• 제목/요약/키워드: reverse transcriptase polymerase chain reaction

검색결과 351건 처리시간 0.03초

The Evaluation of the Effect of Herbal Extract on Osteoarthritis: In Vitro and In Vivo Study

  • Kim, Jaeyong;Yang, Siyoung;Choi, Chul-yung
    • Preventive Nutrition and Food Science
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    • 제21권4호
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    • pp.310-316
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    • 2016
  • In this study, the anti-osteoarthritis effects of Cynanchum wilfordii, Phlomis umbrosa, and Angelica gigas extract (CPAE), observed and confirmed in previously clinical studies were further investigated by in vitro and in vivo studies. Anabolic biomarkers related to healthy cartilage maintenance, such as aggrecan, type II collagen ${\alpha}$-1 (Col2a1), sex determining region Y-box-9 (Sox-9), and catabolic biomarkers related to osteoarthritis, such as cyclooxygenase-2 (Cox-2), matrix metalloproteinase-13 (Mmp13), and nuclear factor kappa-light-chain-enhancer of activated B cells ($Nf{\kappa}b$), were evaluated by quantitative reverse transcriptase polymerase chain reaction and reporter gene assay. In vitro study results showed significant changes in both anabolic and catabolic biomarkers. For anabolic factors, significant changes in the level of aggrecan (P<0.05), Col2a1 (P<0.05), and Sox-9 (P<0.01) activation were shown after treatment of cartilage cells with CPAE (50 ng/mL) with similar efficacy compared to insulin growth factor, the positive control (100 ng/mL). For catabolic factors, significant changes in the inhibition activity of Cox-2 (P<0.05), Mmp13 (P<0.01), and $Nf{\kappa}b$ (P<0.05) were shown for CPAE (50 ng/mL) with similar efficacy compared to Celecoxib, the positive control ($10{\mu}M$). In the in vivo carrageenan-induced paw edema model study results showed that CPAE-treated groups (100 mg/kg) and Celecoxib-treated groups (60 mg/kg) showed comparably significant efficacy of inhibition by 37.1% and 52.1%, respectively. Furthermore, CPAE (200 mg/kg) showed similar effect to Celecoxib (60 mg/kg) with an inhibition rate of 54.3%. This result confirms that CPAE effectively inhibited the inflammation-induced osteoarthritis symptoms.

결핵균 감염에 의한 THP-1 세포에서의 Prothymosin alpha 유전자 발현증가 (Up-regulation of Prothymosin alpha in THP-1 Cells Infected with Mycobacterium tuberculosis)

  • 송호연;장광식;변희선;이신제;김진구;최용경;고광균
    • 대한미생물학회지
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    • 제35권2호
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    • pp.149-157
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    • 2000
  • Mycobacterium tuberculosis is capable of growing and survival within macrophage. The purpose of this study was to identify the genes regulated by infection of mycobacteria in human monocytic THP-1 cells. We used the differential display reverse transcriptase polymerase chain reaction (DD RT-PCR) and nothern blot analysis to confirm the differentially expressed genes from THP-1 cells infected with live Mycobacterium tuberculosis H37Rv, heat-killed Mycobacterium tuberculosis H37Rv and live Mycobacterium bovis BCG. Among many up or down-regulated clones, 27 clones were sequenced and compared with known genes on GenBank. Thirteen of over-expressed clones from THP-1 cells infected with live Mycobacterium tuberculosis H37Rv were identical to human prothymosin alpha, eight were novel clones and six clones showed homology with Human ferritin H chain, Esherichia coli bgl, Mouse RNA-dependent EIF-2 alpha kinase, E. coli htrL, Hyaluronan receptor and T cell receptor. Our result suggests that Mycobacterium tuberculosis might regulate prothymosin alpha gene transcription in monocytic THP-1 cell.

