• Title/Summary/Keyword: optimum population

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Development of a highly effective T-DNA inserted mutant screening method in a Chinese cabbage (Brassica rapa L. spp. pekinensis) reverse genetics system

  • Lee, Gi-Ho;Kang, Yoon-Jee;Yi, Seul-Ki;Lim, Suk-Bin;Park, Young-Doo
    • Plant Biotechnology Reports
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    • v.4 no.3
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    • pp.201-211
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    • 2010
  • We present a highly effective T-DNA inserted gene screening method as part of a reverse genetics model system using the Chinese cabbage (Brassica rapa L. spp. pekinensis). Three-step two-dimensional (2D) matrix strategies are potentially accurate and useful for the identification of specific T-DNA inserted mutants from a large population. To construct our Chinese cabbage model, we utilized a forward genetics screening approach for the abnormal phenotypes that were obtained from transgenic plants of Brassica rapa generated with Agrobacteria tumefaciens containing the pRCV2 vector. From one transgenic plant with an abnormal phenotype, we observed that the st1 gene (which is related to senescence-associated process proteins) contained a T-DNA fragment, and that its expression level was decreased. This T-DNA insert was then used as a control to construct an effective screening pool. As a result, the optimum template concentration was found to be 0.1-1 ng in our PCR strategy. For other conditions, positive changes to the Gibbs free energy prevented the formation of oligo dimers and hairpin loop structures, and autosegment extension gave better results for long fragment amplification. Using this effective reverse genetics screening method, only 23 PCR reactions were necessary to select a target gene from a pool of 100 individual DNAs. Finally, we also confirmed that the sequence we obtained from the above method was identical to the flanking sequence isolated by rescue cloning.

The Role of Milk Product in Nutritional Intake and Chronic Disease Reduction (영양 섭취와 만성질환 예방을 위한 우유의 역할)

  • Choi, Suk-Ho;Lee, Seung-Bae
    • Journal of Dairy Science and Biotechnology
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    • v.28 no.1
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    • pp.53-59
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    • 2010
  • The milk product is one of the major foods which provide calcium for nutritional requirement. In addition to calcium, it supplies diverse nutrients including protein, potassium, vitamin A, vitamin $B_1$, and vitamin $B_2$. Adequate calcium intake throughout lifetime ensures optimum bone density and prevents osteoporosis in old age by reducing loss of bone mineral during growth and aging. The nutritional deficiency of calcium intake and spreading of osteoporosis in Korean population accentuated necessity of adequate calcium intake through milk consumption. Obstruction of milk consumption due to lactose intolerance should be overcome by educational programs for adequate milk consumption and low-lactose milk product developments. Consumption of milk products was reported to prevent high blood pressure in clinical studies and epidemiological investigations. As the feeding of milk increased, the body weight and fat of animal decreased in animal studies. The epidemiological investigations revealed that there was a negative correlation between the amount of milk consumption and the body fat. When calcium was provided as dietary supplement in the clinical trials, the body weight and body fat of subjects decreased. When calcium was particularly supplied as a part of milk, the body weight reduction rate was augmented. Calcium, vitamin D, and conjugated linoleic acid have been reported to exert a role in reducing cancer. The paramount importance of milk in nutrition as a source of calcium and other invaluable nutrients emphasizes consistent supply of milk products to adults as well as adolescents by dairy industry.

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A Study on Mechanized System of Barley Harvesting (보리의 기계수확체계(機械收穫體系) 시험(試驗))

