• Title/Summary/Keyword: rice dwarf virus

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Molecular Diagnosis of Rice Black-Streaked Dwarf Virus in Japan and Korea

  • Masamichi Isogai;Ichiro Uyeda;Park, Jang-Kyung
    • The Plant Pathology Journal
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    • v.17 no.3
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    • pp.164-168
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    • 2001
  • Rice black-streaked dwarf virus (RBSDV) and Maize rough dwarf virus (MRDV) are closely related viruses. Since the two viruses produce identical symptoms on maize, barley, and wheat, diagnosis of infected plants is difficult. Previously, we reported that partial cDNA clones of RBSDV S5 and S6 from the Japanese isolate (RBSDV-H) have lower sequence homology to MRDV than do cDNA clones from other genomic segments. In order to test whether cDNA clones of RBSDV-H S5 and S6 can be used for molecular diagnosis, RBSDV field isolates from Korea and from Hokkaido, Japan were tested in dot blot hybridizations probed with RBSDV-H S5 and S6 cDNA colnes. Hybridization with these probes was more intense against the RBSDV genome than against the MRDV genome. Therefore, RBSDV-H S5 and S6 cDNA clones can be used to differentiate between the two viruses. Furthermore, RBSDV-H S5 and S6 clones reacted more strongly against the viruses from stunted maize plants from Korean fields than to MRDV, indicating that RBSDV may be the causal disease agent in maize plants in Korea.

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Disease Occurrence and Overwintering of Rice Dwarf Virus (벼오갈병의 발생 및 병원바이러스의 월동에 대하여)

  • Lee Key Woon
    • Korean Journal Plant Pathology
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    • v.2 no.1
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    • pp.17-21
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    • 1986
  • The viruliferous vectors of the rice dwarf virus, nymphs of Nephotettix cincticeps did not overwinter in Uljin, although the disease occurred in fields. When considered the relationship between seasonal changes of vector and disease occurrence, there were 5 and 3 peaks in a year in occurrence of vector and disease, respectively. The over­wintered adults and the nymphs of the 2nd and 3rd generation served as the major transmittor of the. virus. In a field where the disease has been a problem for years, the ratoon hills rice cultivar Milyang No. 30 was infected $22.4\~26.8\%$ with the rice dwarf virus. When nonviruliferous nymphs were fed on the infected ratoon hills for 11 to 30 days, viruliferous nymphs overwintered, increased to $13.0\~18.2\%$. The winter barley infected with rice dwarf virus did not survive in winter, suggesting that infected barley may not serve as a inoculum source.

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The Complete Genome Sequence of Southern rice black-streaked dwarf virus Isolated from Vietnam

  • Dinh, Thi-Sau;Zhou, Cuiji;Cao, Xiuling;Han, Chenggui;Yu, Jialin;Li, Dawei;Zhang, Yongliang
    • The Plant Pathology Journal
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    • v.28 no.4
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    • pp.428-432
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    • 2012
  • We determined the complete genome sequence of a Vietnamese isolate of Southern rice black-streaked dwarf virus (SRBSDV). Whole genome comparisons and phylogenetic analysis showed that the genome of the Vietnamese isolate shared high nucleotide sequence identities of over 97.5% with those of the reported Chinese isolates, confirming a common origin of them. Moreover, the greatest divergence between different SRBSDV isolates was found in the segments S1, S3, S4 and S6, which differs from the sequence alignment results between SRBSDV and Rice black streaked dwarf virus (RBSDV), implying that SRBSDV evolved in a unique way independent of RBSDV. This is the first report of a complete nucleotide sequence of SRBSDV from Vietnam and our data provides new clues for further understanding of molecular variation and epidemiology of SRBSDV in Southeast Asia.

dsRNA Analysis and Sequence of S12 to Rice dwarf virus Korean Isolate

  • Lee, Bong-Choon;Kwak, Do-Yeon;Hong, Yeon-Kyu;Cho, Hyun-Je;Park, Sung-Tae;Kim, Soon-Chul
    • The Plant Pathology Journal
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    • v.20 no.2
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    • pp.155-157
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    • 2004
  • We isolated Rice dwarf virus (RDV) from infected plants in rice fields (Korea, Japan, China, the Philippines and Nepal) and analyzed their genomic dsRNAs by polyacrylamide gel eletrophoresis. The genomic dsRNAs of the isolates showed distinct electrophoretic mobility profiles. The S12 coding to nonstructural protein of Korean isolate (RDV-Kr) was further analyzed by sequencing. The S12 of RDV-Kr was 1,066bp long and coded for a protein composed of 312 amino acids including three open reading frames of P12, P120Pa and P120Pb. The sequence identities were 96% and 98.6% with Japanese isolates (H, AN), 94.7% with Nepalese isolate (NEL), 94% with Chinese isolate (CK) and the Philippines isolate (P).

Occurrence and Detection of Rice black-streaked dwarf virus in Korea

  • Lee, Bong-Choon;Hong, Yeon-Kyu;Hong, Sung-Jun;Park, Sung-Tae;Lee, Key-Woon
    • The Plant Pathology Journal
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    • v.21 no.2
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    • pp.172-173
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    • 2005
  • Until now, occurrence of Rice black-streaked dwarf virus (RBSDV) is observed in Gyeongsang provinces, southeastern part of Korea. However, recently, the occurrence of RBSDV is increasing and spreading in Jeonra provinces including Gochang-gun, southwestern part of Korea. RBSDV infected plants showed typical symptoms including stunted, deformed leaves with white waxy or black-streaked swelling along the veins. We extracted viral genomic dsRNA from infected leaves and analyzed dsRNA pattern by polyacrylamide gel electrophoresis. Ten genomic segments with similar sized dsRNAs were observed. We also detected RBSDV by reverse transcription (RT)-PCR using specific primers for S10 from genomic dsRNA and observed amplified DNA fragment specific for RBSDV S10.

