• Title/Summary/Keyword: size diversity

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Genetic Diversity and Population Structure of Kaloula borealis (Anura, Microhylidae) in Korea

  • Yang, Suh-Yung;Kim, Jong-Bum;Min, Mi-Sook;Suh, Jae-Hwa;Kang, Young-Jin
    • Animal cells and systems
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    • v.4 no.1
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    • pp.39-44
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    • 2000
  • To assess the genetic diversity and population structure of Korean K. borealis, allozyme analysis was performed. The average genetic variability of Korean K. borealis populations was %P=13.2, Ho=0.048, and He=0.045. This value was the lowest in comparison with other Korean amphibian species studied. Also, the value was much lower than that of a reference population from Chinese K. borealis (%P=50, Ho=0.125, He=0.172). Wright's F-statistics showed that Korean K. borealis has distinctly low level of gene flow among regional populations (F$_{ST}$=0.339, Nm=0.487) in comparison with other Korean amphibian species studied. However, the average level of genetic divergence among Korean K. borealis populations was moderate (Nei's D=0.020). Therefore, it appeared that low levels of genetic diversity (He=0.045) and gene flow (Nm=0.487) among regional populations ave probably due to the results of decreasing population size and patchy distribution of this species in Korea.

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Vegetation Structure of Mountain Ridge in Midongsan, Chungcheongbuk-do

  • You, Ju-Han
    • Korean Journal of Plant Resources
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    • v.21 no.3
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    • pp.216-221
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    • 2008
  • The Purpose of this study was to offer the raw data for drawing up the conservation plan by analysing natural vegetation in Midongsan, Chungcheongbuk-do, Korea. The period of survey was from July to October, 2004 and the size of plot was 100$m^2$. In the results of analyzing the physical environments, the range of altitude was 303${\sim}$550m and soil pH was 5.4${\sim}$6.8. The angle of slope was 3${\sim}$57% and topographical factor was composed of ridgeline. In the results of analyzing a importance percentage, the dominant species in tree layer, Pinus rigida, P. densiflora, Quercus mongolica, Q. variabilis and Q. acutissima, P. rigida, Q. mongolica, Q. acutissima, Platycarya strobilacea and Q. variabilis in subtree layer, Rhododendron mucronulatum, Symplocos chinensis for pilosa, Lindera obtusiloba, L. erythrocarpa, Rhus trichocarpa and Weigela subsessilis in shrub layer. In the results of species diversity index, species diversity (H') was from 1.2401 to 2.5540, maximum species diversity (H'max), from 1.9459 to 2.8904, evenness (J'), from 0.5644 to 0.8836, dominance (D), from 0.1164 to 0.4356.

Seasonal Changes in Cyanobacterial Diversity of a Temperate Freshwater Paldang Reservoir (Korea) Explored by using Pyrosequencing

  • Boopathi, Thangavelu;Wang, Hui;Lee, Man-Duck;Ki, Jang-Seu
    • Korean Journal of Environmental Biology
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    • v.36 no.3
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    • pp.424-437
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    • 2018
  • The incidence of freshwater algal bloom has been increasing globally in recent years and poses a major threat to environmental health. Cyanobacteria are the major component of the bloom forming community that must be monitored frequently. Their morphological identities, however, have remained elusive, due to their small size in cells and morphological resemblances among species. We have analyzed molecular diversity and seasonal changes of cyanobacteria in Paldang Reservoir, Korea, using morphological and 16S rRNA pyrosequencing methods. Samples were collected at monthly intervals from the reservoir March-December 2012. In total, 40 phylotypes of cyanobacteria were identified after comparing 49,131 pyrosequence reads. Cyanobacterial genera such as Anabaena, Aphanizomenon, Microcystis and Synechocystis were predominantly present in samples. However, the majority of cyanobacterial sequences (65.9%) identified in this study were of uncultured origins, not detected morphologically. Relative abundance of cyanobacterial sequences was observed as high in August, with no occurrence in March and December. These results suggested that pyrosequencing approach may reveal cyanobacterial diversity undetected morphologically, and may be used as reference for studying and monitoring cyanobacterial communities in aquatic environments.