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Condurango (Gonolobus condurango) Extract Activates Fas Receptor and Depolarizes Mitochondrial Membrane Potential to Induce ROS-dependent Apoptosis in Cancer Cells in vitro -CE-treatment on HeLa: a ROS-dependent mechanism-

  • Bishayee, Kausik;Mondal, Jesmin;Sikdar, Sourav;Khuda-Bukhsh, Anisur Rahman
    • 대한약침학회지
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    • 제18권3호
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    • pp.32-41
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    • 2015
  • Objectives: Condurango (Gonolobus condurango) extract is used by complementary and alternative medicine (CAM) practitioners as a traditional medicine, including homeopathy, mainly for the treatment of syphilis. Condurango bark extract is also known to reduce tumor volume, but the underlying molecular mechanisms still remain unclear. Methods: Using a cervical cancer cell line (HeLa) as our model, the molecular events behind condurango extract's (CE's) anticancer effect were investigated by using flow cytometry, immunoblotting and reverse transcriptase-polymerase chain reaction (RT-PCR). Other included cell types were prostate cancer cells (PC3), transformed liver cells (WRL-68), and peripheral blood mononuclear cells (PBMCs). Results: Condurango extract (CE) was found to be cytotoxic against target cells, and this was significantly deactivated in the presence of N-acetyl cysteine (NAC), a scavenger of reactive oxygen species (ROS), suggesting that its action could be mediated through ROS generation. CE caused an increase in the HeLa cell population containing deoxyribonucleic acid (DNA) damage at the G zero/Growth 1 (G0/G1) stage. Further, CE increased the tumor necrosis factor alpha ($TNF-{\alpha}$) and the fas receptor (FasR) levels both at the ribonucleic acid (RNA) and the protein levels, indicating that CE might have a cytotoxic mechanism of action. CE also triggered a sharp decrease in the expression of nuclear factor kappa-light-chain-enhancer of activated B cells ($NF-{\kappa}B$) both at the RNA and the protein levels, a possible route to attenuation of B-cell lymphoma 2 (Bcl-2), and caused an opening of the mitochondrial membrane's permeability transition (MPT) pores, thus enhancing caspase activities. Conclusion: Overall, our results suggest possible pathways for CE mediated cytotoxicity in model cancer cells.

모과추출물의 C2C12 근육세포에서 근분화 및 에너지대사조절인자 발현 증진 효과 연구 (Effects of Chaenomelis Fructus Extract on the regulation of myoblasts differentiation and the expression of biogenetic factors in C2C12 myotubes)

  • 강석용;현선영;권예담;박용기;정효원
    • 대한본초학회지
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    • 제34권6호
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    • pp.99-107
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    • 2019
  • Objective : The present study was conducted to investigate the effects of Chaenomelis Fructus (CF) on the regulation of biogenesis in C2C12 mouse skeletal muscle cells. Methods : C2C12 myoblasts were differentiated into myotubes in 2% horse serum-containing medium for 5 days, and then treated with CF extract at different concentrations for 48 hr. The expression of muscle differentiation markers, myogenin and myosin heavy chain (MHC) and mitochondrial biogenesis-regulating factors, peroxisome proliferator-activated receptor gamma coactivator 1alpha (PGC1α), sirtuin1 (Sirt1), nuclear respiratory factor1 (NRF1) and transcription factor A, mitochondrial (TFAM), and the phosphorylation of AMP-activated protein kinase (AMPK) and acetyl-CoA carboxylase (ACC) were determined in C2C12 myotubes by reverse transcriptase (RT)-polymerase chain reaction (RT-PCR) and western blot, respectively. The cellular glucose levels and total ATP contents were measured by cellular glucose uptake and ATP assays, respectively. Results : Treatment with CF extract (0.01, 0.02, and 0.05 mg/㎖) significantly increased the expression of MHC protein in C2C12 myotubes compared with non-treated cells. CF extract significantly increased the expression of PGC1α and TFAM in the myotubes. Also, CF extract significantly increased glucose uptake levels and ATP contents in the myotubes. Conclusion : CF extract can stimulate C2C12 myoblasts differentiation into myotubes and increase energy production through upregulation of the expression of mitochondrial biogenetic factors in C2C12 mouse skeletal muscle cell. This suggests that CF can help to improve skeletal muscle function with stimulation of the energy metabolism.

