• Journal of Species Research
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• v.12 no.2
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• pp.158-164
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• 2023

In March 2021, marine sediment from East Sea samples were suspended in a 2% NaCl solution, and serial dilution was performed in fresh marine and Reasoner's 2A agar. Isolated bacterial strains were identified based on 16S rRNA gene sequences, and showed at least 98.7% sequence similarity with previously reported bacterial species. Finally, seven bacterial strains which were validly published but not reported in Korea, were obtained. These isolates were allocated to the orders Bacillales and Flavobacteriales. The three Flavobacteriales strains are classified into the family Flavobacteriaceae. The other four Bacillales belong to the families Bacillaceae and Paenibacillaceae. The seven unrecorded bacterial strains in this study are classified into seven different genera, which are assigned to Mesobacillus, Paenibacillus, Gramella, Gillisia, Arenibacter, Fictibacillus, and Brevibacillus. During the investigation, the possibility of excavation of various unrecorded species in domestic marine sediment was confirmed. Gram-staining, cell morphology, physiological and basic biochemical characteristics, and phylogenetic analysis were performed in this study and provided in the description of each strain.

• Mycobiology
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• v.50 no.4
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• pp.203-212
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• 2022

Fungi act as important decomposers in the forest environment. They recycle essential nutrients, promote plant growth through mycorrhizal relationships, and act as food for small animals. Samples of 265 indigenous fungal species were collected from Mudeungsan National Park in 2020. These species were identified based on morphological, molecular, and phylogenetic analyses using the internal transcribed spacer (ITS), nuclear large subunit rRNA (LSU), and RNA polymerase II second largest subunit (rpb2) regions. Subsequently, seven species were identified as unrecorded species in Korea: Cordyceps cicadae, Dentocorticium bicolor, Hymenochaete nanospora, Physisporinus crataegi, Rigidoporus piceicola, Russula raoultii, and Scutellinia crinita. This study reveals their detailed macro- and microscopic morphological characteristics with phylogenetic trees to report them as unrecorded species in Korea.

• Journal of Species Research
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• v.13 no.2
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• pp.111-126
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• 2024

Korean bamboo forests encompass 22,067 hectares and are dominated by Phyllostachys species. These forests serve as vital ecosystems, providing nourishment and habitat for diverse flora, fauna, and microorganisms. Among these inhabitants, various fungal species have been documented worldwide, displaying ecological roles as saprobes, parasites, and symbionts within or outside the bamboo host. However, a comprehensive study of bambusicolous fungi within the Korean bamboo ecosystem remains a critical gap in our knowledge. In this study, we conducted an extensive survey of bamboo materials collected from various bamboo forests and subsequently undertook fungal isolation. Primary identification of bambusicolous fungi was achieved through analysis of the internal transcribed spacer (ITS) region. As a result, we identified seven previously unrecorded bambusicolous fungal species (Fusarium bambusarum, Fusicolla violacea, Macroconia gigas, Neopestalotiopsis camelliae-oleiferae, Neopestalotiopsis iberica, Neopestalotiopsis longiappendiculata, and Thyridium punctulatum). Phylogenetic analysis using protein-coding genes appropriate for each taxon and morphological observation were conducted to ensure accurate identification. This study contributes to our understanding of fungal diversity within bamboo forests in Korea.

• The Korean Journal of Mycology
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• v.51 no.4
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• pp.471-490
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• 2023

Soil is a rich source of saprobic and pathogenic fungi in crop cultivation areas. Compared with that of the fruit trees, scarce information is available regarding the fungi present in orchard soils in Korea. We sampled rhizosphere soils of apple and pear trees from several orchards in Cheongju, Anseong, and Cheonan, Korea. During the processing of soil fungi, seven unrecorded species of the phylum Ascomycota were isolated. These included Acrocalymma walkeri, Clonostachys krabiensis, Coniella vitis, Cosmospora diminuta, Lasiobolidium spirale, Penicillium vallebormidaense, and Pseudothielavia arxii. All the species were identified and described based on morphological characteristics and molecular analysis of the ITS1-5.8S-ITS2 region and the large subunit of nuclear ribosomal RNA gene and partial β-tubulin gene (BenA) sequences. Descriptions and illustrations of the morphological characteristics are provided.

• Journal of Species Research
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• v.7 no.1
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• pp.60-72
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• 2018

Our study aimed to discover indigenous prokaryotic species in Korea. A total of 29 bacterial species in the phylum Proteobacteria were isolated from freshwater and sediment of rivers and brackish zones in Korea. From the high 16S rRNA gene sequence similarity (${\geq}98.8%$) and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to an independent and predefined bacterial species. To our knowledge, there is no official report or publication that has previously described these 29 species in Korea. Specifically, we identified 10, 12, and seven species of eight, 12, and seven genera that belong to classes Alphaproteobacteria, Betaproteobacteria, and Gammaproteobacteria, respectively; all are reported as previously unrecorded bacterial species in Korea. The Gram reaction, colony and cell morphology, basic biochemical characteristics, isolation source, and strain IDs for each are also described.

