• Title/Summary/Keyword: sequence length

검색결과 1,234건 처리시간 0.034초

노각나무(Stewartia koreana, 차나무과)의 분류학적 재검토 (Taxonomic review of the Stewartia koreana Nakai ex Rehder (Theacease))

  • 권혜진;송호경;김무열
    • 식물분류학회지
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    • 제38권3호
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    • pp.233-250
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    • 2008
  • 한국 특산종인 노각나무(Stewartia koreana Nakai ex Rehder)의 분류학적 위치를 재검토하기 위해, 노각나무와 근연 분류군의 외부형태와 ITS 염기서열을 조사하였다. 노각나무는 일본에 분포하는 S. pseudocamellia와 외부 형태적으로 매우 유사하였으나, 노각나무는 잎이 대형이고 소화경의 길이가 2.5 cm 이상인 점에서 S. pseudocamellia와 구별되었다. ITS 염기서열을 분석한 결과 노각나무는 S. pseudocamellia와 별개의 분계조를 형성하였다. 따라서 외부형태 및 ITS 염기서열 결과는 노각나무가 S. pseudocamellia와 다른 별개의 한국 특산종임을 지지해 주었다.

Isolation of a Medium Chain Length Polyhydroxyalkanoic Acids Degrading Bacterium, Janthinobacterium lividum

  • Park, Jin-Seo;Park, Jeong-Youl;Joung, Pil-Mun;Park, Seong-Joo;Rhee, Young-Ha;Shin, Kwang-Soo
    • Journal of Microbiology
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    • 제39권2호
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    • pp.139-141
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    • 2001
  • Medium-chain length polyhydrexyalkanoic acids (MCL-PHAs) degrading bacterium was isolated from the soil. The bacterium was identified as Janthinobacterium lividum by its biochemical properties, cell membrane fatty acids composition, and 16S rDNA sequence analysis. The bacterium showed a similarity of 0.911 with J. lividum according to the cell membrane fatty acids analysis and a similarity of 97% in the 16S rDNA requence analysis. Culture supernatant of the bacterium skewed the highest depolymerase activity toward polyhydroxynonanoic acid (PHN) that did not degrade the poly-$\beta$-hydroxybutyric acid (PHB). The esterase activity was also detected with p-nitrophenyl (PNP) esters of fatty acids such as PNP-dodecanoic PNP-dodecanoic acid, PNP-decanoic acid, and PNP-hexanoic acid.

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교통난 계측 I-초음파용 공간필터법에 의하여- (A Measurement of Traffic Vehicles Flow by the Ultrasonic Spatial Filtering Method)

  • 전승환
    • 한국항해학회지
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    • 제20권2호
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    • pp.51-58
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    • 1996
  • For the smooth flow of traffic vehicles and its effective management, it is necessary to have an exact information on traffic condition, i.e., the volume of traffic, velocity, occupancy and classification of vehicles. In particular, for classification of vehicles, there has been only image processing method using camera, where the method can obtain much information but rather expensive. In this paper, an algorithm for the measurement of velocity and total length of vehicles has been proposed to develop a general traffic management system, which is necessary to discriminate the class of vehicles. In order to realize the proposed algorithm, we have developed an ultrasonic spatial filtering method, which has better performance than that of using the traditional vehicle detector. To have this system to be constructed, we have introduced three sets of ultrasonic devices where each has one transmitter and two receivers which are arranged to obtain the spatial difference of objects. The velocity of vehicles can be measured by analyzing the occurrence time of pulses and their time differences. The total length of vehicles can be given by multiplying velocity with time interval of pulses sequence. To confirm the effectiveness of this measuring system, the experiment by the spatial filtering method using the ultrasonic sensors has been carried out. As the results, it is found that the proposed method can be used as one of measurement tools in the general traffic management system.

