• Title/Summary/Keyword: overlaps

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Echolocation Call Structure of Fourteen Bat Species in Korea

  • Fukui, Dai;Hill, David A.;Kim, Sun-Sook;Han, Sang-Hoon
    • Animal Systematics, Evolution and Diversity
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    • v.31 no.3
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    • pp.160-175
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    • 2015
  • The echolocation calls of bats can provide useful information about species that are generally difficult to observe in the field. In many cases characteristics of call structure can be used to identify species and also to obtain information about aspects of the bat's ecology. We describe and compare the echolocation call structure of 14 of the 21 bat species found in Korea, for most of which the ecology and behavior are poorly understood. In total, 1,129 pulses were analyzed from 93 echolocation call sequences of 14 species. Analyzed pulses could be classified into three types according to the pulse shape: FM/CF/FM type, FM type and FM/QCF type. Pulse structures of all species were consistent with previous studies, although geographic variation may be indicated in some species. Overall classification rate provided by the canonical discriminant analysis was relatively low. Especially in the genera Myotis and Murina, there are large overlaps in spectral and temporal parameters between species. On the other hand, classification rates for the FM/QCF type species were relatively high. The results show that acoustic monitoring could be a powerful tool for assessing bat activity and distribution in Korea, at least for FM/QCF and FM/CF/FM species.

Spark Framework Based on a Heterogenous Pipeline Computing with OpenCL (OpenCL을 활용한 이기종 파이프라인 컴퓨팅 기반 Spark 프레임워크)

  • Kim, Daehee;Park, Neungsoo
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.67 no.2
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    • pp.270-276
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    • 2018
  • Apache Spark is one of the high performance in-memory computing frameworks for big-data processing. Recently, to improve the performance, general-purpose computing on graphics processing unit(GPGPU) is adapted to Apache Spark framework. Previous Spark-GPGPU frameworks focus on overcoming the difficulty of an implementation resulting from the difference between the computation environment of GPGPU and Spark framework. In this paper, we propose a Spark framework based on a heterogenous pipeline computing with OpenCL to further improve the performance. The proposed framework overlaps the Java-to-Native memory copies of CPU with CPU-GPU communications(DMA) and GPU kernel computations to hide the CPU idle time. Also, CPU-GPU communication buffers are implemented with switching dual buffers, which reduce the mapped memory region resulting in decreasing memory mapping overhead. Experimental results showed that the proposed Spark framework based on a heterogenous pipeline computing with OpenCL had up to 2.13 times faster than the previous Spark framework using OpenCL.

DNA 염기 서열의 단편 조립 프로그램 개발

  • Lee, Byung-Uk;Park, Kie-Jung;Park, Wan;Park, Yong-Ha
    • Microbiology and Biotechnology Letters
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    • v.25 no.6
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    • pp.560-565
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    • 1997
  • DNA fragment assembly is a major concem in shot-gun DNA sequencing project. It is to reconstruct a consensus DNA sequence from a collection of random oritented fragments. We developed a computer program that is useful for DNA fragment assembly. Inputs to the program are DNA fragment sequences including IUB-IUPAC bases. The program produces the most probable reconstruction ot the original DNA sequence as a text format or a PostScript format. The program consists of four phases: the first phase quickly eliminates fragment pairs that can not possibly overlap. In the second phase, the quality of overlap between each pair is calculated to a score. In the third phase, overlap pairs are sorted by their scores and consistency of the overlaps is checked. The last phase determines consensus sequences and displays them. The performance of fragment assembly program was tested on a set of DNA fragment sequences which were generated from long DNA sequences of GenBank by a fragmentation program.