Proposal of biodiversity recovery plan through the creation of reclaimed wetland (간척지 습지 조성을 통한 생물다양성 회복 방안 제안)

  • Lee, Jeong-Sik;Seo, Seon-Jin;Lee, Seunghee;Sung, Ha-Cheol
    • Journal of Integrative Natural Science
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    • v.15 no.3
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    • pp.111-122
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    • 2022
  • The purpose of this study was to investigate the ecological impact of wetlands by changing the species diversity of benthic macroinvertebrates and birds following the creation of an artificial wetland with a size of 30 m*30 m on bare land in reclaimed land in Haenam-gun, Korea. We investigated monthly fauna of benthic macroinvertebrates and birds in and outside wetlands and physicochemical indicators for 7 months from March to September 2014. During the study period, the water temperature and dissolved oxygen levels were consistently higher in wetlands than lakes. Many species of benthic macroinvertebrates were observed in summer (16 species in July) due to seasonal effects, and the species diversity index was highest in July and then gradually decreased. Thirteen species of birds were observed in March, 6 species in April, 5 species in July, and 1 species in June, where most winter birds and migratory birds were observed around wetlands in spring. The species diversity index also decreased after being high in July except for spring. This suggests that the abiotic environment in the wetland can be improved by creating an artificial wetland in the reclaimed land, and the increase in benthic macroinvertebrates can ultimately be a basic direction to restore the wetland ecosystem in the reclaimed land.

An Empirical Analysis on Public Transportation Demand and TOD Design Factors in Seoul subway adjacent area (서울시 역세권의 TOD환경과 대중교통이용수요 관계분석)

  • Moon, Young-Il;Rho, Jeong-Hyun
    • International Journal of Highway Engineering
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    • v.13 no.4
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    • pp.211-220
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    • 2011
  • TOD(Transit Oriented Development) has recently been active, which presents that TOD planning elements should be comprehensively taken into consideration in order to enhance domestic transit ridership by changing environments in rail station areas and an empirical analysis on the type of rail station areas and transportation demand should be a prerequisite for usage of future development planning. This study aims to grasp a variety of TOD of influence factors in Seoul rail station area and to perform analysis to identify relationship between public transportation demand and these TOD design factors. To make it come true, we gathered data with respect to Density, Diversity, and Accessibility as representative TOD planning elements and carried out factorial and regression analysis. Consequently, we drew 7 influence factors base on factorial analysis: Factor 1(Diversity/ -Use Mix(LUM)), Factor 2(Density/development density), Factor 3(Accessibility/public transportation facility supply), Factor 4(Design/street design), Factor 5(Green/access mode (pedestrian, bike), Factor 6(Design/subway size), Factor 7(Accessibility/Public transit operation) As the result of model development by using factorial and regression analysis, positive influence factors on passenger flow in rail station area are Factor 1(Diversity : Land-Use Mix), Factor 3(Accessibility : public transportation facility supply), Factor 2(Density : development density), Factor 5(Design/ access mode) and Factor 6(subway size) Next, negative influence factor on passenger flow in rail station area shows Factor 7(Accessibility/Public transit operation) as the most influential factor. This is because the growth of service interval of linked subway and bus leads to reduced demand.

The domestication event of the Tibetan pig revealed to be in the upstream region of the Yellow River based on the mtDNA D-loop

  • Ge, Qianyun;Gao, Caixia;Cai, Yuan;Jiao, Ting;Quan, Jinqiang;Guo, Yongbo;Zheng, Wangshan;Zhao, Shengguo
    • Asian-Australasian Journal of Animal Sciences
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    • v.33 no.4
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    • pp.531-538
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    • 2020
  • Objective: Evidence from previous reports indicates that pig domestication in East Asia mainly occurred in the Mekong region and the middle and downstream regions of the Yangtze River. Further research identified two new origin centers for domestic pigs in the Tibetan Plateau and the islands of Southeast Asia. However, due to the small sample size of Tibetan pigs, details of the origin and spread of Tibetan pigs has not yet been established. Methods: We analyzed mitochondrial DNA control region (D-loop) variation in 1,201 individuals from nine Tibetan pig populations across five provinces. Comprehensive Tibetan pig samples were taken to perform the most detailed analysis of Tibetan pigs to date. Results: The result indicate that Rkaze pigs had the lowest level of diversity, while Changdu pigs had the highest diversity. Interestingly, these two populations were both in the Tibetan Plateau area. If we calculate diversity in terms of each province, the Tibetan Plateau area had the lowest diversity, while the Chinese province of Gansu had the highest diversity. Diversity gradient analysis of major haplotypes suggested three domestication centers of Tibetan pigs in the Tibetan Plateau and the Chinese provinces of Gansu and Yunnan. Conclusion: We found two new domestication centers for Tibetan pigs. One is in the Chinese province of Gansu, which lies in the upstream region of the Yellow River, and the other is in the Chinese province of Yunnan.

