• Korean Journal of Plant Taxonomy
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• v.50 no.1
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• pp.8-16
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• 2020

Complete chloroplast genome sequences provide detailed information about any structural changes of the genome, instances of phylogenetic reconstruction, and molecular markers for fine-scale analyses. Recent developments of next-generation sequencing (NGS) tools have led to the rapid accumulation of genomic data, especially data pertaining to chloroplasts. Short reads deposited in public databases such as the Sequence Read Archive of the NCBI are open resources, and the corresponding chloroplast genomes are yet to be completed. The V. dilatatum complex in Korea consists of four morphologically similar species: V. dilatatum, V. erosum, V. japonicum, and V. wrightii. Previous molecular phylogenetic analyses based on several DNA regions did not resolve the relationship at the species level. In order to examine the level of variation of the chloroplast genome in the V. dilatatum complex, raw reads of V. dilatatum deposited in the NCBI database were used to reconstruct the whole chloroplast genome, with these results compared to the genomes of V. erosum, V. japonicum, and three other species in Viburnum. These comparative genomics results found no significant structural changes in Viburnum. The degree of interspecific variation among the species in the V. dilatatum complex is very low, suggesting that the species of the complex may have been differentiated recently. The species of the V. dilatatum complex share large unique deletions, providing evidence of close relationships among the species. A phylogenetic analysis of the entire genome of the Viburnum showed that V. dilatatum is a sister to one of two accessions of V. erosum, making V. erosum paraphyletic. Given that the overall degree of variation among the species in the V. dilatatum complex is low, the chloroplast genome may not provide a phylogenetic signal pertaining to relationships among the species.

• Journal of the Institute of Electronics Engineers of Korea SP
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• v.46 no.5
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• pp.1-7
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• 2009

In recent years, compressed sensing (CS) algorithm has been studied in various research areas including medical imaging. To use the CS algorithm, the signal that is to be reconstructed needs to have the property of sparsity But, most medical images generally don't have this property. One method to overcome this problem is by using sparsifying transform. However, MR imaging, compared to other medical imaging modality, has the unique property that by using appropriate image acquisition pulse sequences, the image contrast can be modified. In this paper, we propose the possibility of applying the CS algorithm with non-sparsifying transform to the pulse sequence modified MR images and improve the reconstruction performance of the CS algorithm by using an appropriate sparsifying transform. We verified the proposed contents by computer simulation using Shepp-Logan phantom and in vivo data.

• Journal of Sensor Science and Technology
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• v.5 no.5
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• pp.11-20
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• 1996

In this paper, the characteristics of therapy radiation diode sensors have been studied by using therapy radiation from the MM22 microtron accelerator. The linearity, reproducibility and error ratio were measured for feasibility as a radiation detector. Energy dependence, sensitivity change after a amount of irradiation and output value according to a number of diodes were also measured for same purpose. We have formed pulse shaping of diode signal with nuclear instruments for portal image reconstruction. The percent depth dose ratio according to field size and depth was compared with that of the detector of a ion chamber. Using thirteen silicon diodes, we can directly read diode outputs on a computer monitor after A/D conversion with 16 channels analog to digital conversion board with 12 bit resolution. The possibility for portal image with diodes has been suggested from output comparison between output value with a human phantom and that without a human phantom.

• The KIPS Transactions:PartB
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• v.14B no.6
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• pp.407-412
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• 2007

The performance of ultrasonic testing systems for industrial or medical purpose largely depends on the performance of ultrasonic transducers. Generally, the information about an ultrasonic transducer performance characteristics are expressed by the ultrasonic R/F signal back from a reflector and its frequency characteristics in the data sheet provided by manufacturers. In case of focused ultrasonic transducers, the two pieces of information can, however, hardly assure that the focused ultrasonic transducer would produce well-focused C-scan images. Therefore, we propose the measured size of focal spot and the reconstructed shape of effective focal zone in the focused sound field as novel measures for the performance evaluation of the focused ultrasonic transducers. The process of getting the both measures of the transducers is conducted by the implemented software including sound field scanning and virtual 3D reconstruction functions which requires the echo of a point reflector. The proposed method could, otherwise impossible in the existing method, effectively and simply distinguish superior ones among many transducers made in the same specification and be also used to detect the performance degradation due to the aging of the transducers. Eventually, the quality of performance of the ultrasonic testing systems for industrial or medical purpose is secured.

• Korean Journal of Poultry Science
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• v.27 no.2
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• pp.155-161
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• 2000

Unfortunately, there is no technique which is stable and repetitive to produce transgenic chicken, although various ways of gene transfer including PGC-and embryonic cell-mediated gene transfer, DNA microinjection, virus inoculation and sperm cells have been employed. The aims of this study were 세 develop and establish such a stable, repetitive and efficient way of gene transfer giving a faithful gene expression during development after the reconstruction of embryo in an UV-irradiated egg. A dual reporter plasmid (pJJ9), a fusion gene containing lacZ and GFP driven by a CMV promoter was used to exploit either merits of both reporting markers. lacZ with strong signal or GFP with vital marking. Electroporated embryonic blastodermal cells (EBCs) in the presence of the pJJ9 DNA faithfully showed 377 bp PCR product and lacZ or GFP expressions in the identical cells in vitro of in vivo. Furthermore, analyses of expression pattern of the foreign DNA demonstrated that microinjected EBCs cells into the UV-irradiated recipient egg should participate in normal developmental process, for example, proliferation and differentiation into various tissues. Thirty percentages of the manipulated eggs showed lacZ expression in their tissues. These results together with the specific procedures used in this study should facilitate avian transgenesis.

