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Genetic Variation in Wild and Cultured Populations of the Sea Squirt Halocynthia roretzi Inferred from Microsatellite DNA Analysis

  • Han, Hyon-Sob;Nam, Bo-Hye;Kang, Jung-Ha;Kim, Yi-Kyoung;Jee, Young-Ju;Hur, Young-Baek;Yoon, Moon-Geun
    • Fisheries and Aquatic Sciences
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    • v.15 no.2
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    • pp.151-155
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    • 2012
  • We used nine microsatellite DNA markers to estimate genetic variation among wild and cultured populations of the sea squirt Halocynthia roretzi. The loci were polymorphic, with 6-32 alleles, and allelic richness ranged from 6.0 to 26.1 in each population. The wild and the cultured populations had similar mean heterozygosities ($H_O$ and $H_E$), allele numbers, and allelic richness. One cultured population with softness syndrome had a lower mean in the observed heterozygosity ($H_O$ = 0.57) and higher mean inbreeding coefficient ($F_{IS}$ = 0.261) than any other populations. This suggests that the loss of genetic variation in the diseased population might be due to increased inbreeding. A neighbor-joining tree and pairwise population estimates of $F_{ST}$ showed moderate genetic differentiation between the wild and the cultured populations. Additionally, the softness syndrome population was genetically divergent from wild populations, but it was genetically close to the cultured populations.

Climatological Trend of Sea Water Temperature around the Antarctic Peninsula Waters in the Southern Ocean

  • Lee, Chung-Il;Kim, Sang-Woo;Kim, Dong-Sun;Yoon, Moon-Geun
    • Journal of Environmental Science International
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    • v.21 no.2
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    • pp.125-133
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    • 2012
  • Climatological trend for the period of 1970 to 2009 in sea water temperature around the Antarctic Peninsular waters in the Southern Ocean was investigated. During the period from 1970 to 2009, sea water temperature in the top 500 m water column except 100 m increased at a rate of $0.003-0.011^{\circ}C{\cdot}yr^{-1}$, but at 100 m it decreased at a rate of $-0.003^{\circ}C{\cdot}yr^{-1}$. Although long-term trend is generally warming, there were several periods of sharp changes between 1970 and 2009. Annual mean sea water temperature between surface and 500 m except 100 m decreased from the early of 1970s to the end of 1980s, and then it increased to the end of 2000s. In the entire water column between the surface and 500 m, sea water temperature closely correlated with the El Nino events expressed as the Southern Oscillation Index(SOI), and SOI and sea water temperature have a dominant period of about 3-5 years and decade.

Extracorporeal Worm Extraction of Diphyllobothrium nihonkaiense with Amidotrizoic Acid in a Child

  • Shin, Hye Kyung;Roh, Joo-Hyung;Oh, Jae-Won;Ryu, Jae-Sook;Goo, Youn-Kyoung;Chung, Dong-Il;Kim, Yong Joo
    • Parasites, Hosts and Diseases
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    • v.52 no.6
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    • pp.677-680
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    • 2014
  • Infection cases of diphyllobothriid tapeworms are not much in the below teen-age group. We report a case of Diphyllobothrium nihonkaiense infection in a 13-year-old boy. He presented with severe fatigue, occasional abdominal pain at night time. He also had several episodes of tapeworm segment discharge in his stools. By his past history, he had frequently eaten raw fish including salmon and trout with his families. Numerous eggs of diphyllobothriid tapeworm were detected in the fecal examination. We introduced amidotrizoic acid as a cathartic agent through nasogastroduodenal tube and let nearly whole length (4.75 m) of D. nihonkaiense be excreted through his anus. After a single dose of praziquantel, the child's stool showed no further eggs, and his symptoms disappeared. The evacuated worm was identified as D. nihonkaiense by mitochondrial cox1 gene analysis. Here we report a successful extracorporeal worm extraction from an infection case of D. nihonkaiense by the injection of amidotrizoic acid.