  • Kim, Jeung Soo;Lee, Dong Hyeon;Baek, Poong Ki;Jeung, Doo Ho
    • Journal of Biosystems Engineering
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    • v.7 no.2
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    • pp.36-44
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    • 1983
  • Farm population was rapidly decreasing due to shift of the people from farm sector to the non-farm sector caused by the economic growth of the country. Especially, a great shortage of farm labor in busy farming period in June and October is becoming a serious problem in maintaining or promoting land productivity. The peak of labor requirement in summer is caused by rice transplanting and barley harvesting. In order to reduce the restrictions imposed on farm management by the concurrence of labor requirement and the lack of labor, the experimental study for mechanization of barley harvesting has been carried out in the fields. 1. The machines for barley harvesting were knap-sack type reapers, windrow reaper (power tiller attachment), binder and combine. The order of higher efficiency of machine for barley harvesting was combine, binder, windrow reaper (WR), knapsack type reaper 1(KSTR1), and knap sack type reaper 2(KSTR2; mist and duster attachment). 2. The ratio of grain loss for the manual, binder, and combine plot was about four percent of total field yield. 3. The total yield of barley in 35 days and 40 days harvesting after heading were 514 kg and 507kg per 10 ares respectively. The yield of 35 days-plot was higher than other experimental plots. 4. The lowest yield was recorded in 30 days-plot due to the large quantity of immatured grains and having lighter 1000-grain weight. The ratio of immatured grains was 2.66 percent and 1000-grain weight was 29.4 grams. 5. The total harvesting cost of the windrow reaper was 10,178 won per 10 ares. It was the lowest value compared to other machines. The next were combine, binder, KSTR1, KSTR2, and manual in sequence. As a result, the optimum time of barley harvesting for mechanization was 35-40 days after heading. Combine, binder, and windrow reaper were recommended as the suitable machines for barley harvesting in the work efficiency. However, in total harvesting cost, the windrow reaper was the most promising machine for barley harvesting.

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Reevaluation of the Change of Leuconostoc Species and Lactobacillus plantarum by PCR During Kimchi Fermentation

  • Choi, Jae-Yeon;Kim, Min-Kyun;Lee, Jong-Hoon
    • Journal of Microbiology and Biotechnology
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    • v.12 no.1
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    • pp.166-171
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    • 2002
  • The genus Leuconostoc is generally recognized as a favorable microorganism associated with a good taste of Kimchi and Lactobacillus plantarum is responsible for the overripening and acidification of Kimchi. A rapid and reliable PCR-based method to monitor the change of these lactic acid bacterial populations during Kimchi fermentation was attempted. A Leuconostoc-specific primer set was chosen from the conserved sequences of 16S rRNA genes among Leuconostoc species. The Lb. plantarum-specific primer set was the internal segments of a Lb. plantarum-specific probe which was isolated after randomly amplified polymorphic DNA (RAPD) analysis and tested for identification. The specificity of this protocol was examined in DNA samples isolated from a single strain. In agarose gel, as little as 10 pg of template DNA could be used to visualize the PCR products, and quantitative determination was possible at the levels of 10 pg to 100 ng template DNA. For the semi-quantitative determination of microbial changes during Kimchi fermentation, total DNAs from the 2 h-cultured microflora of Kimchi were extracted for 16 days and equal amounts of DNA templates were used for PCR. The intensities of DNA bands obtained from PCR using Leuconostoc-specific and Lb. plantarum-specific primer sets marked a dramatic contrast at the 1 ng and 100 ng template DNA levels during Kimchi fermentation, respectively. As the fermentation proceeded, the intensity of the band for Leuconostoc species increased sharply until the 5th day and the levels was maintained until the 11 th day. The sharp increase for Lb. plantarum occurred after 11 days with the decrease of Leuconostoc species. The results of this study indicate that Leuconostoc species were the major microorganisms at the beginning of Kimchi fermentation and reach their highest population during the optimum ripening period of Kimchi.

Utilization of Potato Starch Processing Wastes to Produce Animal Feed with High Lysine Content

