• Title/Summary/Keyword: size diversity

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Analysis of the Diversity of Methicillin Resistant Staphylococcus aureus (MRSA) Strains Isolated from Diarrhea Patients in Busan Area (부산지역 설사환자에서 분리한 MRSA 균주의 다양성 분석)

  • Choi, Seong-Hwa;Park, Eun-Hee;Park, Yon-Koung;Kim, Joung-A;Kim, Nam-Ho;Lee, Young-Suk;Bin, Jae-Hun;Park, Ho-Kuk
    • Journal of Life Science
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    • v.18 no.8
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    • pp.1083-1089
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    • 2008
  • We investigated the molecular epidemiological characteristic of methicillin resistant Staphylococcus aureus (MRSA) strains isolated from stool samples in Busan from 2004 to 2006. Among 142 isolates of S. aureus, 49 isolates (34.5%) were confirmed as MRSA. With the antimicrobial susceptibility tests, 37 isolates (75.5%) showed multiple resistance to more than 10 antibiotics, but all isolates were sensitive to vancomycin. All of MRSA had enterotoxin A in 30.6%, B 4.1%, C 8.3%, D, C/G, A 2.0% and None 51%. PFGE of SmaI-digested chromosomal DNA was performed on 49 sporadic MRSA isolates. Restriction fragment patterns consisted of 8 to 14 fragments ranged in size from 48.5 to 630.5 kbp. We could divided the isolates into 7 groups ($I{\sim}VII$) by analyzing PFGE patterns. Group I subdivided as 2 subgroups and 17 (34.7%) strains belong to the group I. Dendrogram of PFGE patterns showed that MRSA strains in Busan were heterogeneous but we could find out minor homogeneity in hospital.

Diversity of VC and incidence of hypovirulence-associated ds-RNAs in the chestnut blight fungus Cryphonectria parasitica in Korea

  • Byeongjin Cha;Jinyoung Lim;Ju, Young-Jik;Kim, Dae-Hyuk
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.23-23
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    • 2003
  • Chestnut blight, caused by Cryphonectria parasitica, is the most destructive disease of American and European chestnut trees. A total of 672 C prasitica was isolated from blight lesion on chestnut twigs, which were collected from major chestnut plantations all over Korea in 1999. Isolation rates were over 30% in Kyunggj-, Kyongnam-, and Chonnam-do. The highest isolation rate was 37.4% and recorded in Kyongnam-do. On the other hand, Chonbuk-do had the lowest isolation rate as 13.5%. In grouping of C parasitica by colony shape and color, yellow colony with irregular margin were the most dominant colony type with a frequency of 65.2%. When the 672 isolates were inoculated on the chestnut twigs, 380 isolates (56.5%) caused lesions larger than the standard virulent isolate EP155-2, while 158 isolates (23.4%) caused smaller lesions than the standard hypovirulent isolate UEP-1. In Bavendamm test that determines phenol oxidase activity, 97.1% of all the isolates resulted the same or darker discoloration than EP155-2, and only 12.2% resulted the same or lighter discoloration than UEP-1. In the vegetative compatibility (VC) tests, total 670 isolates were divided into 121 VC groups (VCGs). Kyongnam-, Chonnam-, and Chungnam-do, the three principal chestnut plantation area, had 49, 33, and 27 VCGs, respectively. Among the VCGs, the biggest VCG, KR-VC104, was composed of 164 isolates and the second biggest VCG had 62 isolates. But, 64 of 121 VCGs consisted of sole member. More than 65.8% of KR-VC104, was isolated from the three provinces, Kyongnam-, Kangwon-, and Chungbuk-do. In KR-VC104, 62.8%, 59.1%, and 85.9% of the isolates looked like virulent in colony type, pathogenicity test, and Bavendamm test. In ds-RNA detection tests using cellulose chromatography, 77 of total 650 isolates were ds-RNA positive and detected ds-RNA segments were approximately 12kb, 3kb, 2.7kb, 2kb, and 1.8kb in size. Among the 77 isolates, 46 isolates had 12kb and 25 isolates had 12kb and 2.7kb. Other 6 Isolates had small ds-RNA segments. Kyongnam-, Chonnam-, and Chungnam-do had 43, 16, and 5 ds-RNA positive isolates, respectively. Among the 121 VCGs, only 29 VCGs had ds-RNA positive isolates.(중략)

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Changes Over Time in the Community Structure and Spatial Distribution of Forest Vegetation on Mt. Yeompo, Ulsan City, South Korea (염포산 산림식생의 군락 구조 및 공간 분포의 경시적 변화)