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H-NS Silences Gene Expression of LeuO, the Master Regulator of the Cyclic(Phe-Pro)-dependent Signal Pathway, in Vibrio vulnificus

  • Park, Na-Young;Lee, Keun-Woo;Kim, Kun-Soo
    • Journal of Microbiology and Biotechnology
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    • v.30 no.6
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    • pp.830-838
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    • 2020
  • The histone-like nucleoid structuring protein (H-NS) is an abundant global regulator of environmentally controlled gene expression. Herein, we demonstrate that H-NS represses the expression of LeuO, the master regulator of the cyclic(Phe-Pro)-dependent signaling pathway, by directly binding to the upstream region of the gene. H-NS binds to a long stretched region (more than 160-bp long), which overlaps with binding sites for ToxR and LeuO. A high quantity of H-NS outcompetes ToxR for binding to the cis-acting element of leuO. However, our footprinting analyses suggests that the binding of H-NS is relatively weaker than LeuO or ToxR at the same molarity. Considering that the DNA nucleotide sequences of the upstream regions of leuO genes are highly conserved among various Vibrio, such patterns as those found in V. vulnificus would be a common feature in the regulation of leuO gene expression in Vibrionaceae. Taken together, these results suggest that, in species belonging to Vibrionaceae, H-NS regulates the expression of leuO as a basal stopper when cFP-ToxR mediated signaling is absent.

A study of the integration of the 2D ground water model WHPA with Desktop GIS for ground water well development by basic survey stage (지하수 관정개발 기초조사사업 업무지원을 위한 Desktop GIS와 2D 지하수 모델 WHPA 통합 연구)

  • Kim, Man-Kyu;Jung, Byong-Ho;Lim, Chang-Young;Park, Jong-Cheol
    • Proceedings of the Korean Society of Agricultural Engineers Conference
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    • 2002.10a
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    • pp.257-260
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    • 2002
  • This study develops a GIS-based system which examines the adequacy of the Groundwater development project before the actual designing of the project. Using the system developed here, we can transfer simulation results obtained by WHPA regarding Groundwater levels in new development projects into GIS. We can also judge whether a Groundwater development project should be permitted through examining overlaps of the effects of the development and comparing with other pollutants. Since a two-tiered system which shares DB using inter- and intranets is developed, all the departments in the ministry of agriculture and forest and the agriculture base corporation can share accurate, reliable and latest information related to Groundwater.

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A Study on Design of Elementary Schoolhouse for Mixed-use Facilities (초등학교 교사의 복합용도계획에 관한 연구)

  • Lee, Hyun-Jae;Kang, Chul-Hee
    • Korean Institute of Interior Design Journal
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    • v.17 no.1
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    • pp.138-145
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    • 2008
  • This study is conducted to formulate various spatial compositions for mixed-use elementary schools in order to use them as community centers. Accordingly, this study is conducted to analyze currently operating community-use elementary schools to find out about the current condition of mixed-use facilities, and the types of mixed-use facilities will be derived from the analysis. In addition, a more effective method of planning mixed-use elementary schools is investigated. By incorporating various educational curricula and teaching/learning activities, major points, which should be considered when planning elementary schools, will be suggested to effectively respond to the changes of educational environment in the future. The results show that in terms of inner traffic flow type, 9 schools out of the schools under study showed a unificated traffic flow type or a cross traffic flow type. When traffic overlaps, problems of noise, visual distraction, and decreased learning performance can appear. To prevent the conflict between areas and to manage areas effectively, each area should be differentiated by installing doors and shutters and by marking guides, and the facility used for community residents and students should also be scheduled separately to avoid time conflict. In addition, to accommodate the changes of users, flexible space planning options should be considered.

Timing Driven Placement using Force Directed Method and Optimal Interleaving Technique (포스 디렉티드 방법과 최적 인터리빙 기법을 이용한 타이밍 드리븐 배치)

  • Sung Young-Tae;Hur Sung-Woo
    • Journal of KIISE:Computer Systems and Theory
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    • v.33 no.1_2
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    • pp.92-104
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    • 2006
  • The proposed method for a force directed global placement algorithm exploits and extends techniques from two leading placers, Kraftwerk (& KraftwerkNC) and Mongrel. It combines the strengths of KraftwerkNC, force directed global placer, and Mongrel's ripple move technique which resolves cell overlaps effectively The proposed technique uses the force spreading technique used in Kraftwerk to optimize the ripple movement. While it is resolving the cell overlap and optimizing wire length physical net constraints are considered for timing. The experimental results obtained by the proposed approach shows significant improvement on wire length as well as on timing.