  • Li, Ying;Liu, Bingnan;Song, Jinzhu;Jiang, Cheng;Yang, Qian
    • Journal of Microbiology and Biotechnology
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    • v.25 no.2
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    • pp.178-184
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    • 2015
  • This work aims to utilize wastes from the potato starch industry to produce single-cell protein (SCP) with high lysine content as animal feed. In this work, S-(2-aminoethyl)-L-cysteine hydrochloride-resistant Bacillus pumilus E1 was used to produce SCP with high lysine content, whereas Aspergillus niger was used to degrade cellulose biomass and Candida utilis was used to improve the smell and palatability of the feed. An orthogonal design was used to optimize the process of fermentation for maximal lysine content. The optimum fermentation conditions were as follows: temperature of 40℃, substrate concentration of 3%, and natural pH of about 7.0. For unsterilized potato starch wastes, the microbial communities in the fermentation process were determined by terminal restriction fragment length polymorphism analysis of bacterial 16S rRNA genes. Results showed that the dominant population was Bacillus sp. The protein quality as well as the amino acid profile of the final product was found to be significantly higher compared with the untreated waste product at day 0. Additionally, acute toxicity test showed that the SCP product was non-toxic, indicating that it can be used for commercial processing.

Verify a Causal Relationship between Fine Dust and Air Condition-Weather Data in Selected Area by Contamination Factors (오염 요인별 지역선정을 통한 대기-기상자료의 미세먼지 인과관계 검증)

  • Han, Jeong-Min;Kim, Jae-Goo;Cho, Ki-Hyun
    • The Journal of Bigdata
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    • v.2 no.1
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    • pp.17-26
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    • 2017
  • The gradual desertification in Northeastern China brought about by the industrial development and global warming, has affected the Korean peninsula as evident by the ultrafine dust geographically and seasonally. People with severe respiratory problems, senior citizens and the infants are susceptible to the ill effects of fine dust which could prove fatal to them. Hence, we need to study the root cause of fine dust emergence and the correlation verification between fine dust and its side effects. This study firstly analyzed clean and contaminated areas classified by industrial elements. We utilized air, weather and industrial data in the area. Next, we detected a change of fine dust in terms of weather and climate. We analyzed correlation of air and weather by influence from domestic and neighboring country. The result indicated that China is the culprit of the emergence of fine dust predicament. Consequently, we can prove that fine dust ($PM_{10}$) and ultrafine dust ($PM_{2.5}$) could arise from geographical, seasonal, and pollutant elements. Therefore, we propose the optimum to make countermeasures about fine dust in terms of industry, topography, population and living residence.

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A Study on VS Removal Efficiency and Methane Emission in Combined Anaerobic Digestion of Livestock Manure and Food Waste (가축분뇨 및 음식물쓰레기의 혐기성 소화 병합처리 시 VS 제거효율과 메탄 발생량의 관한 연구)

  • Choi, Young-Ik;Ji, Hyeon-Jo;Jung, Jin-Hee;Jung, Byung-Gil;Kim, Jung-Geon
    • Journal of Environmental Science International
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    • v.27 no.9
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    • pp.737-742
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    • 2018
  • Livestock manure treatments have become a more serious problem because massive environmental pollutions such as green and red tides caused by non-point pollution sources from livestock manures have emerged as a serious social issue. In addition, more food wastes are being produced due to population growth and increased income level. Since the London Convention has banned the ocean dumping of wastes, some other waste treatment methods for land disposal had to be developed and applied. At the same time, researches have been conducted to develop alternative energy sources from various types of wastes. As a result, anaerobic digestion as a waste treatment method has become an attractive solution. In this study has three objectives: first, to identify the physical properties of the mixture of livestock wastewater and food waste when combining food waste treatment with the conventional livestock manure treatment based on anaerobic mesophilic digestion; second, to find the ideal ratio of waste mixture that could maximize the collection efficiency of methane ($CH_4$) from the anaerobic digestion process; and third, to promote $CH_4$ production by comparing the biodegradability. As a result of comparing the reactors R1, R2, and R3, each containing a mixture of food waste and livestock manure at the ratio of 5:5, 7:3, and 3:7, respectively, R2 showed the optimum treatment efficiencies for the removal of Total Solids (TS) and Volatile Solids (VS), $CH_4$ production, and biodegradability.

