• Title/Summary/Keyword: selectivity

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Spatial Selectivity Estimation using Cumulative Wavelet Histograms (누적밀도 웨이블릿 히스토그램을 이용한 공간 선택율 추정)

  • Chi, Jeong-Hee;Jeong, Jae-Hyuk;Ryu, Keun-Ho
    • Journal of KIISE:Databases
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    • v.32 no.5
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    • pp.547-557
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    • 2005
  • The purpose of selectivity estimation is to maintain the summary data in a very small memory space and to minimize the error of estimated value and query result. In case of estimating selectivity for large spatial data, the existing works need summary information which reflect spatial data distribution well to get the exact result for query. In order to get such summary information, they require a much memory space. Therefore In this paper, we propose a new technique cumulative density wavelet Histogram, called CDW Histogram, which gets a high accurate selectivity in small memory space. The proposed method is to utilize the sub-histograms created by CD histogram. The each sub-histograms are used to generate the wavelet summary information by applying the wavelet transform. This fact gives us good selectivity even if the memory sire is very small. The experimental results show that the proposed method simultaneously takes full advantage of their strong points - gets a good selectivity using the previous histogram in ($25\%\~50\%$) memory space and is superior to the existing selectivity estimation techniques. The proposed technique can be used to accurately quantify the selectivity of the spatial range query in databases which have very restrictive memory.

Descriptor-Based Profile Analysis of Kinase Inhibitors to Predict Inhibitory Activity and to Grasp Kinase Selectivity

  • Park, Hyejin;Kim, Kyeung Kyu;Kim, ChangHoon;Shin, Jae-Min;No, Kyoung Tai
    • Bulletin of the Korean Chemical Society
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    • v.34 no.9
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    • pp.2680-2684
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    • 2013
  • Protein kinases (PKs) are an important source of drug targets, especially in oncology. With 500 or more kinases in the human genome and only few kinase inhibitors approved, kinase inhibitor discovery is becoming more and more valuable. Because the discovery of kinase inhibitors with an increased selectivity is an important therapeutic concept, many researchers have been trying to address this issue with various methodologies. Although many attempts to predict the activity and selectivity of kinase inhibitors have been made, the issue of selectivity has not yet been resolved. Here, we studied kinase selectivity by generating predictive models and analyzing their descriptors by using kinase-profiling data. The 5-fold cross-validation accuracies for the 51 models were between 72.4% and 93.7% and the ROC values for all the 51 models were over 0.7. The phylogenetic tree based on the descriptor distance is quite different from that generated on the basis of sequence alignment.

Development of a Hearing Impairment Simulator considering Frequency Selectivity of the Hearing Impaired (난청인의 주파수 선택도를 고려한 난청 시뮬레이터 개발)

  • Joo, S.I.;Kil, S.K.;Goh, M.S.;Lee, S.M.
    • Journal of Biomedical Engineering Research
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    • v.30 no.1
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    • pp.94-102
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    • 2009
  • In this paper, we propose a hearing impairment simulator considering reduced frequency selectivity of the hearing impaired, and verify it's performance through experiments. The reduced frequency selectivity was embodied by spectral smearing using linear prediction coding(LPC). The experiments are composed of 4 kinds of tests; pure tone test, speech reception threshold(SRT) test, and word recognition score(WRS) test without spectral smearing and with spectral smearing. The experiments of the hearing impairment simulator were performed with 9 subjects who have normal hearing. The amount of spectral smearing was controlled by LPC order. The percentile score of WRS test without smearing is $89.78{\pm}2.420%$. The scores of WRS with 24th LPC order and with 8th LPC order are $88.00{\pm}3.556%$ and $83.78{\pm}2.123%$ respectively. It is verified that WRS score is lowered by decreasing LPC order. This is a reasonable result considering that spectral smearing is getting heavier according to decreasing LPC order. It is confirmed that spectral smearing using LPC simulates the reduced frequency selectivity of the hearing impaired and affects the clearness of speech reception.