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순환 신경망에서 LSTM 블록을 사용한 영어와 한국어의 시편 생성기 비교 (Psalm Text Generator Comparison Between English and Korean Using LSTM Blocks in a Recurrent Neural Network)

  • 에런 스노버거;이충호
    • 한국정보통신학회:학술대회논문집
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    • 한국정보통신학회 2022년도 추계학술대회
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    • pp.269-271
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    • 2022
  • 최근 몇 년 동안 LSTM 블록이 있는 RNN 네트워크는 순차적 데이터를 처리하는 기계 학습 작업에 광범위하게 사용되어왔다. 이러한 네트워크는 주어진 시퀀스에서 가능성이 다음으로 가장 높은 단어를 기존 신경망보다 더 정확하게 예측할 수 있기 때문에 순차적 언어 처리 작업에서 특히 우수한 것으로 입증되었다. 이 연구는 영어와 한국어로 된 150개의 성경 시편에 대한 세 가지 다른 번역에 대해 RNN/LSTM 신경망을 훈련하였다. 그런 다음 결과 모델에 입력 단어와 길이 번호를 제공하여 훈련 중에 인식한 패턴을 기반으로 원하는 길이의 새 시편을 자동으로 생성하였다. 영어 텍스트와 한국어 텍스트에 대한 네트워크 훈련 결과를 상호 비교하고 개선할 점을 기술한다.

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Pathogenicity of infectious in vitro transcripts and comparison of RNA3 of Alfalfa mosaic virus Korean isolates

  • J.H. Ha;Park, J.K.;K.H. Ryu
    • 한국식물병리학회:학술대회논문집
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    • 한국식물병리학회 2003년도 정기총회 및 추계학술발표회
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    • pp.146.2-147
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    • 2003
  • Two Korean isolates of Alfalfa mosaic virus (AHV-AZ, AMV-KR) were isolated from azuki bean and potato plants, respectively, and their pathologies were confirmed on some susceptible host plants including pepper, tobacco and red bean plants. Full length cDNAs to RNA1, RNA2 and RNA3 of the two Korean strains were amplified using the long-template reverse transcription (RT)-polymerase chain reaction (PCR) method. RT-PCR products covering entire regions for the three AMV genome RNAs were cloned. RNA transcripts were synthesized in vitro from each clones using T7 RNA polymerase and infectivity test was peformed in 9 reassortment sets of transcripts. All the combinations of reassorted transcripts were found to be infectious when inoculated onto Nicotiana benthamiana plants, and were not distinguishable to those of wild types. The full-length cDNA clones that were confirmed infectious were sequenced their nucleotide sequences. We will discuss sequence analysis of the two Korean isolates of AMV genomic RNA3 and compare reported foreign isolates of AMV.

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Channel estimation and detection with space-time transmission scheme in colocated multiple-input and multiple-output system

  • Pratibha Rani;Arti M.K.;Pradeep Kumar Dimri
    • ETRI Journal
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    • 제45권6호
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    • pp.952-962
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    • 2023
  • In this study, a space-time transmission scheme is proposed to tackle the limitations of channel estimation with orthogonal pilot information in colocated multiple-input multiple-output systems with several transmitting and receiving antennas. Channel information is obtained using orthogonal pilots. Channel estimation introduces pilot heads required to estimate a channel. This leads to bandwidth insufficiency. As a result, trade-offs exist between the number of pilots required to estimate a channel versus spectral efficiency. The detection of data symbols is performed using the maximum likelihood decoding method as it provides a consistent approach to parameter estimation problems. The moment-generating function of the instantaneous signal-to-noise ratio is used to drive an approximate expression of the symbol error rate for the proposed scheme. Furthermore, the order of diversity is less by one than the number of receiver antennas used in the proposed scheme. The effect of the length of a pilot sequence on the proposed scheme's performance is also investigated.

핵치환에 의한 cloning, stem cell, 그리고 효소 telomerase (Mammalian Cloning by Nuclear transfer, Stem Cell, and Enzyme Telomerase)