  • Oh, Jeong-Hak;Kim, Jun-Soo;Cho, Hyun-Je
    • Journal of Korean Society of Forest Science
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    • v.109 no.2
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    • pp.145-156
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    • 2020
  • In 2000 and 2018, phytosociological surveys were carried out in the forest vegetation of Mt. Yeompo, a representative isolated urban forest in Ulsan city. The trends of change in forest structure, composition, and spatial distribution were compared between years. Total percent coverage per 100 squaremeters of forest vegetation was similar, but natural vegetation showed a 9% increase. The importance of constituent species changed slightly. Specifically, Lindera erythrocarpa and Styrax japonicus showed very high growth rates of 835% and 269%, respectively. Species richness (S) and diversity (H') decreased by about 22% and 8%, respectively. Both S and H' showed slightly higher rates of decrease in artificial compared with natural vegetation. The constituent species life form spectrums were the same in 2000 and 2018 as 'MM-R5-D4-e'. The similarity (Jaccard coefficient) in the species composition of the forest vegetation was almost homogeneous at approximately 75%. The number of indicator species decreased from 16 species in 2000 to 7 species in 2018. This decrease was mostly due to a decline in herbaceous plants, such as Hemicryptophytes, Geophytes, and Therophytes, which are sensitive to disturbances. The spatial distribution of forest vegetation did not change significantly. The number of forest landscape elements (patches) increased by approximately 25% from 537 in 2000 to 721 in 2018, while the average size decreased by about 20% from 1.28 ha in 2000 to 1.03 ha in 2018.

Genomic Structure Analyses of Five Kinds of Human Sialyltransferase Gene (5종류의 인간유래 시알산전이효소 유전자들의 게놈구조 분석)

  • Kang Nam-Young;Kim Sang-Wan;Kim Cheorl-Ho;Lee Young-Choon
    • Journal of Life Science
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    • v.14 no.6 s.67
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    • pp.1009-1017
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    • 2004
  • Sialyltransferases cloned so far show the remarkable tissue-specific expression, which is correlated with the existence of cell type-specific sialylated sugar structure in glycoconjugates. In the previous studies, we found various mRNA isoforms of human sialyltransferases generated by alternative splicing and alternative promoter utilization. To understand the regulatory mechanisms for specific expression of human sialyltransferase genes and for production of their mRNA isoforms, in this study, we have isolated and characterized five kinds of human sialyltransferase genes: hST3Gal II, hST8Sia II, hST8Sia III, hST8Sia IV, and hST8Sia V. The hST3Gal II gene is composed of six exons, which span over 17kb, with exons ranging in size from 46 to over 1017 bp. The hST8Sia III gene comprises over 10 kb, and consists of only four exons, which is much smaller and simpler than other human sialyltransferase genes. In contrast, three genes (hST8Sia II, hST8Sia IV and hST8Sia V) span more than 70 kb, and comprise five or more exons. All exon-intron boundaries follow the GT-AG rule. In particular, the sialylmotif L, which is a highly conserved region in all cloned sialyltransferases, was found in one exon of hST8Sia III, whereas this motif is encoded by discrete exons in the other human sialyltransferases. Exon structures of these sialyltransferase genes show the structural diversity, as found in other human sialyltransferase genes reported so far. We determined the transcription start site of hST3Gal II gene by the 5'-RACE and cap site hunting experiments.

Similarity of Zooplankton Community Structure among Reservoirs in Yeongsan-Seomjin River Basin (영산강, 섬진강 수계 내 주요 저수지에 대한 동물플랑크톤 군집 구조의 유사성 분석)

  • Ko, Eui-Jeong;Kim, Gu-Yeon;Joo, Gea-Jae;Kim, Hyun-Woo
    • Korean Journal of Ecology and Environment
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    • v.52 no.4
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    • pp.285-292
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    • 2019
  • Our study was based on the long-term surveys with respect to the major reservoirs located in the Yeongsan and Seomjin river basins. A total of 45 survey sites have been surveyed four times a year from 2008 to 2017. We identified 166 zooplankton species, including 127 rotifers, 26 cladocerans, and 13 copepods. Mean population density and species number of small reservoirs were higher than those of mid and large reservoirs. Considering outliers exceeding the 90th percentile between species occupancy and mean abundance, 10 of 11 habitat generalists were rotifers, and Bosmina longirostris was the only cladoceran. Habitat specialist consisted of three species of rotifers and emerged from one to three survey sites. According to the modularity results, it was found that the survey sites covering the entire river basins were characterized into five groups, which was similar to the classification by maximum water surface areas(MWSA). The result of the eigenvector centrality showed that the size of MWSA had a greater impact on the similarity of zooplankton community structure between reservoirs than the difference in distance between reservoirs. In the case of survey points in near dam or estuary bank of Juam and Youngsan reservoirs, modularity class were separated from other internal survey points of those. Given that the zooplankton interactions may contribute to freshwater functions more than species diversity. These topological features provide new insight into studying zooplankton distribution patterns, their organization and impacts on freshwater-associated function.