Studies on the Selectivity of the Herbicide Alachlor;II. A Metabolic Approach to Selectivity (제초제 Alachlor 의 선택성에 관한 연구;II. 대사론적 접근)

  • Hwang, Eul-Chul;Park, Chang-Kyu
    • Korean Journal of Environmental Agriculture
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    • v.13 no.2
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    • pp.209-215
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    • 1994
  • Absorption, translocation, and metabolism of the herbicide alachlor in soybean, Chinese cabbage, and barnyard grass seedlings were examined and compared with each other using [phenyl-U-$^{14}C$] alachlor in search of a primary factor contributing to the selectivity of alachlor. When root of each seedling was immersed into the solution containing [$^{14}C$]alachlor, the amount of absorbed radioactivity/mg dry matter of seedling which was suggested to be correlated with the susceptibility of plants to alachlor decreased in the order of soybean ${\gg}$ Chinese cabbage ${\geq}$ barnyard grass and the rate of translocation to shoot was Chinese cabbage ${\geq}$ barnyard grass ${\gg}$ soybean. These orders did not consistently explain the selective phytotoxicity of alachlor. Analyses of extracts by reverse phase chromatography showed that alachlor was detoxified by conjugation with glutathione in all three plants and the rate of glutathione conjugation of soybean, the resistant species to alachlor, was the greatest, while that of barnyard grass, the susceptible, was the lowest among three plants. This result explained well the selective phytotoxicity of alachlor. Both absorption and translocation contribute undoubtedly to the selectivity by influencing the active internal concentration of alachlor. However, neither of them appeared to be a primary factor. It was concluded that the most important primary factor was the rate of glutathione conjugation, which detoxifies alachlor and plays an important role in selectivity.

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Structure-Activity Relationships of Peptide Antibiotics with Improved Bacterial Cell Selectivity of Pseudin

  • Lee, Yeongjoon;Jeon, Dasom;Kim, Jin-Kyoung;Kim, Yangmee
    • Journal of the Korean Magnetic Resonance Society
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    • v.21 no.3
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    • pp.78-84
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    • 2017
  • Pseudin is a naturally occurring 24 amino-acid-residue antimicrobial peptide derived from the skin of paradoxical frog Pseud's paradoxa. It shows potency against the bacteria and antibiotic-resistant bacteria strain, but has high cytotoxicity against mammalian cell. In our previous study, substitution of $Pro^{11}$ for Gly (Ps-P) increased bacterial cell selectivity but decreased the antibacterial activity of pseudin. In this study, we designed pseudin analogue, Ps-4K-P with increased cationicity up to +7 in Ps-P by substituting Glu14, Gln10, Gln24, and Leu18 with Lys. Ps-4K-P showed improved potent antibacterial activity with high bacterial cell selectivity. We determined the tertiary structure of Ps-4K-P in the presence of DPC micelles by NMR spectroscopy and it has a hinge structure at $Pro^{11}$ followed by three turn helices from $Pro^{11}$ to $Val^{23}$ at the C-terminus. Amphipathicity with increased cationicity as well as helix-hinge-helix structural motif provided by introduction of a Pro at position $Gly^{11}$ are the crucial factors which confer antibacterial activity with bacterial cell selectivity to Ps-4K-P.

Histogram-based Selectivity Estimation Method in Spatio-Temporal Databases (시공간 데이터베이스를 위한 히스토그램 기반 선택도 추정 기법)

  • Lee Jong-Yun;Shin Byoung-Cheol
    • The KIPS Transactions:PartD
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    • v.12D no.1 s.97
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    • pp.43-50
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    • 2005
  • The Processing domains of spatio-temporal databases are divided into time-series databases for moving objects and sequence databases for discrete historical objects. Recently the selectivity estimation techniques for query optimization in spatio-temporal databases have been studied, but focused on query optimization in time-series databases. There wat no previous work on the selectivity estimation techniques for sequence databates as well. Therefore, we construct T-Minskew histogram for query optimization In sequence databases and propose a selectivity estimation method using the T-Minskew histogram. Furthermore we propose an effective histogram maintenance technique for food performance of the histogram.

High Selectivity Coupled Line Impedance Transformer with Second Harmonic Suppression

  • Kim, Phirun;Park, Junsik;Jeong, Junhyung;Jeong, Seungho;Chaudhary, Girdhari;Jeong, Yongchae
    • Journal of electromagnetic engineering and science
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    • v.16 no.1
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    • pp.13-18
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    • 2016
  • This paper presents a design of an impedance transformer (IT) with high frequency selectivity characteristics. The frequency selectivity can be controlled by even- and odd-mode impedance of a shunt coupled transmission line (TL). For experimental validation, a 50- to $20-{\Omega}$ IT was implemented at a center frequency ($f_0$) of 2.6 GHz for the long-term evolution signal. The measured results were in good agreement with the simulations, showing a return loss higher than 19 dB over a passband bandwidth of 0.63 GHz (2.28-2.91 GHz) and good sharp frequency selectivity characteristic near to the passband. The series coupled TL provides a transmission zero at 5.75 GHz, whereas the shunt coupled TL provides three transmission zeros located at 2 GHz, 3.1 GHz, and 7.14 GHz.