Effect of Taping and Virtual Reality Combined Exercise on Static and Dynamic Balance With Functional Ankle Instability

  • Kim, Ki-jong;Gang, Mi-yeong
    • Physical Therapy Korea
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    • v.27 no.4
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    • pp.292-297
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    • 2020
  • Background: Ankle sprain is one of the most common musculoskeletal injuries in the sports population or during usual daily life activities. The sprain can cause functional ankle instability (FAI), and it is very important to treat FAI. However, the optimum intervention method for FAI has yet to be determined. Objects: This study investigated the impact that virtual reality (VR) training program on balance with ankle kinesio taping for FAI. Methods: Twenty-two people were selected for the study and randomly divided into the experimental (n = 11) and the control group (n = 11). The experimental group had attached kinesio taping on the ankle and then implemented a virtual reality exercise program for 30 minutes a day. Nintendo Wii Fit Plus was used for the VR intervention three times a week for four weeks. The control group performed only two measurements without intervention. Results: There were no statistically significant differences in overall, anterior-posterior (AP), medial-lateral (ML) index of the static balance, and significant differences in overall, AP, ML index of the dynamic balance when taping and VR exercise were applied at the same time (p < 0.05). There were no significant differences in overall and ML index of static and dynamic balance compared with before and after assessment between the experimental and the control group, and found differences in AP index of static and dynamic balance (p < 0.05). Conclusion: Kinesio taping may not influence the balance of FAI as great as people expected. VR approach does not affect the static balance of FAI, but it influences dynamic balance in overall, AP, ML index. The authors suggest that VR-based exercises can be used as an additional concept in clinicians for FAI or as part of a home program because the exercises still have limitations.

Cultural Characteristics and Ascospore Density in Soil of Monosporascus Cannonballus on Cucurbitaceae Plants (박과류 검은점뿌리썩음병균의 배양적 특성 및 토양내 자낭포자 밀도)

  • 허노열;류경열;이용범
    • Research in Plant Disease
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    • v.7 no.1
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    • pp.16-19
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    • 2001
  • The cultural caracteristics of Monosporascus cannonballus causing root rot of Cucurbitaceae plants were examined in vitro, and population density of the fungal ascospores were measured and compared aoming diferent host species and soil depths. Potato-dextrose agar(PDA) was the most appropriate medium for the mycelial growth and perithecial formation among the 5 media tested. Corn-meal agar(CMA), oat-meal agar (OMA) and V-8 juice agar were moderate media for the mycelial growth and perithecial formation, whereas water agar(WA) was poor medium. Perithecia were not formed on WA. Optimum temperature for the formation of perithecia was about 25 to 30$^{\circ}C$. distribution of ascospores in the infested fields was variable amount the curcubitaceae plants and within the same plant species, ranging from 1.7 to 14.6 ascospores in 20 g of soil, but no ascospore was detected in the uninfested field soils. Ascospores were distributed more at 20cm of soil depth than at 10cm or 30cm of soil depth.

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The Principle and Application of Bioremediation (생물학적 복구법(Bioremediation)의 원리와 응용)

  • 정재춘;박창희;이성택
    • Journal of Korea Soil Environment Society
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    • v.1 no.2
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    • pp.3-13
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    • 1996
  • The efficiency of bioremedation can be measured by the enumeration of microorganism, respiration rate and decomposition rate. The side-effect can be measured by using Daphnia, oyster larvae and rainbow trout. Oxygen transfer could be a problem in the on-site treatment. For these, hydrogen peroxide can be used for solvents such as benzenes. Oleophilic nitrogen and phosphorus can be added for the treatment of oil pollution. Mixed microbial population or pure culture can be used for the inoculum. The pure culture used is Pseudomonas and Phanerochate. Sometimes enzymes are added and Photodegadation is coupled to increase the efficiency. For the treatment of oil pollution residue on soil such as waste lubrication oil and machine oil sludges, top soil of 15cm∼20cm depth is plowed and oil residue with approximately 5% concentration is applied. The optimum pH range is 7∼8, the ratio of phosphorus to hydrocarbon is 1:800. Appropriate drainage is necessary. For the treatment of marine oil pollution residue, addition of oleophilic fertilizer is effective. Air pollutiant such as oder can be treated by bioremediation. In this case, biofilters or biosrubbers are used for the reactor.

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