• Journal of Korea Multimedia Society
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• v.5 no.4
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• pp.426-433
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• 2002

In this paper, we have studied the images which have been reconstructed by using combination of images acquired by the variation of operating frequency. When inner images have been reconstructed, they have been superposed by the surface state effect. In this case, the images of the phase object can be enhanced by the contrast of inner images. In this experiment, there are two kinds of specimens, one is a reference block haying 1/4T, 1/2T, 3/4T side drilled holes as main run piping material 111 the steam generator in NPP(Neuclear Power Plant)s and the another is a part of a hemisphere type specimen having about 1-2㎜ distance gap. It has been shown that the two results of defect shapes have better than before in this processing and phase contrast grow about twice. And we have constructed the acoustic microscope by using a quadrature detector that enables to acquire the amplitude and phase of the reflected signal simultaneously Further more ore have studied the reconstruction method of the amplitude and phase images and the enhancement method of the defect images contrast.

• Current Optics and Photonics
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• v.4 no.4
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• pp.286-292
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• 2020

Imaging through multicore fiber (MCF) is of great significance in the biomedical domain. Although several techniques have been developed to image an object from a signal passing through MCF, these methods are strongly dependent on the surroundings, such as vibration and the temperature fluctuation of the fiber's environment. In this paper, we apply a new, strong technique called deep learning to reconstruct the phase image through a MCF in which each core is multimode. To evaluate the network, we employ the binary cross-entropy as the loss function of a convolutional neural network (CNN) with improved U-net structure. The high-quality reconstruction of input objects upon spatial light modulation (SLM) can be realized from the speckle patterns of intensity that contain the information about the objects. Moreover, we study the effect of MCF length on image recovery. It is shown that the shorter the fiber, the better the imaging quality. Based on our findings, MCF may have applications in fields such as endoscopic imaging and optical communication.

• Journal of Broadcast Engineering
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• v.26 no.2
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• pp.143-154
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• 2021

In this paper, we propose a method of compressing digital hologram standardized data provided by JPEG Pleno. In numerical reconstruction of digital holograms, the addition of random phases for visualization reduces speckle noise due to interference and doubles the compression efficiency of holograms. Holograms are composed of completely complex floating point data, and due to ultra-high resolution and speckle noise, it is essential to develop a compression technology tailored to the characteristics of the hologram. First, frequency characteristics of hologram data are analyzed using various wavelet filters to analyze energy concentration according to filter types. Second, we introduce the subband selection algorithm using energy concentration. Finally, the JPEG2000, SPIHT, H.264 results using the Daubechies 9/7 wavelet filter of JPEG2000 and the proposed method are used to compress and restore, and the efficiency is analyzed through quantitative quality evaluation compared to the compression rate.

• Journal of the Korea Institute of Information and Communication Engineering
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• v.25 no.8
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• pp.1039-1045
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• 2021

In modern society, due to the influence of the 4th industrial revolution, camera sensors and image-based automation systems are being used in various fields, and interest in image and signal processing is increasing. In this paper, we propose a digital filter algorithm for image reconstruction in an impulse noise environment. The proposed algorithm divides the image into eight masks in vertical, horizontal, and diagonal directions based on the local mask set in the image, and compares the standard deviation of each segmentation mask to obtain a reference value. The final output is calculated by applying the weight according to the spatial distance and the weight using the reference value to the local mask. To evaluate the performance of the proposed algorithm, it was simulated with the existing algorithm, and the performance was compared using enlarged images and PSNR.

• Nuclear Engineering and Technology
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• v.53 no.4
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• pp.1189-1198
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• 2021

When performing remote tasks using robots in nuclear power plants, a 3D shape measurement system is advantageous in improving the efficiency of remote operations by easily identifying the current state of the target object for example, size, shape, and distance information. Nuclear power plants have high-radiation and underwater environments therefore the electronic parts that comprise 3D shape measurement systems are prone to degradation and thus cannot be used for a long period of time. Also, given the refraction caused by a medium change in the underwater environment, optical design constraints and calibration methods for them are required. The present study proposed a method for developing an underwater 3D shape measurement system with improved radiation tolerance, which is composed of commercial electric parts and a stereo camera while being capable of easily and readily correcting underwater refraction. In an effort to improve its radiation tolerance, the number of parts that are exposed to a radiation environment was minimized to include only necessary components, such as a line beam laser, a motor to rotate the line beam laser, and a stereo camera. Given that a signal processing circuit and control circuit of the camera is susceptible to radiation, an image sensor and lens of the camera were separated from its main body to improve radiation tolerance. The prototype developed in the present study was made of commercial electric parts, and thus it was possible to improve the overall radiation tolerance at a relatively low cost. Also, it was easy to manufacture because there are few constraints for optical design.