• Title/Summary/Keyword: principal component score

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A Study on the Body Type of Hanwoo(Korean Cattle) Steer by Using Principal Components Analysis (주성분 분석을 이용한 거세한우의 체형분류에 관한 연구)

  • Ha, D.W.;Kim, H.C.;Kim, B.W.;Lee, M.Y.;Lee, J.H.;Shin, C.K.;Do, C.H.;Lee, J.G.
    • Journal of Animal Science and Technology
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    • v.44 no.6
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    • pp.643-652
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    • 2002
  • Data were consisted of the ten body measurements (withers height, rump height, body length, chest depth, chest width, rump width, rump length, thurls width, hipbone width and chest girth) of 642 steers (Korean cattle), which was entered in the National Beef Quality Contest hosted by the Korea Animal Improvement Association from 1997 to 2001. A principal components analysis was used to classify the body types of the steers, and estimate the correlations between carcass traits and principal components for the body measurements of the first, second, third and fourth period, respectively. The first principal component of body measurements at the first, second, third and fourth period accounted for 76.0%, 83.0%, 72.7% and 57.4% of the total variance, respectively. The sum of first, second and third principal component at each period accounted for 86.69%, 90.49%, 84.62% and 77.26% of the total variance, respectively. At each period, all the first principal component of the body measurements were positive and it generally showed large framed body shape. The size of body was influenced mostly by chest depth(0.328${\sim}$0.339) and rump length(0.325${\sim}$0.341). The second, third and fourth principal component at the each period were various. There were positive correlations between principal components index of each period and carcass traits such as carcass weight(0.539${\sim}$0.755), average daily gain(0.256${\sim}$0.564), backfat thickness(0.227${\sim}$0.280), and eye muscle area(0.187${\sim}$0.344). The correlation with yield grade index(-0.246${\sim}$-0.110), however, was negative. The correlation with marbling score(0.066${\sim}$0.099) was low or statistically insignificant. According to principal component indexes of the second, third, and fourth components, the correlations with the carcass traits were various. There were no large differences between the correlations of the single body measurement trait with the carcass traits and the correlations of the first principal component indexes with the carcass traits.

Shelf-life prediction of fresh ginseng packaged with plastic films based on a kinetic model and multivariate accelerated shelf-life testing

  • Jong-Jin Park;Jeong-Hee Choi;Kee-Jai Park;Jeong-Seok Cho;Dae-Yong Yun;Jeong-Ho Lim
    • Food Science and Preservation
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    • v.30 no.4
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    • pp.573-588
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    • 2023
  • The purpose of this study was to monitor changes in the quality of ginseng and predict its shelf-life. As the storage period of ginseng increased, some quality indicators, such as water-soluble pectin (WSP), CDTA-soluble pectin (CSP), cellulose, weight loss, and microbial growth increased, while others (Na2CO3-soluble pectin/NSP, hemicellulose, starch, and firmness) decreased. Principal component analysis (PCA) was performed using the quality attribute data and the principal component 1 (PC1) scores extracted from the PCA results were applied to the multivariate analysis. The reaction rate at different temperatures and the temperature dependence of the reaction rate were determined using kinetic and Arrhenius models, respectively. Among the kinetic models, zeroth-order models with cellulose and a PC1 score provided an adequate fit for reaction rate estimation. Hence, the prediction model was constructed by applying the cellulose and PC1 scores to the zeroth-order kinetic and Arrhenius models. The prediction model with PC1 score showed higher R2 values (0.877-0.919) than those of cellulose (0.797-0.863), indicating that multivariate analysis using PC1 score is more accurate for the shelf-life prediction of ginseng. The predicted shelf-life using the multivariate accelerated shelf-life test at 5, 20, and 35℃ was 40, 16, and 7 days, respectively.

Lycium barbarum Polysaccharide Inhibits Lipid Oxidation and Protein Degradation in Tan Sheep Meatballs during Frozen Storage