Biochemical Characteristics of an Alanine Racemase from Xanthomonas oryzae pv. oryzae

  • Kang, Han-Chul;Yoon, Sang-Hong;Lee, Chang-Muk;Koo, Bon-Sung
    • Journal of Applied Biological Chemistry
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    • 제54권4호
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    • pp.231-237
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    • 2011
  • A gene encoding a putative alanine racemase in Xanthomonas. oryzae pv. oryzae was cloned, expressed and characterized. Expression of the cloned gene was performed in Escherichia coli BL21(DE3)pLys using a pET-21(a) vector harbouring $6{\times}histidine$ tag. Purification of the recombinant alanine racemase by affinity chromatography resulted in major one band by sodium dodecyl sulfate polyacryl amide gel electrophoresis analysis, showing about 45 kDa of molecular weight. The alanine racemase gene, cloned in this experiment, appears to be constitutively expressed in X. oryzae, as analyzed by reverse transcriptase polymerase chain reaction. The enzyme was the most active toward L-alanine and secondly D-alanine, showing a racemic reaction, thus the enzyme is considered as an alanine racemase. The enzyme was considerably activated by addition of pyridoxal-5-phosphate (PLP), showing that 75% increase in activity was observed at 0.3 mM, compared with control. D-Cysteine as well as L-cysteine significantly inhibited the enzyme activity. The inhibitions by cysteines were more prominent in the absence of PLP, showing 9 and 5% of control activity at 2 mM of addition, respectively. The enzyme was the most active at pH 8.0 and more stable at alkaline pHs than acidic pH condition.

저산소증에 의한 활막 섬유모세포의 ICAM-1 발현에 대한 항산화제의 영향 (Effects of Antioxidant on the Hypoxia-induced Expression of ICAM-1 in Cultured Human Synovial Fibroblasts)

  • 김정렬;류완희
    • IMMUNE NETWORK
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    • 제2권1호
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    • pp.25-34
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    • 2002
  • Background: Rheumatoid arthritis (RA) is a chronic inflammatory disease characterized by synovial hyperplasia and joint destruction. The synovial fibroblasts express cell adhesion molecules and have a role in adhesive interation with inflammatory cells in synovial tissue. It has been suggested that hypoxic conditioins are thought to exist in arthritic joints, and several studies indicate that reactive oxygen species (ROS) produced in hypoxic condition can initiate events that lead to pro-adhesive changes via increased expression of adhesion molecules. So, this study wsa designed to examine whether antioxidant can inhibit hypoxia-induced expression of ICAM-1 in cultured human synovial fibroblasts. Methods: Synovial fibroblasts were isolated from synovial tissue in patients with RA and cultured at hypoxic condition. Antioxidant, PDTC (pyrrolidine dithiocarbamate) were pre-treated for an hour before the hypoxic culture and synovial fibroblasts were harvested at 0, 6, 12, 24, 48 hours time points. Cell surface ICAM-1 expression in synovial fibroblasts was examined by the flow cytometric analysis. To analyse the expression of ICAM-1 mRNA, reverse-transcriptase polymerase chain reaction (RT-PCR) was performed. The levels of cytokines in culture supernatants were measured by ELISA, and activation of NF-${\kappa}B$ was analysed by electrophoretic mobility shift assay. The adhesive reaction between synovial fibroblasts and lymphocytes was assayed by measurement of fluorescent intensity of BCECF-AM in lymphocytes. Results: Hypoxic stimuli up-regulated the ICAM-1 expression as well as the adhesive interaction of human synvial fibroblasts to lymphocytes in a time-dependent manner, and PDTC inhibited hpyoxia-induced ICAM-1 expression and cell-cell interaction. PDTC also inhibited the hypoxia-induced activation of intracellular transcription factor, NF-${\kappa}B$. PDTC decreased the amount of hypoxia-induced production of IL-$1{\beta}$ and TNF-${\alpha}$. Conclusion: These studies demonstrate that PDTC inhibit the hypoxia-induced expression of the adhesion molecule, ICAM-1 and activation of NF-${\kappa}B$ in cultured human synovial fibroblasts.

