• 제목/요약/키워드: optimal pathway

검색결과 105건 처리시간 0.026초

수냉식 화격자 유로 형상에 따른 냉각수의 정체 영역 및 체류 시간 변화 (CHANGES IN STAGNATION REGION AND RESIDENCE TIME OF COOLING WATER FOR VARIOUS FLOW CHANNEL GEOMETRY OF WATER COOLING GRATE)

  • 송동근;김상복;박도원
    • 한국전산유체공학회지
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    • 제21권2호
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    • pp.106-111
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    • 2016
  • Waste-to-energy facilities including incinerators are known as an efficient method to reduce wastes. In waste-to-energy facilities, more efficient cooling system is still needed for grates as the energy density of waste increased. For better cooling performance with the water-cooled grates, optimal design of cooling water pathways is highly beneficial. We performed numerical investigation on fluid flow and residence time of cooling water with change of the geometry of the cooling water pathway. With addition of round shaped guide vanes in the water pathway, the maximum residence time of flow is reduced(from 4.3 sec. to 2.4 sec.), but there is no significant difference in pressure drop between inlet and outlet, and average residence time at the outlet. Furthermore the flow stagnation region moves to the outlet, as the position of the round shaped guide vanes is located to the neck point of pathways.

Computed Tomography (CT) Simulated Fluoroscopy-Guided Transdiscal Approach in Transcrural Celiac Plexus Block

  • Kong, Yu Gyeong;Shin, Jin Woo;Leem, Jeong Gill;Suh, Jeong Hun
    • The Korean Journal of Pain
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    • 제26권4호
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    • pp.396-400
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    • 2013
  • Conventional transcrural CPB via the "walking off" the vertebra technique may injure vital organs while attempting to proximally spread injectate around the celiac plexus. Therefore, we attempted the CT-simulated fluoroscopy-guided transdiscal approach to carry out transcrural CPB in a safer manner, spreading the injectate more completely and closely within the celiac plexus area. A 54-year-old male patient with pancreatic cancer suffered from severe epigastric pain. The conventional transcrural approach was simulated, but the needle pathway was impeded by the kidney on the right side and by the aorta on the left side. After simulating the transdiscal pathway through the T11-12 intervertebral disc, we predetermined the optimal insertion point (3.6 cm from the midline), insertion angle (18 degrees), and advancement plane, as well as the proper depth. With the transdiscal approach, we successfully performed transcrural CPB within a narrow angle, and the bilateral approach was not necessary as we were able to achieve the bilateral spread of the injectate with the single approach.

Streptococcus LJ-22, a human intestinal bacterium, transformed glycyrrhizin to 18$\beta$-glycyrrhetinic acid monoglucuronide

  • Kim, Dong-Hyun;Lee, Seoung-Won;Park, Hae-Young;Han, Myung-Joo
    • 한국응용약물학회:학술대회논문집
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    • 한국응용약물학회 1998년도 Proceedings of UNESCO-internetwork Cooperative Regional Seminar and Workshop on Bioassay Guided Isolation of Bioactive Substances from Natural Products and Microbial Products
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    • pp.125-125
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    • 1998
  • Glycyrrhizin (18$\beta$-glycyrrhetic acid $\beta$-D-glucuronyl a-D-glucuronic acid, GL), a main component of liquore extract (Glycyrrhiza glabra), is ingested orally as a component in the oriental medicine. By human intestinal bacteria, glycyrrhizin (18$\beta$-glycyrrhetinic acid $\beta$-D-glucuronyl a-D-glucuronic acid, GL) was metabolized to glycyrrhetinic acid (GA): main pathway metabolizing GL to GA by glucuronidases of Bacteroides J-37 (Kim et al., 1997) and Eubacterium sp strain GLH (Akao et al., 1987) and minor pathway metabolizing GL to GA via 18$\beta$-glycyrrhetic acid D-glucuronic acid (GAMG) by $\beta$-glucuronidase of Streptococcus LJ-22 and glucuronidases of Bacteroides J-37 / E. coli. $\beta$-Glucuronidase from Streptococcus LJ-22 hydrolyzed GL to GAMG, not GA. $\beta$-Glucuronidase of Streptococcus LJ-22 hydrolyzed $\beta$-glucuronic acid conjugates of polysaccharides rather than aglycone-$\beta$-glucuronides Optimal pH of Streptococcus LJ-22 $\beta$-glucuronidase was 5-6 and its molecular weight was 250 kDaltons. Km for GL was 0.37mM.