  • Yu, Jiangyong;Guo, Mei;Liu, Guishan;Zhang, Jingjing;Fan, Naiyun;Li, Xiaorui;Sun, Yourui;Yuan, Jiangtao;Huang, Rui
    • Food Science of Animal Resources
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    • v.42 no.4
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    • pp.580-592
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    • 2022
  • The aim of the present study was to evaluate the effectiveness of Lycium barbarum polysaccharide (LBP) on lipid oxidation and protein degradation in Tan sheep meatballs during the frozen period. The meatballs were treated with LBP at 0.01%, 0.02%, and 0.03% and stored at -18±1℃ for 0, 3, 6, 9, and 12 weeks. The effects of LBP treatment were investigated using the contents of total volatile basic nitrogen (TVB-N), texture profile (TP), thiobarbituric acid reactive substances (TBARS), colour, and pH values, compared with 0.02% butylated hydroxytoluene treatment and the blank control. The results showed that LBP treatment significantly decreased TBARS content compared with the control, which confirmed LBP to be a highly effective component in preventing lipid oxidation of Tan sheep meatballs during frozen storage, and protein degradation in Tan sheep meatballs had a significant inhibition effect because of TVB-N value reduction. In addition, the colour, TP and pH values of meatballs treated with LBP were improved dramatically. To further determine the quality changes of the blank control and all treated groups during storage, the comprehensive score evaluation equation based on principal component analysis was obtained: Y=0.51632Y1+0.29589Y2 (cumulative contribution rate=81.221%), and the 0.02% LBP-treated group had a higher comprehensive score than the other groups, and the quality of LBP-treated meatballs was better as well. In summary, LBP may reduce or inhibit lipid oxidation and protein degradation, and enhance overall quality and shelf-life in prepared meat products.

Evaluation of Water Quality in the Keum River Estuary by Multivariate Analysis (다변량 해석기법에 의한 금강 하구역의 수질평가)

  • 김종구
    • Journal of Environmental Science International
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    • v.7 no.5
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    • pp.591-598
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    • 1998
  • This study was conducted to evaluate water quality in the Keum River estuary using principal component analysis. The results was summarized as follow; Water quality in the Keum River estuary could be explained up to 70.40% by three factors which were included in the inffluent loading by the Keum River and Kyungpo cheon(38.99%), seasonal variation and organic matter pollution(19.05%), sediment resuspension and internal metabolism(12.35%). For spatial variation of factor score, artificial pollutant loading is highest at st.1, below Keum River barrage, and decreases toward the outer sea. For annual variation of factor score, factor 1 was highly related to artificial pollutant leading, and it was gently increased in 1994. Also, organic matter pollution, sediment resuspension and internal metabolism were increased to every year. It is necessary to control the nutrient leading by Keum river and Kyongpo cheon for Water quality management of estuary.

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Representative component scoring system and its validity and applicability (대표성분점수화법의 제안과 이의 타당성 및 활용성에 관한 연구)

  • 이광진
    • The Korean Journal of Applied Statistics
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    • v.10 no.2
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    • pp.275-291
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    • 1997
  • In the case that an abstract concept was measured indirectly by using its indicators, many researcher have obtained its score by using the simple mean, the first principal component, or the first factor, etc. In this paper, an scoring method named as the representative component scoring system was suggested as an alternative and its validity and applicability were studied.

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The analysis of variational characteristics on water quality and phytoplankton by principal component analysis(PCA) in Kogum-sudo, Southwestern part of Korea (주성분분석에 의한 거금수도의 수질환경 및 식물플랑크톤 변동 요인 해석)

  • 윤양호;박종식
    • Journal of Environmental Science International
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    • v.9 no.1
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    • pp.1-11
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    • 2000
  • A study on the variational characteristics of water quality and phytoplankton biomass by principal component analysis(PCA) was carried out in Kogum-sudo from February to October in 1993. We analyzed PCA on biological factors such as chlorophyll a and phytoplankton cell numbers for centric and pennate diatoms, phytoflagellates, and total phytoplankton as well as physico-chemical factors as water temperature, salinity, transparency, dissolved oxygen(DO), saturation of DO, apparent oxygen utilization (AOU), chemical oxygen demand(COD), nutrient (ammonia, nitrite, nitrate, phosphate and silicate), N/P ratio and suspended solid(SS). The source of nutrients supply depended on the mineralization of organic matters and inputs of seawater from outside rather than runoff of freshwater. The phytoplankton biomass was changed within short interval period by nutrients change. And it was controlled by the combination of several environmental factors, especially of light intensity, ammonia and phosphate. The marine environmental characteristics were determined by the mineralization of organic matters in winter, by runoff of freshwater including high nutrients concentration in spring, by ammonia uptake and high phytoplankton productivity in summer, and phosphate supplied input seawater from outside of Kogeum-sudo in autumn. And Kogum-sudo was separated with 2 regions by score distributions of PCA. That is to say, one region was middle parts of straits which was characterized by the mixing seawater and the accumulated organic matters, other one region was Pungnam Bay and the water around Kogum Island which was done by high phytoplankyon biomass and productivity year-round.

