• Journal of Microbiology and Biotechnology
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• 제11권1호
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• pp.160-163
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• 2001

In order to investigate the role of bacterial chemotaxis in root colonization, the chemotaxis potential of bacteria isolated from spinach roots was compared with that of bacteria from nonhizosphere soil, with reference to the plant age (1,000 isolates), soil moisture conditons (1,400 isolates), and part of the root (200 isolates). The % CT (% occurrence of chemotaxis (+) isolates among total bacterial isoltes) of the root isolates significantlyfluctuated during the plant growth period, reaching a maximum after 10-15 days of growth. At this time period, the maximum % CT for the root isolates was around 70-80% CT under a soil moisture 50% WFP (% volume of water-filled pores in total soil pores), and then gradually reduced with an increasing % WFP. The results of the chemotaxis potential of each of the 100 islates from the spinach roots and nonrhizosphere soil under various % WFP demonstrated that the % CT of the root isolates were significantly higher than those of solates from the nonrhizosphere soil under a wide range of soil moisture content (35-80% WFP). Furthermore, the % CT value (80%) from the upper root was significantly higher than tht (55%) from the lower root. Compared with the % CT values of the roots, the values from the nonrhizosphere soil did not significantly vary relative to the plant age of % WFP. These results indicate that chemotaxis would appear to be a major factor in bacterial root colonization.

• 한국식물병리학회지
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• 제13권3호
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• pp.160-166
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• 1997

전국에서 채집한 균주들 중 근권정착능력이 있는 균주를 선발하였다. 선발된 대부분의 균주들은 형광성 Pseudomonas속에 속하는 균주들이어고 이들 중 근권정착능력이 아주 우수한 B16과 V13을, 정착능력이 낮은 MC07과 X01을 시험에 공시하였다. 근권정착능력이 우수한 균주 B16과 V13은 종자 발아 초기단계에서의 증식 능력이 우수할 뿐만 아니라, 종자가 발아를 시작하여 유근이 나오는 시기에 이들의 정착밀도가 높았으며, 96시간이 지난 후에도 뿌리의 근단 부위에서 V13과 B16 균주들의 정착밀도가 높았다. 주사전자현미경(SEM)을 통하여 이들의 근권에서의 정착양상을 관찰한 결과, 정착능력이 우수한 균주들은 뿌리의 전반적인 부분에서 증식하고 근단 부위로 이동하는 것을 관찰할 수 있었다. 그러나 정착능력이 낮은 균주들은 유근의 표면에 산발적으로 흩어져 증식한 것을 볼 수 있었다.

• The Plant Pathology Journal
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• 제18권4호
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• pp.225-227
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• 2002

Moth orchid plants with yellowing blight and root rot symptoms were collected, and a total of 54 isolates of Fusarium spp. was obtained from roots and leaf bases of the diseased plants. The isolates were identified based on their morphological characteristics. Out of the 54 isolates of Fusarium spp., 42 isolates were identified as F. solani, 5 isolates as F. oxysporum, and 7 as F. proliferatum. Isolates of the three Fusarium spp. were tested for pathogenicity to moth orchid plants by artificial inoculation. All the Fusarium spp. induced root rot of the host plants. The symptoms progressed up to the basal part of the leaves, which later caused yellowing blight. The symptoms induced on the plants by artificial inoculation with the Fusarium spp. isolates were similar to those observed in greenhouses. The present study reveals that F. oxysporum, F. proliferatum, and F. solani cause root rot of moth orchid, and that F. solani is the main pathogen of the disease.

• The Plant Pathology Journal
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• 제19권3호
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• pp.152-158
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• 2003

Stromata of the white root rot fungus, Rosellinia necatrix, were produced on diseased roots although they were reported to develop rarely in nature. Forty-two (42) out of 47 samples produced synnemata while 23 developed stromata. Forty-seven (47) isolates obtained from diseased root samples were divided into 24 mycelium compatibility groups (MCGs). Sixteen (16) out of 24 MCGs produced stromata. Single ascospore isolates from 10 stroma samples produced dsRNA-containing isolates from diseased tissue beneath stromata. The frequency of synnema production on axenic culture varied among isolates with different origin. The dsRNA was not transmitted vertically to the ascospore offspring despite the infection of various dsRNA in the parental isolates. The dsRNA was absent in 35 ascospore isolates in two stroma samples that originated from the isolates, in which dsRNA was not eliminated by hyphal tip isolation. Consequently, sexual reproduction in the white root rot fungus was suggested to produce propagules as a new infection source and to have the function to eliminate infectious factors such as mycoviruses.

• International Journal of Industrial Entomology and Biomaterials
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• 제31권2호
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• pp.107-114
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• 2015

Endophytes provide multifarious benefits such as promotion of plant growth and yield, suppression of phyto-pathogens, phosphate solubilising and fixation nitrogen. A study has been carried out to explore growth promotion and antifungal activities of endophytes of mulberry (Morus spp.). Endophytic bacteria were isolated from mulberry plants and studied their cultural, morphological characters, growth promotion as well as their antifungal activity against Rhizoctonia bataticola and Fusarium oxysporum , two mulberry root rot associated pathogens. Except two isolates, all bacteria were colourless and the colony size of eight isolates was small. The margin of five isolates was irregular and the consistency of three isolates was creamy, six isolates was slimy and one was mucoid. Texture of seven isolates was convex and others were flat. Eight isolates were gram positive and the rest Gram negative, five were cocci and others were bacilli (rod shaped). Four isolates were motile and all were catalase positive and only three isolates were oxidase positive. Spore staining was positive only for two isolates. The growth promotion study showed that there was significant difference in root length and seedling length. The antagonistic effect of the bacterial isolates was tested against R. bataticola showed significant (p <0.05) influence of the bacteria, days after inoculation and their interaction on the inhibition of fungal growth. The isolate En-7 completely inhibited the fungus followed by En-5 (66.67%). The bacterial isolates significantly (p <0.05) inhibited growth of F. oxysporum in PDA. The mean inhibition was higher (70.45%) in case of En-7 followed by En-8 (68.65%) and En-10 (66.44%). The study reveals that some endophytic bacteria associated with mulberry have growth promotion and antifungal activity and could be explored for promotion of mulberry growth and managing root rot disease.