• Animal Systematics, Evolution and Diversity
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• v.31 no.4
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• pp.296-303
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• 2015

We surveyed moths on Gageodo island in the southwestern sea of the Korean Peninsula over three years (2009, 2012, 2013) and found a total of 253 species in 18 families. Geometridae had the greatest species richness, with 63 species, followed by Noctuidae, Erebidae, Crambidae and Sphingidae. The annual changes in species richness and abundance were not different and seasonal occurrence of species showed a unimodal pattern in which the numbers of species and individuals increased from April and May, peaked in June and decreased to September and October. Seven moth species (Pyralidae: Herculia drabicilialis Yamanaka, Didia striatella (Inoue); Crambidae: Clupeosoma pryeri (Butler), Demobotys pervulgalis (Hampson), Yezobotys dissimilis (Yamanaka), Syllepte cissalis Yamanaka; Erebidae: Hypena sinuosa (Wileman)) are reported for the first time in Korea.

• The Korean Journal of Mycology
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• v.51 no.4
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• pp.287-306
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• 2023

According to our previous study, 500 species of yeast exist in Korea, including nine variants comprising 142 genera and 48 classes in two phyla. Additionally, 4,483 fungal species have been documented at the National Institute of Biological Resources (NIBR). However, despite the industrial use of several yeasts, only 173 species formed part of the National Species List of Korea (NSLK) as of December 2021, mainly due to the lack of taxonomic descriptions. This study aimed to investigate the taxonomy of seven newly isolated yeast species (Hyphopichia burtonii, Starmerella sorbosivorans, Cyberlindnera mycetangii, Cutaneotrichosporon oleaginosum, Nakazawaea ernobii, Pichia kudriavzevii, and Schizosaccharomyces japonicus) for inclusion in the NSLK. The strains were clustered for the phylogenetic analysis of fungal rDNA (D1/D2-26S) sequences. This study provides descriptions of their cell morphology and physiological characteristics, the results of which confirm the indigenous origin of these seven species in Korea and recommend their inclusion in the NSLK.

• Korean Journal of Environmental Biology
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• v.36 no.3
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• pp.260-270
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• 2018

A study describing unrecorded and taxonomically undescribed indigenous species is in progress since 2006. Samples were collected from many sites in coastal waters and offshore of Korea as well as from Jeju Island. Since 2008, we have found ten unrecorded species of four genera belonging to family Dinophysaceae, Gonyaulacaceae, Gymnodiniaceae, and Heterocapsaceae. The species are as follows, Dinophysis elongata (2016 winter), D. nasuta (2016 winter), Gonyaulax alaskensis (2016 winter), G. diegensis (2017), G. monospina (2008), Amphidinium flagellans(2017), Heterocapsa circularisquama (2017), H. horiguchii (2017), H. lanceolata (2017), and H. pygmaea (2017) (note; The numbers in the parenthesis refer to the year in which the species was reported as unrecorded indigenous species by National Institute of Biological Resources, NIBR hereafter). Among them, seven species were described as newly recorded species in Korean waters, and three have been re-described in this study.

• Korean Journal of Environmental Biology
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• v.36 no.3
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• pp.291-298
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• 2018

Samples were collected from benthic and subaerophytic habitats of fresh and brackish water in Korea from April 2017 to April 2018. Accordingly, three genera and seven species were newly recorded in Korea. Three unrecorded genera were Cephalothrix, Cyanophanon and Toxifilum, and seven species were Anagnostidinema pseudacutissimum, Calothrix elenkinii, Cephalothrix komarekiana, Cyanophanon mirabile, Cyanosarcina chroococcoides, Leptolyngbya ectocarpi and Toxifilum mysidocida. Anagnostidinema pseudacutissimum and Cephalothrix komarekiana had been previously reported to inhabit freshwater, but these were found to be present in brackish water during the period of the present study. Also, Cyanosarcina chroococcoides previously reported to inhabit moorland waters and swamps, were found to be present in subaerophytic habitat.

• Korean Journal of Environmental Biology
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• v.38 no.2
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• pp.289-298
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• 2020

As part of the research program "2018 Rapid screening and identification of freshwater microorganisms using MALDI-TOF/MS library" freshwater samples were collected from a branch of the Nakdong River. Almost 300 antibiotic-resistant bacterial strains were isolated from freshwater samples and subsequently identified by 16S rRNA gene sequencing. Seventeen strains among the isolates shared high 16S rRNA gene sequence similarity (>99.0%) with known species that were not previously recorded in Korea, and each of the isolates also formed a robust phylogenetic clade with the closest species. These species were phylogenetically diverse, belonging to four phyla, seven classes, 10 orders, and 13 genera. At the genus and class level, the previously unrecorded species belonged to Rhodovarius, Xanthobacter, and Shinella of the class Alphaproteobacteria; Ottowia, Simplicispira, and Zoogloea of Betaproteobacteria; Pseudomonas, Acinetobacter, and Shewanella of Gammaproteobacteria; Arcobacter of Epsilonproteobacteria; Sphingobacterium of Sphingobacteriia; Trichococcus of Bacilli; and Leucobacter of Actinobacteria. The previously unrecorded species were further characterized by examining their gram-staining, colony and cell morphology, biochemical properties, and phylogenetic position.