Colletotrichum Disease of Mungbean Sprout by Colletotrichum acutatum

  • Kim, Dong-Kil;Lee, Sun-Chul;Kang, Jin-Ho;Kim, Hee-Kyu
    • The Plant Pathology Journal
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    • v.19 no.4
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    • pp.203-204
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    • 2003
  • Decayed samples of marketed mungbean sprout were collected from Sacheon, Suncheon, and Dangjin cities in Korea. Initial symptom on hypocotyls was dark-brown diamond speck, which developed into enlarged sunken brownish-black spot with irregular margin, followed by softening yellowish decay. Brown speck on cotyledon further developed into irregular lesions. This study isolated the fungus Colletotrichum sp. The fungal colony was pale orange, which turned greenish gray after 1 week at $25^{\circ}C$. Colony of reverse side in a petri dish was pink. Neither conidiomata nor setae were present in the culture. Typical fusiform conidia sized 7.5-15.0$\times$2.5-2.9 $\mu\textrm$were hyaline, aseptate, smooth, and had salmon color in mass. Conidiogenous cells were phialidic, hyaline, smooth, and cylindrical with terminal distinct collarette. Basedon these mycological characteristics, the casual organism was identified as Colletotrichum acutatum. This is first report of Colletotrichum acutatum in Korea.

Nonthermal Sterilization and Shelf-life Extension of Seafood Products by Intense Pulsed Light Treatment (수산물의 비열살균 및 저장성 향상에 대한 광펄스의 효과)

  • Cheigh, Chan-Ick;Mun, Ji-Hye;Chung, Myong-Soo
    • The Korean Journal of Food And Nutrition
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    • v.25 no.1
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    • pp.69-76
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    • 2012
  • Intense pulsed light(IPL) has been highlighted as an innovative nonthermal sterilization technology that can kill spoilage or pathogenic microorganisms by using short-duration pulses of intense broad-spectrum electromagnetic radiation. This paper examines the inactivation effects of IPL on Listeria monocytogenes, Escherichia coli O157:H7, and Pseudomonas aeruginosa inoculated on seafood products such as salmon, flatfish, and shrimps and evaluates the possibility of extending the shelf-life of seafood products. The results indicate that the inactivation of microorganisms increased with an increase in IPL energy density($J/cm^2$) and a decrease in the distance between the sample surface and the lamp. In addition, temperature increases on the fish fillets during the treatments were well controlled within the range of 5.7~$9.8^{\circ}C$. The IPL treatment had a significant positive effect on the storage stability of seafood products at the storage temperature of $4^{\circ}C$ for 12 days. These results suggest that the storage period for fish fillets can be extended from 4 days to 6~8 days through the IPL treatment.

Genetic Structure in Wild Populations of Ayu Plecoglossus altivelis in Korea and Japan

  • Han, Hyon-Sob;Taniguchi, Nobuhiko;Lee, Jong-Ha;Yoon, Moon-Geun
    • Fisheries and Aquatic Sciences
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    • v.14 no.4
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    • pp.295-301
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    • 2011
  • We investigated the genetic structure of Korean and Japanese ayu Plecoglossus altivelis populations by examining 669 individuals from 14 populations using three microsatellite loci. Genetic variation did not differ significantly among the populations examined in terms of allelic number and heterozygosity. Korean populations were genetically close to each other, implying that persistent gene flow has occurred in these populations. This suggests that eastern populations in Korea form a single large population and all of the Korean populations are distinct from the Japanese populations. Pairwise population $F_{ST}$ estimates, principal component analyses, and a neighbor-joining tree showed that genetic separation between the southern and pooled eastern coast populations was probably influenced by restricted gene flow. Hierarchical analysis of molecular variance (AMOVA) revealed a weak but significant genetic structure among three ayu groups (eastern and southern coasts of Korea and the Japan coast), and no genetic variation within groups. The estimated genetic population structure and potential applications of microsatellite markers may aid in the proper management of ayu populations.

Genetic Diversity and Gene Flow Patterns in Pollicipes mitella in Korea Inferred from Mitochondrial DNA Sequence Analysis

  • Yoon, Moongeun;Jung, Ju-Yeon;Kim, Dong Soo
    • Fisheries and Aquatic Sciences
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    • v.16 no.4
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    • pp.243-251
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    • 2013
  • Genetic diversity and gene flow patterns in Pollicipes mitella were investigated with a nucleotide sequence analysis of 514 base pairs from the mitochondrial cytochrome c oxidase subunit I gene (COI) in 124 samples collected from six Korean populations. In total, 59 haplotypes were defined by 40 variable nucleotide sites in the COI region. The haplotypes had shallow haplotype genealogy and no geographic associations. All populations had high haplotype diversity (0.909 to 0.979) and low nucleotide diversity (0.0055 to 0.0098). The haplotypes with recently diverged nucleotides were distributed by long-range larvae dispersal among regional populations. The pairwise fixation indices ($F_{ST}$) estimated with the exact test and migration rates indicate that substantial gene flow has occurred among populations as a result of sea currents, except between the Uljin (East Sea coast) and other Korean populations. This suggests that significant genetic differentiation and low migration rates have affected the Uljin population.