A Receive Diversity Combining Technique for SC-PDMA-based Cooperative Relays (SC-FDMA 기반 상호협력 릴레이를 위한 수신 다이버시터 결합 기법)

  • Woo, Kyung-Soo;Kim, Yeong-Jun;Yoo, Hyun-Il;Kim, Jae-Kwon;Yun, Sang-Boh;Cho, Yong-Soo
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.34 no.4A
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    • pp.302-308
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    • 2009
  • In this paper, two receive diversity combining techniques are proposed for single-carrier Sequency division multiple access (SC-FDMA)-based cooperative relay systems when DFT spreading sizes for mobile station (MS) and relay station (RS) are different. A simplified-MRC (5-MRC) technique performs diversity combining in the time domain using the estimated channel weight and initial values obtained by SC-FDMA signal detection. An interference rejection-MRC (IR-MRC) technique performs diversity combining in the frequency domain by adjusting DFT spreading size in the receiver. It is shown by computer simulation that the proposed receive diversity combining techniques achieve a significant performance gain over the conventional MRC technique with zero forcing (ZF) detector.

An Efficient Receive Diversity Combining Technique for SC-FDMA-based Cooperative Relays (SC-FDMA 기반 상호협력 릴레이를 위한 효율적인 수신 다이버시티 결합 기법)

  • Woo, Kyung-Soo;Kim, Yeong-Jun;Yoo, Hyun-Il;Cho, Yong-Soo
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.35 no.4A
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    • pp.307-314
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    • 2010
  • In this paper, a receive diversity combining technique is proposed for single-carrier frequency division multiple access (SC-FDMA)-based cooperative relay systems when discrete Fourier transform (DFT) spreading sizes for mobile station (MS) and relay station (RS) are different. The proposed technique is composed of a DFT spreading size adjustment block, a phase rotation compensation block, a channel phase compensation block, and a receive diversity combining block. The proposed technique is robust to multipath channels and can be operated with a relatively small computational complexity because receive diversity combining is performed with scalar operations in the frequency-domain. It is shown by computer simulation that the proposed receive diversity combining techniques achieve a performance gain over the conventional maximal ratio combining (MRC) techniques for SC-FDMA-based cooperative relay systems.

Analysis on the Correlation Coefficient for the Diversity Technique Combined with Beamforming Using Measurement Data in Underwater Channel Environments (수중 채널 환경에서 측정 데이터를 이용한 빔형성기가 결합된 다이버시티의 상관 계수 분석)

  • Kim, Min-Sang;Cho, Dae-Young;Park, Jong-Won;Lim, Yong-Kon;Ko, Hak-Lim
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.37A no.12
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    • pp.1023-1030
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    • 2012
  • The diversity techniques can benefit underwater acoustic communications when the distance between sensors is sufficiently apart, and this leads to the increases in the physical size of the communication system: thus it is very hard to practically use such systems in real-environments. Therefore, in this paper, we have collected data from real underwater cannel environments in order to analyze the usability of diversity combined with beamforming techniques. And we have estimated the fading characteristics from the measurement data, and analyzed the correlation coefficients using the estimated fading characteristics. After analyzing the estimated fading characteristics from the measurements data, we found out that by applying diversity techniques on the output signals from beamformers that perform beamforming from different multipath directions, we can reduce the distance between sensors and at the same time benefit from the diversity gain.

DNA barcoding for fish species identification and diversity assessment in the Mae Tam reservoir, Thailand

  • Dutrudi Panprommin;Kanyanat Soontornprasit;Siriluck Tuncharoen;Santiwat Pithakpol;Korntip Kannika;Konlawad Wongta
    • Fisheries and Aquatic Sciences
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    • v.26 no.9
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    • pp.548-557
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    • 2023
  • The purposes of this research were to identify fish species using DNA barcodes or partial sequences of cytochrome b (Cytb) and to assess the diversity of fish in the Mae Tam reservoir, Phayao province, Thailand. Fish samples were collected 3 times, during the winter, summer, and rainy seasons, from 2 sampling sites using gillnets with 3 mesh sizes (30, 50, and 70 mm). A total of 34 representative samples were classified into 12 species, 7 families and 6 orders by morphological- and DNA barcoding-based identifications. However, one cichlid species, Cichlasoma trimaculatum, could only be identified using DNA barcoding. Family Cyprinidae had the greatest diversity, 50.00%. The diversity, richness and evenness indices ranged from 0.43-0.65, 0.64-1.46, and 0.27-0.40, respectively, indicating that fish diversity at both sampling sites was relatively low. A comparison of the catch per unit effort (CPUE) with 3 different mesh sizes found that the 50 mm mesh size was the best (474.80 ± 171.56 g/100 m2/night), followed by the 70 mm (417.41 ± 176.24 g/100 m2/night) and 30 mm mesh sizes (327.88 ± 115.60 g/100 m2/night). These results indicate that DNA barcoding is a powerful tool for species identification. Our data can be used for planning the sustainable management of fisheries resources in the Mae Tam reservoir.