• 미생물학회지
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• 제20권2호
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• pp.73-79
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• 1982

Among 131 isolates of Strptomyces obtained from ginseng cultivating soil, the two isolates ST59 and ST129 showing high antagonistic activity to Fusarium solani(Mart.) Appel & We. causing ginseng root rot were identified. The two isolates were identified Streptomyces alboniger Porter, et al. and Strptomyces reseolilacinus Pridham, et al., respectively, based on mrophology, cultural, and physiological characteristics on various culture media. Spore chains of ST59 and ST129 were flexuous(RF) and coiled(S). Spore surfaces of two isolates were all smooth. Aerial mass color of ST59 was white series and ST129 red series.

• 한국환경농학회지
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• 제35권2호
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• pp.137-142
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• 2016

BACKGROUND: Identification of endophytic yeasts inhabiting the internal roots of the Mankyua chejuense tree requires techniques involving biotechnology. There is a need for a culture-based method to isolate and identify yeast strains associated with M. chejuense.METHODS AND RESULTS: We spread homogenized M. chejuense root samples onto glucose-peptone- yeast agar containing antibiotics, Triton X-100, and L-sorbose. A total of 152 yeast isolates were obtained and identified via phylogenetic analysis based on ITS gene sequencing. The results revealed that the root-associated yeast species included the genera Cyberlindnera (140 isolates), Candida (11 isolates), and Kluyveromyces (one isolate). Additionally, three yeast isolates showed high bioethanol production.CONCLUSION: We identified the specific yeast community associated with M. chejuense roots. These yeast isolates may have industrial applications as bioethanol producers. Our findings revealed that Cyberlindnera isolates included C. suaverolens and C. satumus, while Kluyveromyces isolates showed high bioethanol production.

• Infection and chemotherapy
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• 제50권4호
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• pp.340-345
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• 2018

Frequent isolation of Enterococcus faecalis from root canal treated teeth with apical periodontitis, has proposed the role of this organism in endodontic treatment failures. Different factors have been suggested in the pathogenicity of this organism. In this study, 22 E. faecalis isolates from canals of root-filled teeth were identified, and phenotypic and genotypic characteristics were investigated. No resistance to vancomycin and gentamicin was noted, and most isolates (91%) were susceptible to ampicillin. Biofilm formation was detected in 73% of the isolates and may be considered as the most important virulence factor involved in the pathogenesis of these isolates.

• 한국균학회소식:학술대회논문집
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• 한국균학회 2014년도 추계학술대회 및 정기총회
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• pp.48-48
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• 2014

Arbuscular Mycorrhizal Fungi(AMF) is widespread symbiont forming mutualistic relationship with plant root in terrestrial forest in ecosystem. They provide improved absorption of nutrient and water, and enhance the resistance against plant pathogen or polluted soil, therefore AM fungi are important for survival and maintaining of individual or community of plant. For last decade, many studies about the functional variation of AM fungi on host plant growth response were showed that different geographic isolates, even same species, have different effect on host plant. However, little was known about functional variation of AM fungal isolates originated single population, which provide important insight about intraspecific diversity of AMF and their role in forest ecosystem. In this study, four AM fungal isolates of Rhizophagus clarus were cultured in vitro using transformed carrot (Daucus carota) root and they showed the difference between isolates in ontogenic characteristics such as spore density and hyphal length. The plant growth response by mycorrhizas were measured also. After 20 weeks from inoculation of these isolates to host plants, dry weight, Root:Shoot ratio, colonization rates and N, P concentration of host plant showed host plant was affected differently by AM fungal isolates. This results suggest that AM fungi have high diversity in their functionality in intraspecific level, even in same population.

• Journal of Microbiology and Biotechnology
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• 제34권3호
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• pp.570-579
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• 2024

Root-nodule nitrogen-fixing bacteria are known for being specific to particular legumes. This study isolated the endophytic root-nodule bacteria from the nodules of legumes and examined them to determine whether they could be used to promote the formation of nodules in other legumes. Forty-six isolates were collected from five leguminous plants and screened for housekeeping (16S rRNA), nitrogen fixation (nifH), and nodulation (nodC) genes. Based on the 16S rRNA gene sequencing and phylogenetic analysis, the bacterial isolates WC15, WC16, WC24, and GM5 were identified as Rhizobium, Sphingomonas, Methylobacterium, and Bradyrhizobium, respectively. The four isolates were found to have the nifH gene, and the study confirmed that one isolate (GM5) had both the nifH and nodC genes. The Salkowski method was used to measure the isolated bacteria for their capacity to produce phytohormone indole acetic acid (IAA). Additional experiments were performed to examine the effect of the isolated bacteria on root morphology and nodulation. Among the four tested isolates, both WC24 and GM5 induced nodulation in Glycine max. The gene expression studies revealed that GM5 had a higher expression of the nifH gene. The existence and expression of the nitrogen-fixing genes implied that the tested strain had the ability to fix the atmospheric nitrogen. These findings demonstrated that a nitrogen-fixing bacterium, Methylobacterium (WC24), isolated from a Trifolium repens, induced the formation of root nodules in non-host leguminous plants (Glycine max). This suggested the potential application of these rhizobia as biofertilizer. Further studies are required to verify the N₂-fixing efficiency of the isolates.