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형질 전환된 페튜니아 식물체에서의 Flavonoid 3',5' -Hydroxylase 유전자의 분석 (Analysis of Flavonoid 3',5'-Hydroxylase Gene in Transgenic Petunia (Petunia hybrida) Plants)

  • 김영희
    • 식물조직배양학회지
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    • 제25권5호
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    • pp.323-327
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    • 1998
  • 페튜니아에서의 안토시아닌 생합성 경로는 하나의 중요한 유전적인 모델시스템으로 연구되어 왔다. 본 연구에서는 이 경로에 대한 유전자를 연구하기 위하여 CaMV 35S promoter와 가지로부터 분리된 flavonoid 3',5'-hydroxylase cDNA를 pBI121 플라스미드에서 fusion gene 시스템을 만들었다. 형질전환된 페튜니아를 얻기 위한 최적조건이 페튜니아 절간을 IAA 0.2 ㎎/mL, BA 3 ㎎/mL를 혼용한 MS배지에서 얻었다. 효과적인 형질전환을 위하여 페튜니아 절간을 IAA 0.2㎎/L BA 3㎎/L를 혼용한 BM배지에서 Agrobacterium tumefaciens를 접종하기 전에 절편체를 preculture하였다 형질전환체는 50㎎/L kanamycin과 cefotaxim 300㎎/L을 포함하는 배지에서 선발하였다. PCR과 Southern hybridization분석에 의하여 형질전환체를 검증하였다.

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메탄올만 이용하여 성장하는 Methylobacillus의 분리 및 특성 (A Methylobacillus Isolate Growing Only on Methanol)

  • 김시욱;김병홍;김영민
    • 미생물학회지
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    • 제29권4호
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    • pp.250-257
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    • 1991
  • An obligate methanol-oxidizing bacterium, Methylobacillus sp. strain SK1, which grows only on methanol was isolated from soil. The isolate was nonmotile Gram-negtive rod. It does not have internal membrane system. The colonies were small, whitish-yellow, and smooth. The guanine plus cytosine content of the DNA was 48 mol%. Cellular fatty acids consisted predominantly of large amounts of straight-chain saturated $C_{16:0}$ acid and unsaturated $C_{16:1}$ acid. The major ubiquinone was Q-8, and Q-10 was present as minor component. The cell was obligately aerobic and exhibited catalase, but no oxidase, activity. Poly-.betha.-hydroxybutyrate, endospores, or cysts were not observed. the isolate could grow only on methanol in mineral medium. Growth factors were not required. The isolate was unable to use methane, formaldehyde, formate, methylamine, and several other organic compounds tested as a sole source of carbon and energy. Growth was optimal at 35.deg.C and pH 7.5. It could not grow at 42.deg.C. The doubling time was 1.2h at 30.deg.C when grown with 1.0%(v/v) methanol. The growth was not affected by antibiotics inhibiting cell wall synthesis and carbon monoxide but was completely suppressed by those inhibiting protein synthesis. Methanol was found to be assimilated through the ribulose monophosphate pathway. Cytochromes of b-, c-, and o- types were found. Cell-free extracts contained a phenazine methosulfate-linked methanol dehydrogenase activity, which required ammonium ions as an activator. Cells harvested after the late exponential phase seemed to contain blue protein.ein.

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제한통성 메탄올자화세균인 Methylovorus sp. Strain SS1의 분리 및 특성 (Isolation and Characterization of a Restricted Facultatively Methylotrophic Bacterium Methylovorus sp. Strain SS1)

  • 서성아;김영민
    • 미생물학회지
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    • 제31권3호
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    • pp.179-183
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    • 1993
  • A restricted facultatively methanol-oxidizing bacterium, Methylovorus sp. strain SS1, was isolate dfrom soil samples from Kuala Lumpur, Malaysia, through methanol-enrichment culture technique. The isolate was nonmotile Gram-negative rod and did not have complex internal membrane system. The colonies were small, pale-yellow, and raised convex with entire margin. The cell did not produce any spores and capsular materials. The cell was obligately aerobic and exhibited catalase, but no oxidase, activity. Plasmid, carotenoid pigment, and poly-.betha.-hydroxybutyric acid were not found. The guanine plus cytosine content of the DNA was 55%. The isolate was found to grow only on methanol methylamine, or glucose. Growth factors were not required. Cells growing on methanol was found to produce extracellular polysaccharides containing glucose, lactose, and fructose. Growth was optimal (t$_{d}$= 1.7) with 0.5%(v/v) methanol at 40.deg.C and pH 6.5. No Growth was observed at over 60.deg.C. Cell-free extracts of the methanol grown cells exhibited the phenazine methosulfate-linked methanol dehydrogenase activity Methanol was found to be assimilate dthrough the ribulose monophosphate pathway.y.

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Computational Drug Discovery Approach Based on Nuclear Factor-κB Pathway Dynamics