지르코니아 표면처리가 골유착에 미치는 영향 (Investigation of effect of zirconia on osseointegration by surface treatments)

  • 정진우;송영균
    • 구강회복응용과학지
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    • 제37권1호
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    • pp.23-30
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    • 2021
  • 목적: 본연구의 목적은 다양한 산용액을 이용하여 지르코니아의 표면을 처리하여 표면의 양상과 골유착에 미치는 영향을 알아보는 것이다. 연구 재료 및 방법: 준비된 지르코니아 디스크에 다양한 산용액 및 광촉매 산부식을 이용하여 표면을 처리하였다. 각 시편을 SEM으로 관찰하고, 골유착을 관찰하기 위해 MC3T3E-1 세포를 이용하여 형광염색과 역전사 중합효소 연쇄반응을 통해 평가하였다. 결과: 처리한 방법에 따라 다양한 거칠기를 보였다. 불산처리군은 표면의 거칠기가 증가하였으나 약한 네트워크 구조를 가지고 있었다. 골유착능에서는 광촉매 산부식을 시행한 군에서 더 좋은 결과를 보였다(P < 0.05). 결론: 지르코니아를 광촉매 산부식방법으로 처리할 경우 다른 산처리방법에 비해 골유착능을 높이는데 효과적일 것으로 사료된다.

에볼라 바이러스 진단법과 개발 동향에 관한 고찰 연구 (Study on Laboratory Diagnosis of the Ebola Virus and Its Current Trends)

  • 정혜선;강윤정
    • 대한임상검사과학회지
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    • 제47권3호
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    • pp.105-111
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    • 2015
  • 2013년 12월 말, 에볼라 바이러스는 서아프리카에서 발발했다. 기니를 시작으로 라이베리아, 시에라리온으로 빠르게 퍼지게 되었다. 에볼라 바이러스(자이르형 에볼라 바이러스)는 외피, 비분절, 음성단일가닥 RNA바이러스이다. 에볼라 바이러스는 인수공통 전염병이다. 바이러스는 처음 감염된 야생동물과 접촉 한 후, 혈액, 땀, 소변, 정액, 모유 등의 체액과의 직접적인 접촉을 통해 사람 대 사람으로 전염된다. 그러나 공기로 전염되지는 않는다. 잠복기는 2~21일이다. 에볼라 바이러스는 내피세포, 단핵 식세포, 간세포를 감염시킨다. 감염 후 바이러스가 숙주의 면역 시스템을 회피하기 위해 여러 메커니즘을 사용한다. 이것은 혈관, 간 등의 내부 조직 및 기관에 막대한 피해를 주어 죽음에 이르게 한다. RNA 바이러스에 대한 대부분의 실험은 역전사 중합효소 연쇄반응(RT-PCR)라 기술에 의존한다. 이 방법은 매우 민감하지만 숙련된 과학자, 전원 공급 장치 요구하며 비싸다. 스트립 분석기법(효소면역분석법, ELISA)은 에볼라 바이러스 항원 또는 항체를 검출한다. 이 기법은 저렴하며, 전기, 냉장 장치가 필요하지 않다. 실험적인 치료 및 백신 개발에 관한 지속적인 노력에도 불구하고, 에볼라 바이러스 질환은 현재 치료법에 제한이 있다. 그러므로 신속하고 정확한 진단이 환자관리, 감염예방, 관리대책에 있어서 매우 중요하다.