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Sensitivity Analysis for Bivariate Spatial Data Using Principal Component Score (주성분점수를 이용한 이변량 공간자료에 대한 감도분석)

  • 최승배;강창완
    • The Korean Journal of Applied Statistics
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    • v.14 no.2
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    • pp.415-427
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    • 2001
  • 공간통계학에서는 다변량 공간자료에 대한 예측방법으로서 코크리깅 기법을 이용한다. 본 논문에서는 코크리깅을 위한 첫 번째 단계인 교차베리오그램의 추정에 대한 감도분석 대신에 일반통계학적 측면에서 주성분점수를 이용한 감도분석방법을 제안한다. 변수가 2개인 경우, 교차베리오그램에 대한 감조분석의 결과와 제안된 주성분점수를 이용한 감도분석의 결과를 비교해 본다. 모의실험을 통하여 제안한 방법의 타당을 검증하고, 실제 자료를 이용한 사례분석의 결과로써 재확인해 본다.

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Prediction of the Freshness for Soybean Curd by the Electronic Nose in the Fluctuating Temperature Condition

  • Youn, Aye-Ree;Noh, Bong-Soo
    • Food Science and Biotechnology
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    • v.14 no.3
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    • pp.437-439
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    • 2005
  • Freshness of stored soybean curd as sensitivity ($R_{gas}/R_{air}$) was evaluated at 48-50 hr intervals using electronic nose at regular sequential square-wave temperatures between $4\;-\;10^{\circ}C$. Obtained kinetic data from apparent first principal component score $(PC1)_{app}$ and storage time were used for prediction of freshness. Percentage difference between predicted and actual values of stored soybean curd was less than 8.9% under fluctuating temperature condition.

Factor Analysis of Genetic Evaluations For Type Traits of Canadian Holstein Sires and Cows

  • Ali, A.K.;Koots, K.R.;Burnside, E.B.
    • Asian-Australasian Journal of Animal Sciences
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    • v.11 no.5
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    • pp.463-469
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    • 1998
  • Factor analysis was applied as a multivariate statistical technique to official genetic evaluations of type classification traits for 1,265,785 Holstein cows and 10,321 sires computed from data collected between August 1982 and June 1994 in Canada. Type traits included eighteen linear descriptive traits and eight major score card traits. Principal components of the factor analysis showed that only five factors explain the information of the genetic value of linear descriptive traits for both cows and sires. Factor 1 included traits related to mammary system, like texture, median suspensory, fore attachment, fore teat placement and rear attachment height and width. Factor 2 described stature, size, chest width and pin width. These two factors had a similar pattern for both cows and sires. In constrast, Factor 3 for cows involved only bone-quality, while in addition for sires, Factor 3 included foot angle, rear legs desirability and legs set. Factor 4 for cows related to foot angle, set of rear leg and leg desirability, while Factor 4 related to loin strenth and pin setting for sires. Finally, Factor 5 included loin strength and pin setting for cows and described only pin setting for sires. Two factors only were required to describe score card traits of cows and sires. Factor 1 related to final score, feet and legs, udder traits, mammary system and dairy character, while frame/capacity and rump were described by Factor 2. Communality estimates which determine the proportion of variance of a type trait that is shared with other type traits via the common factor variant were high, the highest ${\geq}$ 80% for final score, stature, size and chest width. Pin width and pin desirability had the lowest communality, 56% and 37%. Results indicated shifts in emphasis over the twelve-year period away from udder traits and dairy character, and towards size, scale and width traits. A new system that computes fmal score from type components has been initiated.

Chemometric Aspects and Determination of Sugar Composition of Honey by HPLC (HPLC에 의한 꿀 중의 당조성 분석과 화학계량학적 고찰)

  • Yoon, Jung-Hyeon;Bae, Sun-Young;Kim, Kun;Lee, Dong-Sun
    • Analytical Science and Technology
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    • v.10 no.5
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    • pp.362-369
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    • 1997
  • Chemometric technique was applied to the sugar composition in five honeys of known botanical or geographical origin following HPLC. Fructose and glucose were predominant carbohydrates in honeys, and small amount of sucrose was also detected in one sample. Sugar contents in honeys samples were compared by the geographical or botanical origin. Fructose/glucose ratio ranged from 0.99 to 1.55 was obtained and these results are in good agreement with the ratio of literature. The plot of principal components analysis(PCA) showed that different honey samples grouped into distinct cluster by the geographical or botanical origin. Increasing the first or second principal component score, higher amount of sugar or less fructose/glucose ratio was observed in PCA plot. Chemometric approach was very useful to provide pattern recognition of sugar profile or quality indices of honey sample and to detect adulteration.

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