  • 한창열
    • 식물조직배양학회지
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    • 제27권6호
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    • pp.423-428
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    • 2000
  • In 1997 when cloned sheep Dolly and soon after Polly were born, it had become head-line news because in the former the nucleus that gave rise to the lamb came from cells of six-year-old adult sheep and in the latter case a foreign gene was inserted into the donor nucleus to make the cloned sheep produce human protein, factor IX, in e milk. In the last few years, once the realm of science fiction, cloned mammals especially in livestock have become almost commonplace. What the press accounts often fail to convey, however, is that behind every success lie hundreds of failures. Many of the nuclear-transferred egg cells fail to undergo normal cell divisions. Even when an embryo does successfully implant in the womb, pregnancy often ends in miscarriage. A significant fraction of the animals that are born die shortly after birth and some of those that survived have serious developmental abnormalities. Efficiency remains at less than one % out of some hundred attempts to clone an animal. These facts show that something is fundamentally wrong and enormous hurdles must be overcome before cloning becomes practical. Cloning researchers now tent to put aside their effort to create live animals in order to probe the fundamental questions on cell biology including stem cells, the questions of whether the hereditary material in the nucleus of each cell remains intact throughout development, and how transferred nucleus is reprogrammed exactly like the zygotic nucleus. Stem cells are defined as those cells which can divide to produce a daughter cell like themselves (self-renewal) as well as a daughter cell that will give rise to specific differentiated cells (cell-differentiation). Multicellular organisms are formed from a single totipotent stem cell commonly called fertilized egg or zygote. As this cell and its progeny undergo cell divisions the potency of the stem cells in each tissue and organ become gradually restricted in the order of totipotent, pluripotent, and multipotent. The differentiation potential of multipotent stem cells in each tissue has been thought to be limited to cell lineages present in the organ from which they were derived. Recent studies, however, revealed that multipotent stem cells derived from adult tissues have much wider differentiation potential than was previously thought. These cells can differentiate into developmentally unrelated cell types, such as nerve stem cell into blood cells or muscle stem cell into brain cells. Neural stem cells isolated from the adult forebrain were recently shown to be capable of repopulating the hematopoietic system and produce blood cells in irradiated condition. In plants although the term$\boxDr$ stem cell$\boxUl$is not used, some cells in the second layer of tunica at the apical meristem of shoot, some nucellar cells surrounding the embryo sac, and initial cells of adventive buds are considered to be equivalent to the totipotent stem cells of mammals. The telomere ends of linear eukaryotic chromosomes cannot be replicated because the RNA primer at the end of a completed lagging strand cannot be replaced with DNA, causing 5' end gap. A chromosome would be shortened by the length of RNA primer with every cycle of DNA replication and cell division. Essential genes located near the ends of chromosomes would inevitably be deleted by end-shortening, thereby killing the descendants of the original cells. Telomeric DNA has an unusual sequence consisting of up to 1,000 or more tandem repeat of a simple sequence. For example, chromosome of mammal including human has the repeating telomeric sequence of TTAGGG and that of higher plant is TTTAGGG. This non-genic tandem repeat prevents the death of cell despite the continued shortening of chromosome length. In contrast with the somatic cells germ line cells have the mechanism to fill-up the 5' end gap of telomere, thus maintaining the original length of chromosome. Cem line cells exhibit active enzyme telomerase which functions to maintain the stable length of telomere. Some of the cloned animals are reported prematurely getting old. It has to be ascertained whether the multipotent stem cells in the tissues of adult mammals have the original telomeres or shortened telomeres.

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일품벼/모로베레칸 이입계통을 이용한 농업형질 관련 QTL 분석 (Mapping QTLs for Agronomic Traits Using an Introgressin Line Population from a Cross between Ilpumbyeo and Moroberekan in Rice)

  • 구홍광;김동민;강주원;김명기;김연규;안상낙
    • 한국육종학회지
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    • 제40권4호
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    • pp.414-421
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    • 2008
  • We conducted a QTL analysis of agronomic traits using 117 $BC_3F_5$ and $BC_3F_6$ lines developed from a cross between Ilpumbyeo and Moroberekan. Genotypes of 117 $BC_3F_5$ lines were determined using 134 simple sequence repeat (SSR) markers. A total of 832 Moroberekan chromosome segments with 410 homozygous and 422 heterozygous, respectively, were detected, and the genetic distance of introgression segments ranged from 0.5 cm to 112.1 cm. A linkage map constructed using 134 SSR markers was employed to characterize quantitative trait loci (QTL). The 117 $BC_3F_5$ and $BC_3F_6$ lines were evaluated for seven agronomic traits at two locations in 2006 and 2007 and at one location in 2007. A total of 26 QTLs were identified for seven traits including days to heading, and the phenotypic variance explained by each QTL ranged from 9.2% to 24.2%. Moroberekan alleles contributed positive effects in the Ilpumbyeo background at eleven QTL loci including panicle length and spikelets per panicle. Five QTLs, two for days to heading and one each for culm length, panicle length and spikelets per panicle were consistently detected in every occasions indicating that these QTLs are stable. Among them, two QTLs, spp6 for spikelets per panicle and pl6 for paniclel length were localized in the similar region. Increase in spikelets per panicle at this locus might be due to the increase in panicle length, because both traits were associated with increase in spikelets per panicle and panicle length due to the presence of the Moroberekan allele. These Moroberekan QTLs might be useful in breeding programs to develop high-yielding cultivars.