Selectivity of Gillnet for Neon Flying Squid, Ommastrephes bartrami (LeSueur) in the North Pacific

  • LEE Jang-Uk;AN Doo-Hae;BAIK Chul-In
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.30 no.6
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    • pp.916-922
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    • 1997
  • This paper attempted to estimate mesh selectivity of gill nets for neon flying squid in the north Pacific Ocean. The 11 linear regressions, (P<0.05) were obtained using the data on catch ratios derived from mesh size combinations between two slightly different mesh sizes of 12 kinds of research gillnet (namely 33, 37, 42, 48, 55, 63, 72. 76, 86, 96, 105 and 115 mm in stretched mesh size). There was an increase in the optimum length with the increase in mesh size but standard deviation showed somewhat increase with the increase in the mesh size. The selectivity curves were well fitted to the length frequency distributions obtained from samples for the mesh sizes from 48 mm through 86 mm. For the mesh sizes of 33, 37 and 42 mm the DML (Dorsal Mantle Length) compositions were distributed towards the right hand-limb of the curves. The DML distributions from the 96 mm and larger meshes showed a trend towards the left hand-limb of the curves. The selectivity curves for different mesh sizes indicate that large mesh sizes catch a greater size range of squid, and the gill net fishery in the north Pacific Ocean captures effectively neon flying squid within the range of $9\~43cm$ DML.

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Ammonium Ion Binding Property of Naphtho-Crown Ethers Containing Thiazole as Sub-Cyclic Unit

  • Kim, Hong-Seok;Do, Kyung-Soon;Kim, Ki-Soo;Shim, Jun-Ho;Cha, Geun-Sig;Nam, Hak-Hyun
    • Bulletin of the Korean Chemical Society
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    • v.25 no.10
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    • pp.1465-1470
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    • 2004
  • A short and efficient synthesis, solvent extraction and potentiometric measurements of new thiazole-containing naphtho-crown ethers are reported. The naphthalene moiety enhances the ammonium ion selectivity over potassium ion. The selectivity of ${NH_4}^+/K^+$ follows the trend $3\;{\approx}\;2\;>\;1$, indicating that the differences in conformational changes of 2 and 3 in forming ammonium complexes affect little on the resulting ammonium/potassium extraction selectivity ratio. The ammonium ion-selective electrodes were prepared with noctylphenyl ether plasticized poly(vinyl chloride) membranes containing 1-4 the effect of one naphthalene unit introduced on either right (2) or left (3) side of thiazolo-crown ether on their potentiometric properties (e.g., ammonium ion selectivity over other cations, response slopes, and detection limits) were not apparent. However, the ammonium ion selectivity of 1, 2 and 3 over other alkali metal and alkaline earth metal cations is 10-100 times higher than that of nonactin.

Artificial Metalloproteases with Broad Substrate Selectivity Constructed on Polystyrene

  • Ko, Eun-Hwa;Suh, Jung-Hun
    • Bulletin of the Korean Chemical Society
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    • v.25 no.12
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    • pp.1917-1923
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    • 2004
  • Although the proteolytic activity of the Cu(II) complex of cyclen (Cyc) is greatly enhanced upon attachment to a cross-linked polystyrene (PS), the Cu(II)Cyc-containing PS derivatives reported previously hydrolyzed only a very limited number of proteins. The PS-based artificial metalloproteases can overcome thermal, mechanical, and chemical instabilities of natural proteases, but the narrow substrate selectivity of the artificial metalloproteases limits their industrial application. In the present study, artificial metalloproteases exhibiting broad substrate selectivity were synthesized by attaching Cu(II)Cyc to a PS derivative using linkers with various structures in an attempt to facilitate the interaction of various protein substrates with the PS surface. The new artificial metalloproteases hydrolyzed all of the four protein substrates (albumin, myoglobin, ${\gamma}$-globulin, and lysozyme) examined, manifesting $k_{cat}/K_m$ values of 28-1500 $h_{-1}M_{-1}$ at 50 $^{\circ}C$. The improvement in substrate selectivity is attributed to steric and/or polar interaction between the bound protein and the PS surface as well as the hydrophobicity of the microenvironment of the catalytic centers.