Frameworks of Construction Information Systems under the Changing Industry Paradigms (건설산업 환경변화에 따른 건설정보화 개념요소 고찰)

  • Joo, Mi-Hee;Jung, Young-Soo
    • Proceedings of the Korean Institute of Building Construction Conference
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    • 2010.05a
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    • pp.115-118
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    • 2010
  • The concept of construction information systems (IS) is very comprehensive and subjective. Acronyms in relation to the construction IS may include BIM, CIC, IT, nD-CAD, ERP, CALS, KM and so on. These terminologies are used in a somewhat mixed way causing possible misunderstandings in research and practice of construction information systems. Moreover, ever-changing construction business environment has widely affected the roles and methods of utilizing construction IS. Examples of these changes are dissemination of alternative project delivery systems, global standardization under highly competitive overseas market, and advancement of information and communication technologies. In this context, the purpose of this paper is to propose a high-level framework for information systems in the construction industry. Several different concepts in the area of construction IS were investigated first in order to identify the major variables of the framework. Trends of research and real-world implementations were then analyzed to support the rationale of the variables. Finally, a framework was proposed by re-arranging the relevant issues. Findings of this paper indicate that different acronyms commonly share many similar concepts in their definitions, however, in each acronym, the motivations and approaches to implementing construction IS are very different. Different approach can provide maximum effectiveness, while overlaps may happen causing practical inefficiency.

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Fatigue Life Estimation of Welding Details by Using a Notch Strain Approach (노치변형률법을 적용한 용접구조상세의 피로수명평가)

  • Han, Jeong-Woo;Han, Seung-Ho;Shin, Byung-Chun;Kim, Jae-Hoon
    • Transactions of the Korean Society of Mechanical Engineers A
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    • v.28 no.7
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    • pp.977-985
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    • 2004
  • An evaluation of fatigue life of welded components is complicated due to various geometrically complex welding details and stress raisers in vicinity of weld beads, ego under cuts, overlaps and blow holes. These factors have a considerable influence on the fatigue strength of welded joints, as well as the welding residual stress which is relaxed depending on the distribution of local stress at the front of the stress raisers. To reasonably evaluate fatigue life, the effect of geometries and welding residual stress should be taken into account. The several methods based on the notch strain approach have been proposed in order to accomplish this. These methods, however, result in differences between analytical and experimental results due to discrepancies in estimated amount of relaxed welding residual stress present. In this paper, an approach that involves the use of a modified notch strain approach considering geometrical effects and a residual stress relaxation model based on experimental results was proposed. The fatigue life for five types of representative welding details, ego cruciform, cover plate, longitudinal stiffener, gusset and side attachment joint, are evaluated using this method.

Stupa Form of India, The Kushan Era (인도 쿠샨시대의 스투파 형식)

  • Cheon, Deuk-Youm;Kim, Juno
    • Journal of architectural history
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    • v.21 no.6
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    • pp.77-90
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    • 2012
  • The typical form of Indian Stupa, which is going to understood the gradual development and various forms at the Kushan-era Stupa. Buddhist art and architecture of the Kushan-era was influenced Gandharan Hellenistic culture of the foreign. And indigenous Indian cultures of mature was visually big change. The Kushan-era Stupa has been ten feature. First, a circular podium at typical form of the initial Stupa was constantly changed. Second, is the Stupa of the overlaps and increase podium. Third, the Stupa has been square podium. Forth, is down scale of Anda(Bokbal). Fifth, increases the Stupa and Railing smaller, and Change the position of the Torana(gateway). Sixth, changing the target of the faith, thereby a statue of Buddha has been added in the Stupa. Seventh, around the main Stupa and podium are made in a tabernacle. Eighth, the developed spokes structure was added to on the podium inside. Ninth, crosswise plan appears unlike general Stupa. This type has relevance with Tower Stupa. Tenth, the Votive Stupa was added to the temples and Apse type chaitya has been developed.