A New Species of Eudactylopus (Copepoda: Harpacticoida) from the South Coast of Korea Based on Morphological and Molecular Evidence

  • Cho, Dae Hyun;Wi, Jin Hee;Suh, Hae-Lip
    • Animal Systematics, Evolution and Diversity
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    • 제34권3호
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    • pp.127-142
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    • 2018
  • A new species of Eudactylopus Scott A., 1909 is described from the southern coast of Korea. The specimens were collected using a light trap set overnight at the entrance near a pier. Eudactylopus yokjidoensis n. sp. is similar to E. andrewi Sewell, 1940 and E. spectabilis (Brian, 1923) in two key respects: similar length of proximal and distal inner setae on female P2 enp-2, and modification of two subapical setae on male P2 endopod. However, E. yokjidoensis can be differentiated from the two species by following morphological characteristics: in females, the length ratio of cephalothorax/2nd-4th thoracic somites combined is smaller in E. yokjidoensis than other two species (1 : 0.8 vs. 1 : 1); antennule has nine segments (vs. 7-segmented in E. andrewi); P2 to P4 each bears a process in medial distal margin of basis, while it is just smooth in E. spectabilis; in males; the length ratio of cephalothorax to 2nd-4th thoracic somites combined is smaller in E. yokjidoensis than other two species (1 : 0.6 vs. 1 : 1 in E. andrewi and 1 : 0.8 in E. spectabilis); and P5 exopod has a comb-like innermost seta, while it is bipinnate seta in E. spectabilis. To prove the Korean species of Eudactylopus to be new, full descriptions of both sexes are given here, and the claim is supported by distinct genetic differences between E. yokjidoensis and E. spectabilis (22.3-22.7%) in the mitochondrial gene cytochrome oxidase subunit I(mtCOI) sequence.

A Study on the Fundamental Cause of Stall Stagnation Phenomena in Surges in Compressor Systems

  • Yamaguchi, Nobuyuki
    • International Journal of Fluid Machinery and Systems
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    • 제10권2호
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    • pp.119-137
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    • 2017
  • Although the stall stagnation phenomena have often been experienced in site and also analytically in numerical experiments in surges in systems of compressors and flow paths, the fundamental causes have not been identified yet. In order to clarify the situations, behaviours of infinitesimal disturbance waves superposed on a main flow were studied in a simplified one-dimensional flow model. A ratio of the amplifying rate of the system instability to the characteristic slope of the compressor element was surveyed as the instability enhancement factor. Numerical calculations have shown the following tendency of the factor. In the situation where both the sectional area ratio and the length ratio of the delivery flow-path to the suction duct are sufficiently large, the enhancement factors are greater in magnitude, which means occurrence of ordinary deep surges. However, in the situation where the area ratio and/or the length ratio is relatively smaller, the enhancement factor tends to lessen significantly, which situation tends to suppress deep surges for the same value of the characteristic slope. It could result in the stall stagnation condition. In the domain of area ratio vs. length ratio of the delivery duct to the suction duct, contour-lines of the enhancement factor behave qualitatively similar to those of the stall stagnation boundaries of a fan analytically obtained, suggesting that a certain range of the enhancement factor values could specify the stagnation occurrence. The significant decreases in the factors are observed to accompany appearances of phase lags and travelling waves in the wave motions, which macroscopically suggests breaking down of the complete surge actions of filling and emptying of the air in the delivery duct. The strength of the action is deeply related with acoustic interferences and is evaluated in terms of the volume-modified reduced resonance frequency proposed by the author. These observations have shown the fundamental cause and the sequence of the stall stagnation in principle.