A Study of Marine Aquaculture Management Strategies Using Remotely-sensed Satellite Data - A Case Study on Hallyeo Marine National Park and Tasmania - (위성영상을 이용한 해상 양식장 관리방안 연구 - 한려해상 국립공원과 호주 태즈매니아 지역을 사례로 -)

  • Park, Kyeong;Chang, Eunmi
    • Journal of Environmental Impact Assessment
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    • v.13 no.5
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    • pp.231-241
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    • 2004
  • This study aims to detect the change of marine aquaculture farm within the boundary of Hallyeo Marine National Park. Comparison has been made on the Landsat images taken in 1984 and 2002 respectively by using feature extraction methods and other image analysis techniques. During the 18 year period between 1984 and 2002, total area of the aquaculture farms has been decreased in 63 percent. The reason for the change seems to be that aquaculture farms became concentrated only around the Geoje Islands due to the growth of the labor- and capital-intensive cage aquaculture for the expensive fish species instead of traditional oyster farming. Authors suggest the monitoring using remotely-sensed data as the best tool for the management of marine aquaculture farms on the basis of accuracy of analysis and relatively cheap cost. Management strategies of salmon farms in Tasmania, Australia has been analyzed to find the field techniques necessary for the management of aquaculture.

Safflower (Carthamus tinctorius L.) Anthracnose Casued by Colletotrichum acutatum in Korea (Colletotrichum acutatum에 관한 의한 탄저병)

  • 권진혁;강수웅;김희규;박창석
    • Korean Journal Plant Pathology
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    • v.14 no.6
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    • pp.651-653
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    • 1998
  • A destructive anthracnose of safflower has severely occurred at Kyeongsangnam-do Agricultural Research and Extention Services in 1998. Incidence of the disease surveyed at 12 fields in Chinju, Sanchong and Hamyang was ranged fro 55.7 to 85.4%. Small irregular yellowish to brown spots appeared on all parts of the plant at initial infection stage and the spots enlarged or united into larger irregular to cylindrical black lesions with hollows. Above portions of infected stems were often blighted and pink colored conidial masses were colonized on the lesions. The causal fungus consistently isolated from the infected tissues were identified as Colletotrichum acutatum by following characteristics. The fungus grew well on PDA at 15~3$0^{\circ}C$ developing apricot to salmon color. Conidia were single-celled, colorless, fusiform and bisectioned and measured as 8~18$\times$3~5 ${\mu}{\textrm}{m}$. Brownish appressoria were cylindrical or ovate and sized as 5~10$\times$4~8 ${\mu}{\textrm}{m}$. Optimum temperature for growth and germination of conidia was recorded at $25^{\circ}C$ and at least 6 hours were required for infection to the host plants. Over 90% conidia were germinated and all plants were infected by artificial inoculation by 24 hours at $25^{\circ}C$. This is the first report of safflower anthracnose caused by C. acutatum in Korea.

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Formaldehyde residues in olive flounder(Paralichthys olivaceus) and black rockfish(Sebastes schlegeli) exposed to formalin, and in formalin-treated seawater

  • Jung, Sung-Hee;Kim, Jin-Woo;Sohn, Sang-Gyu
    • Proceedings of the Korean Society of Fisheries Technology Conference
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    • 2000.05a
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    • pp.233-234
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    • 2000
  • Formalin, 37% formaldehyde, has been employed as a chemical for controlling ectoparasites and aquatic fungi responsible for infectious fish of diseases in hatcheries and culture facilities (Roberts, 1978; Schnick, 1991; Rach et al., 1997). Regarding the commercial usage of formaldehyde in the aquaculture industry, the U.S. Food and Drug Administration (FDA) approved three commercial products as parasiticides in a species-specific manner: Paracide-F and Formalin-F for bluegill, catfish, largemouth bass, salmon, and trout and Parasite-S for all finfish (FDA, 1998). Withdrawal time for these products was legally zero when used as permitted under the regulations. With the increased production of cultured fish in Korea, such as olive Hounder Paralichthys olivaceus and black rockfish Sebastes schlegeli, application of formalin to diseased fish has become more frequent. Moreover, there is still some concern about environmental exposures caused by effluents from fish culture facilities. The purpose of the present study was to evaluate residues in fish resulting from therapeutic usage of formalin in the aquaculture industry and to document the rate of disappearance of formaldehyde in seawater treated with formalin. (omitted)

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