Performance of Thrie-Beam Guardrail System withe Impact Attenuator (에너지 흡수 장치를 부착한 트라이빔 가드레일 시스템의 거동)

  • Ko, Man-Gi;Kim, Kee-Dong
    • Journal of Korean Society of Steel Construction
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    • v.13 no.4
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    • pp.381-393
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    • 2001
  • The current traffic situation in Korea can be described as rapid change in traffic volume and diversity in vehicle size from compact cars to large trucks. W-beam barrier most widely used in Korea was found not to satisfy the stiffness requirement for the Koran impact condition of 14 ton-60Km/h-15deg. and it was too stiff for small vehicles impacting with more realistic speed to satisfy the safety of vehicle occupants. To develop a guardrail system satisfying the two contradicting goals, a thrie-beam guardrail system, which had the beam thickness of 3.2mm and rubber cushions, was conceived. Even though the height of the thrie-beam(450mm) is increased by 100mm as compared to that of W-beam (350mm), there was only 2% increase in the weight of the thrie-beam. The new thrie-beam barrier system could contain more wide range of vehicle bumper heights, and showed better performance in the viewpoint of stiffness and energy absorbing capability than the W-beam system. The impact performance was evaluated from a crash test. The developed thrie-beam guardrail system satisfied all applicable criteria for NCHRP 350 test designation 3-10.

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A Study on the Housing Adjustment in the First Half of Cho-Sun Dynasty - with special perspectives of microsociological approach - (조선전반기 가족의 주거조절에 관한 연구 - 미시사회학적 접근으로 -)

  • Hong, Hyung-Ock
    • Journal of architectural history
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    • v.2 no.1 s.3
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    • pp.25-41
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    • 1993
  • This study was made to analyze the housing adjustment phenomenon in the first half of Chosun Dynasty by applying Microsociological approach. By reviewing the housing adjustment theory of Morris and Winter, research model for the period was developed in terms of socioeconomic characteristics, normative housing deficit (=cultural norm-housing condition+family norm), constraints, behavioral propensities, and housing adjustment mechanism with the following results : 1. In the first half of Chosun Dynasty the size of the house, the house site and decorating items were specified by law (cultural norm) according to the social status. Although the law was constraints for the housing phenomenon, it was not applied universally. Frequantly the law was violated by the upper class. By the middle of the Dynasty the family norm became more important for the housing phenomenon than the cultural norm. 2. Efforts were made to practice the Confucianism as a cultural norm in the first half of Chosun Dynasty At that time Husband-Living-in-Wife's-House was more popular than Wife-Living-in-Husband's-House. Because the customs were against the Confucianism, the latter was encouraged by law. But it did not change. Instead a compromised system became popular in the middle of the Dynasty. The house shrine was practiced to increase the symbolism of the family, which, in turn, exerted influences in deciding the housing site (cultural norm). These cultural norm was not accepted as the family norm untill the second half of the Dynasty. These trends forced the man and woman use separate areas of the house, and formulated a hierarchic positions within a house. 3. It was shown that the settlement of Confucianism as a family norm was closely related to the popularization of the Ondol system in the house, which functioned as one of the behavioral propensities to encourage diversity of space for many purposes. Though the Ondol system was accepted as a useful heating system earlier, this became more popular in the middle of the Dynasty because the housing pattern with Ondol fitted very well with a large family system with patriarchism. Ondol system for one or two rooms substituted Ondol for all rooms in the second half of the Dynasty. 4. From the beginning of the Dynasty housing adjustment of the family was determined by the social status and by law (cultural norm). Within this cultural norm each family decided its adjustment mechanism according to its economic ability (family norm). Family norm was more important factor than the cultural norm to determine the micro-space pattern in the house. But this period witnessed the formations of new conditions by the ruling class's efforts to implement new ethics for hierarchy and sexual discrimination. According to these conditions the Confucianism overruled the family norm in the later period.