상기도 감염으로 입원한 소아환자에서 항생제 사용에 대한 후향적 분석 (A Retrospective Analysis of Use in Hospitalized Children with Upper Respiratory Tract Infection)

  • 정민영;박지현;오지은
    • Pediatric Infection and Vaccine
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    • 제24권2호
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    • pp.87-94
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    • 2017
  • 목적: 상기도 감염인 소아에게 항생제를 처방하는 것은 아직도 많은 진료실에서 이루어지고 있다. 이 연구는 역전사 중합효소연쇄반응 검사로 호흡기 바이러스가 확인된 이후에도 항생제를 사용한 소아 환자들의 임상적 특징을 조사하고자 하였다. 방법: 2013년 1월부터 2014년 11월에 고신대학교 복음병원 소아청소년과에 상기도 감염으로 입원한 환자 중 역전사 중합효소연쇄반응을 시행한 환자들을 대상으로 후향적 의무기록 분석을 통해 평가하였다. 결과: 상기도 감염으로 진단받은 393명 중 전체 환자 연령의 중앙값은 23개월이었다. 입원 당시 항생제를 처방받은 환자(79명, 20.1%)와 항생제를 처방받지 않은 환자들의 임상적 요인을 비교할 때, 중이염 또는 부비동염의 동반, 높은 고감도 C-반응단백질의 수치가 항생제 처방과 의미 있게 관련 있었다(P<0.001). 입원하여 항생제를 사용하던 중 역전사 중합효소연쇄반응 방법으로 호흡기 바이러스가 확인되었지만, 항생제를 계속 사용한 환자는 44명 중 28명(63.6%)이었다. 항생제를 계속 사용한 환자는 항생제를 중단한 환자와 비교할 때 중이염 동반 비율이 유의하게 높았다(75% vs. 25%, P=0.002). 결론: 본 연구에서 상기도 감염의 원인이 바이러스임을 확인된 소아 환자에게서도 항생제를 지속한 주된 이유는 중이염이 동반되었기 때문이었다. 중이염을 정확하게 진단하고 그 중 항생제가 꼭 필요한 경우를 가려낸다면 소아 상기도 감염에서 불필요한 항생제 사용을 줄이는 데 도움이 될 것으로 생각된다.

인면역결핍 바이러스 pol 유전자 염기서열 결정에 의한 지도부딘 (ZDV) 내성 돌연변이의 탐지 (Detection of Mutations to Zidovudine in the pol Gene of Human Immunodeficiency Virus-1 by Direct Sequencing)

  • 조영걸;이희정;성흥섭;김유겸;김영봉;이용진;김미정;김대곤;원영호;조군제
    • 대한바이러스학회지
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    • 제29권4호
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    • pp.271-281
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    • 1999
  • The nested polymerase chain reaction (PCR) assay was used to determine the sequences of reverse transcriptase (RT) codons 41, 67, 70, 210, 215 and 219 of human immunodeficiency virus-1 (HIV-1) pol gene. Template DNA was obtained from uncultured peripheral blood mononuclear cells from 27 Korean HIV-1 infected patients treated with ZDV and Korean red ginseng. The second PCRs were done for 2 separated regions (RT codons $13{\sim}98$ and $152{\sim}259$) with $5\;{\mu}l$ of the first PCR productNucleotide sequences were determined by direct sequencing. In the 27 patients, CD4+ cell count decreased from $230{\pm}117/{\mu}l$ to $152{\pm}162/{\mu}l$ for $46{\pm}26$ months (Mo), and actual duration of ZDV intake was $72{\pm}16$ Mo. In the 16 patients who had been treated with ZDV therapy ${\ge}25$ Mo, the incidences of 70R, 215F/Y, and 41L were 61%, 28% and 22%, respectively and those of 67N, 210W and 219Q were 17%. The incidences of 215F/Y were 6.7% for group ${\le}12$ Mo treatment, 22.7% for group with 13 to 24 Mo, and 27.8% for group ${\ge}25$ Mo. There was no mutation in 9 patients. It might be associated with the interruption of ZDV therapy for more than 6 months in 6 patients. This study shows that the detection of mutation could be useful prognostic marker with other clinical and virological data, and very low mutation rate is dectected compared to overseas reports.

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