrazine at a rate that was 4- to 5-fold more than that achieved by the indigenous microbial community. The addition of citrate to soils resulted in enhanced atrazine degradation, where 80% of atrazine disappeared within one day following nutrient supplementation.

• Journal of Microbiology and Biotechnology
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• 제23권2호
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• pp.237-245
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• 2013

Canthaxanthin (cx) is a potent antioxidant that is chemically synthesized at the industrial scale and has imperative applications in the cosmetic and feed industries. An orange pigmented mesophilic bacterium, designated as K44, was isolated from soil samples of Kargil, India. Biochemical tests, 16S rRNA gene sequencing, and FAME analysis of the bacterium indicated it to belong in the genus Dietzia and is distinct from human isolates. The strain showed 98% 16S rRNA gene sequence homology with Dietzia maris DSM 43102. High-performance liquid chromatography profile of the pigments isolated from K44 showed two major peaks absorbing at 465.3 and 475 nm. The liquid chromatography-mass spectrometry (LC-MS) analysis of both these peaks revealed their m/z to be 564. The molecular weights, LC-MS/MS fragmentation patterns, and ${\lambda}_{max}$ of these fractions corresponded to all-trans- (475 nm) and 9-cis-(465.3 nm) cx isomers. The antioxidant activities of cis- and trans-cx isomers isolated from this bacterium were found to differ, where the cis-isomer showed higher free radical, superoxide radical, and reactive oxygen species scavenging activities than the alltrans- isomer, suggesting that 9-cis-cx is more effective as an antioxidant than the all-trans-cx.

• 한국토양비료학회지
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• 제35권4호
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• pp.223-231
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• 2002

인산가용 미생물인 Enterobacter intermedium 60-2G의 식물생장촉진 능력과 흑성병균인 Cladosporium cucumerinum에 대한 유도전신저항성 능력을 오이와 오이 흑성병균을 모델로 확인하였다. E. intermedium 을 처리한 오이는 물을 처리한 control에 비해 C. cucumerinum에 의한 흑성병의 병징이 현저히 감소하였다. 또한 E. intermedium를 처리한 오이는 식물 생장촉진효과도 보였다. Strain 60-2G은 Fusarium oxysporum와 Magnaporthe grisea을 포함한 여러 식물 병원 곰팡이에 대해 강한 항균활성을 나타내었다. 본 연구는 인산가용능력을 가진 E. intermedium 60-2G는 식물의 생육을 증진시키는데 관여하는 여러가지 유익한 형질을 가진 아주 유용한 생물적 방제균임을 밝혔다.

• Journal of Microbiology and Biotechnology
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• 제17권11호
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• pp.1890-1893
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• 2007

A bacterium, Burkholderia sp. JBA3, which can mineralize the pesticide parathion, was isolated from an agricultural soil. The strain JBA3 hydrolyzed parathion to p-nitrophenol, which was further utilized as the carbon and energy sources. The parathion hydrolase was encoded by a gene on a plasmid that strain JBA3 harbored, and it was cloned into pUC19 as a 3.7-kbp Sau3AI fragment. The ORF2 (ophB) in the cloned fragment encoded the parathion hydrolase composed of 526 amino acids, which was expressed in E. coli DH10B. The ophB gene showed no significant sequence similarity to most of other reported parathion hydrolase genes.

• 한국지하수토양환경학회:학술대회논문집
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• 한국지하수토양환경학회 2001년도 추계학술발표회
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• pp.75-78
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• 2001

Authors evaluated the feasibility of a permeable reactive biobarrier (PRB) treated with biofilm formed by Beijerinckia indica (B.indica). This study focused on evaluating two potentials of B.indica for the requirements of PRB: reducing the hydraulic conductivity and degrading the polycyclic aromatic hydrocarbons (PAHs). The hydraulic conductivity was estimated by rigid wall column test and finally the values were converted to the values of intrinsic permeability. The nutrient solution was passed through the biobarrier column to activate the bacterium and then leachate was in turn carried into the column to evaluate the durability of the biobarrier. Phenanthrene was selected as a representative substance of PAHs. The ability of degrading phenanthrene by B.indica was evaluated by two-phase partitioning bioreactor after estimating the possibility with two pretests: observing the colony formation and the optical density on glucose-free medium containing phenanthrene. With the results, B.indica produced large amount of strongly adhesive exopolysaccharides (EPS) and reduced several orders of magnitude of the hydraulic conductivity after 2 weeks of cultivation. Furthermore, about 1000mg/1 of phenanthrene could be degraded by B.indica in the two-phase partitioning bioreactor. In conclusion, the application of the bacterium, B.indica, was found to have a potential role of a PRB to retain and remove contaminants in porous media.

• 한국지하수토양환경학회지:지하수토양환경
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• 제20권3호
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• pp.83-91
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• 2015

Mine soil contamination by high levels of metal ions that prevents the successful vegetation poses a serious problem. In the study presented here, we used the microbial biocatalyst of urease producing bacterium Sporosarcina pasteurii or plant extract based BioNeutro-GEM (BNG) agent. The ability of the biocatalysts to bioremediate contaminated soil from abandoned mine was examined by solid-state composting vegetation under field conditions. Treatment of mine soil with the 2 biocatalysts for 5 months resulted in pH increase and electric conductivity reduction compared to untreated control. Further analyses revealed that the microbial catalysts also promoted the root and shoot growth to the untreated control during the vegetation treatments. After the Sporosarcina pasteurii or plant extract based BNG treatment, the microbial community change was monitored by culture-independent pyrosequencing. These results demonstrate that the microbial biocatalysts could potentially be used in the soil bioremediation from mine-impacted area.

• 한국식물병리학회지
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• 제14권6호
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• pp.710-713
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• 1998

Spatial distribution in soil and seasonal population changes of Pasteuria nishizawae first found in Korea from soybean cyst nematode were studied. P. nishizawae infested in 61% of areas in a soybean field; in an average, about 0.3% of 46 cysts and 17.6% of 9 juveniles per 100 g soil were infested with the bacterium. The highest percentages of spore-attached nematodes were found in July (75%) and between soil depth of 11~20 cm. The number of spores per juvenile was positively correlated with the percentage of juveniles with spores (r=0.4203; P＜0.0133), but negatively correlated with the number of juveniles in soil (r=-0.3499; P＜0.042). P. nishizawae completed its life cycle in cyst and produced 1.7$\times$105 spores per cyst.