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A Study on the Design of Office Filing System Furniture (사무용 수납가구의 디자인 특성에 관한 연구)

  • 신화경;하숙녕
    • Archives of design research
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    • v.15 no.4
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    • pp.129-138
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    • 2002
  • Against the projection that the volume of filing would be drastically cut in the Information Age, the needs for filing in this age increases gradually. In this respect, it is critical to study the design of office filing system furniture. Through this study, we could find out what shall be the major requirements for office lijillg system furniture. This study would also provide important raw data for developing more efficient and more satisfactory office filing system furniture. Subject for this study includes 6 representative filing system furniture including a lateral file cabinet. For the design analysis, we used catalogues of foreign and domestic office furniture, particularly filing system furniture. The analysis is classified into the following six categories such as size, shape, color, material, handle, and filing method, mobility, flexibility, and so on. According to the analysis of office furniture in the market, requirements of furniture fit for office environment are found to be as follows. -Instead of the fixed-type furniture, movable furniture is more adaptable to the ever-evolving office environment. -Design the office furniture in accordance with a standardized module would provide a more unity and diversity of arrangement in space particularly when it is arranged with other furniture. -Development of more diverse color, which ranges from achromatic color to wooden color to other various colors, is more favored in the ever-changing office environment. -As the grip provides a variety of image to the furniture let alone its function, its development is required to be more diverse and more conforming 10 the design of Ihe furniture. -The filing methods in general are with drawer and shelf, among which the drawers design is usually fixed. However, under the evolving office furniture environment, the design of Ihe drawer, bolh inlerior and exterior, shall be more diverse and flexible.

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The City Ecological Soundness Index Development Based on the City Biodiversity Index (CBI) and Korean City Characteristics (우리나라 도시 특성을 고려한 도시생물다양성지수 적용성 검토 및 도시의 생태적 건전성 평가지표 개발)

  • Yun, Hyerngdu;Lee, Jangho;Choi, Intae;Park, Seokcheol;Han, Bongho;Kim, Myungjin
    • Journal of Environmental Impact Assessment
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    • v.25 no.6
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    • pp.442-456
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    • 2016
  • The Secretariat of the Convention on Biological Diversity (SCBD) encourages the use of the City Biodiversity Index (CBI) as a monitoring tool to assist local authorities in evaluating their progress in urban biodiversity conservation. The CBI has been applied to conserve the city biodiversity. This study has developed the City Ecological Soundness Index (CESI) based on the CBI and Korean city characteristics. The CESI includes total of 12 indicators grouped in three categories, which are 'biodiversity,' 'ecosystem services' and 'governance and management.' 85 cities in Korea were classified according to the city size and type. 18 cities have applicable biotope map, which were analyzed in the CESI pilot study. The CESI will contribute to collect and manage biodiversity data systematically and to promote biodiversity-related actions.

The Community Structure of Meiofauna in Marian Cove, King George Island, Antarctica (남극 킹조지섬 마리안소만의 중형저서동물 군집구조)

  • Hong, Jung-Ho;Kim, Ki-Choon;Lee, Seung-Han;Back, Jin-Wook;Lee, Dong-Ju;Lee, Won-Choel
    • Ocean and Polar Research
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    • v.33 no.3
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    • pp.265-280
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    • 2011
  • The temporal dynamics of the meiofauna community in Marian Cove, King George Island, Antarctica were observed from March 7 to December 21 2007. Nine meiofauna taxa were found, with nematodes the most dominant group, making up 92.97% of the total meiofauna density, followed by harpacticoid copepods (3.18%). Meiofauna abundance ranged from 123 to 874 individuals per 10 $cm^2$ (mean 464 inds.10 $cm^{-2}$), which is lower than that found in some polar and temperate regions. The lowest meiofauna abundance was found in the 26th April sample (III) and the highest meiofauna abundance was found in the March 23rd sample (II). There was no correlation between meiofauna abundance and season. The seasonal changes were likely caused by meltwater runoff, and there were the physical disturbances on the bottom sediment by huge iceberg. Biomass of meiofauna varied between 20.36 and 101.02 ${\mu}gC{\cdot}10\;cm^{-2}$, and overall mean biomass was 54.17 ${\mu}gC{\cdot}10\;cm^{-2}$ during the study periods. More than 80% of meiofauna was concentrated in the upper 2 cm of the sediment, and density decreased with depth. The mean diversity index was 0.37, and the ratio between the abundance of nematodes: and harpacticoids (N/C) ratio ranged from 7.31 to 95.04 (mean 26.39). NMDS analysis divided the community into three groups: A (III, IV, V, VII, VIII), B (II, IX, XI, XII) and C (I, V, X). The results of ANOSIM and SIMPER analysis revealed significant differences in community structure among three groups and major contributed meiofauna taxon in grouping were nematodes and copepods. No significant correlations were observed between major meiofauna taxon and environmental factors. Thirteen species in 12 genera representing nine families of harpacicoids were recorded. Ancorabolidae was the most diverse family, and Heteropsyllidae was the most abundant. The correlation analysis between benthic harpacticoid copepods and environmental factors showed that some species were affected by water temperature, sediment temperature, salinity, chlorophyll a concentration, grain size of the sediments and heavy metal contents of the sediments. These data describe the usefulness of benthic harpacticoid copepods as biological indicator species in Antarctic regions.