Studies on the Occurrence of Rice Black-Streaked Dwarf Virus in Korea (한국에서 벼 흑조위축병의 발생에 대하여)

  • Lee Jai Youl;Lee Soon Hyung;Chung Bong Jo
    • Korean journal of applied entomology
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    • v.16 no.2 s.31
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    • pp.121-125
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    • 1977
  • This is the first report on. rice black-streaked dwarf virus in Korea. The occurrence of this virus in Korea was confirmed by symptoms On rice Plants, Vector transmission and microscopic Observation in 1975. The smaller brown planthopper, Laodelphax striatellus FALLEN, transmits this virus which is spherical with a diameter of about 60 nm. Higher infection was observed in earlier transplanted rice with higher levels of fertilizer than in normal and standard cultivation fields.

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Studies on Purification and Serology of Rice Dwarf Virus (벼 오갈병 바이러스의 순화와 항혈청 제조에 관한 연구)

  • Lee Soon Hyung;Lee Key Woon;Chung Bong Jo;Halliwell R. H.
    • Korean journal of applied entomology
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    • v.16 no.1 s.30
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    • pp.65-67
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    • 1977
  • Yield losses from rice dwarf virus infection are significant in Korea. Rice dwarf virus(RDV) was purified and RDV-antiserum was produced. The purified virus, mixed with an adjuvant(1:1) was injected every 10 to 14 days into rabbits. Three injections .were sufficient to produce an antiserum of 1/4,096 titer. The produced antisera will be used to facilitate the detection and identification of RDV in rice plants and in the RDV leafhopper vectors.

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In Situ Localization of Rice dwarf phytoreovirus P12 Protein in Infected Rice Plant (벼오갈병 바이러스 P12 단백질의 벼 감염세포 내 소재양식)

  • Lee Bong-Choon;Hong Yeon-Kyu;Hong Sung-Jun;Park Sung-Tae
    • Research in Plant Disease
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    • v.12 no.1
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    • pp.25-27
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    • 2006
  • Rice dwarf phytoreovirus (RDV), a member of the family Reoviridae has a genome composed of 12 segmented dsRNAs designated as 51 to 512 with an increasing order of mobility in polyacrylamide gel electrophoresis (PAGE). RDV encode 12 structural and non-structural proteins, $P1{\sim}P12$ which are encoded by the $S1{\sim}S12$ segments of the dsRNA genome, respectively. In this experiment, we confirmed in situ localization of RDV particles and P12 in cytoplasm of infected rice plant. We observed specific reaction of the gold particles using virus particle and P12 protein specific antiserum with protein A-gold immunolabelling in electron microscope. It was observed that gold particles specifically react to virus particles in cytoplasm in case using the antiserum for virus particles. In the case of antiserum for P12 protein, gold particles sporadically existing on cytoplasm without existing in organelle of cytoplasm specifically. As this result, RDV P12 protein encoded by S12 located in cytoplasm.

The Effects of Rice Black-Streaked Dwarf Virus on Vector (Laodelphax striatellus U.) and Host Plants (벼검은줄오갈병 바이러스가 매개충 및 기주식물에 미치는 영향)

  • Lee Key Woon;Kim Sang Kyu
    • Korean Journal Plant Pathology
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    • v.1 no.3
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    • pp.190-194
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    • 1985
  • The insect vector (Laodelphax striatellus) of rice black-streaked dwarf virus prefered rice plant to maize in feeding both in the cage and in the field, whereas the percent of infectious plants was much higher in maize than rice plants. The causal virus reduced the adult longevity, total number of hatching nymphs and maturity rate from nymphs of the insect vector. The percent of dry weight over fresh weight in rice from early to late growth stages was lower in diseased plants than in healthy plants but it was reversed on maize plant in early growth stage. In agarose gel-diffusion and microprecipitin serological tests, the intensities of antigen with antisera were in orders the preparation partially purified from infected maize leaves> rice stems> rice leaves> maize stems. The pholem galls in diseased plants developed well in the low temperature.

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A Survey of Viral Diseases of Proso Millet (Panicum miliaceum L.) and Sorghum (Sorghum bicolor L.) in South Korea (국내 기장 및 수수의 바이러스병 발생 조사)

  • Min, Hyun-Geun;Park, Chung Youl;Lee, Hong-Kyu;Yeom, Yoon-Ah;Oh, Jonghee;Kim, Bong-Sub;Lim, Seungmo;Yoon, Youngnam;Lee, Su-Heon
    • Research in Plant Disease
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    • v.23 no.3
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    • pp.262-267
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    • 2017
  • Throughout year 2015 to 2016, 101 proso millet and 200 sorghum samples were collected from five provinces in South Korea. The samples were subjected to paired-end RNA sequencing and further analyzed by RT-PCR. The results indicated that Rice black-streaked dwarf virus (RBSDV) was detected from sorghum collected in Gyeongsang province. The other four viruses, including RBSDV, Rice stripe virus (RSV), Barley virus G (BVG), and Cereal yellow dwarf virus (CYDV), were detected from proso millet. Among four viruses, both RSV and RBSDV were identified high frequency from proso millet collected from Gyeongsang province. Otherwise, BVG was nearly equally identified from five provinces, suggesting that the virus was supposedly widespread nationwide. RBSDV was first identified from both proso millet and sorghum in South Korea. The other virus annotated CYDV identified proso millet was shown to have relatively low identities compared to CYDV previously reported, suggesting that the virus might be new member of Polerovirus.