  • Nam, Ky-Youb;Oh, Won-Seok;Kim, Chul;Song, Mi-Young;Joung, Jong-Young;Kim, Sun-Young;Park, Jae-Seong;Gang, Sin-Moon;Cho, Young-Uk;No, Kyoung-Tai
    • Bulletin of the Korean Chemical Society
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    • 제32권12호
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    • pp.4397-4402
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    • 2011
  • The NF-${\kappa}B$ system of transcription factors plays a crucial role in inflammatory diseases, making it an important drug target. We combined quantitative structure activity relationships for predicting the activity of new compounds and quantitative dynamic models for the NF-${\kappa}B$ network with intracellular concentration models. GFA-MLR QSAR analysis was employed to determine the optimal QSAR equation. To validate the predictability of the $IKK{\beta}$ QSAR model for an external set of inhibitors, a set of ordinary differential equations and mass action kinetics were used for modeling the NF-${\kappa}B$ dynamic system. The reaction parameters were obtained from previously reported research. In the IKKb QSAR model, good cross-validated $q^2$ (0.782) and conventional $r^2$ (0.808) values demonstrated the correlation between the descriptors and each of their activities and reliably predicted the $IKK{\beta}$ activities. Using a developed simulation model of the NF-${\kappa}B$ signaling pathway, we demonstrated differences in $I{\kappa}B$ mRNA expression between normal and different inhibitory states. When the inhibition efficiency increased, inhibitor 1 (PS-1145) led to long-term oscillations. The combined computational modeling and NF-${\kappa}B$ dynamic simulations can be used to understand the inhibition mechanisms and thereby result in the design of mechanism-based inhibitors.

새로운 절대 메탄올 산화세균의 분리 및 특성 (Characteristics of a New Obligate Methanol-Oxidizing Bacterium)

  • Kim, Si-Wook;Park, Yong-Ha
    • 미생물학회지
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    • 제31권4호
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    • pp.261-266
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    • 1993
  • 유일한 탄소 및 에어지원으로 메탄올만을 이용하여 성장하는 새로운 절대 메탄올 자화세균을 토양으로 부터 분리하였다. 분리균주는 그람음성의 운동성이 없고 포자를 형성하지 않는 간균으로 정대호기성 세균이었다. 이 균주는 catalase 활성과 oxidase 활성을 가지고 있으며, nitrate를 nitrite로 환원시킬 수 있고 성장시 vitamin이나 특이한 생육인자를 요구하지 않았다. 세대시간은 1.6시간으로 메탄올 동화경로로는 ribulose monophosphate pathway(Entner-Doudoroff 변형경로)를 이용하나 α-ketoglutarate dehydrogenase 활성은 없었다. Ammonium ion은 glutamate dehydrogenase를 이용하여 동화하였다. DNA의 guanine plus cytosine 함량은 61.0 mol%이고 세포내 지방산으로는 누고 straight-chain saturated C$^{16:0}$ acids(palmitie acids)와 unsaturated C$^{16:1}$ acids(palmitoleic acids)를 가지고 있으나 이외에도 두 종류의 unidentified C$_{17}$ branched fatty acid도 포함하고 있었다. Major ubiquinone은 Q-8이나 Q-6와 Q-7을 특이하게 소량 가지고 있었다. Phospatidylethanolamine과 Phosphatidylglycerol이 주요한 phospholip의 구성물질이나 diphosphatidylgycerol도 소량 포함하고 있었다. 위와같은 생리적, 생화학적 자료로 부터 분리균주를 새로은 종 즉, Methylohacillus methanolovorus sp. nov.로 명명하였다.

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Heteroexpression and Functional Characterization of Glucose 6-Phosphate Dehydrogenase from Industrial Aspergillus oryzae

  • Guo, Hongwei;Han, Jinyao;Wu, Jingjing;Chen, Hongwen
    • Journal of Microbiology and Biotechnology
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    • 제29권4호
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    • pp.577-586
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    • 2019
  • The engineered Aspergillus oryzae has a high NADPH demand for xylose utilization and overproduction of target metabolites. Glucose-6-phosphate dehydrogenase (G6PDH, E.C. 1.1.1.49) is one of two key enzymes in the oxidative part of the pentose phosphate pathway, and is also the main enzyme involved in NADPH regeneration. The open reading frame and cDNA of the putative A. oryzae G6PDH (AoG6PDH) were obtained, followed by heterogeneous expression in Escherichia coli and purification as a his6-tagged protein. The purified protein was characterized to be in possession of G6PDH activity with a molecular mass of 118.0 kDa. The enzyme displayed maximal activity at pH 7.5 and the optimal temperature was $50^{\circ}C$. This enzyme also had a half-life of 33.3 min at $40^{\circ}C$. Kinetics assay showed that AoG6PDH was strictly dependent on $NADP^+$ ($K_m=6.3{\mu}M$, $k_{cat}=1000.0s^{-1}$, $k_{cat}/K_m=158.7s^{-1}{\cdot}{\mu}M^{-1}$) as cofactor. The $K_m$ and $k_{cat}/K_m$ values of glucose-6-phosphate were $109.7s^{-1}{\cdot}{\mu}M^{-1}$ and $9.1s^{-1}{\cdot}{\mu}M^{-1}$ respectively. Initial velocity and product inhibition analyses indicated the catalytic reaction followed a two-substrate, steady-state, ordered BiBi mechanism, where $NADP^+$ was the first substrate bound to the enzyme and NADPH was the second product released from the catalytic complex. The established kinetic model could be applied in further regulation of the pentose phosphate pathway and NADPH regeneration of A. oryzae to improve its xylose utilization and yields of valued metabolites.

Carvacrol improves blood lipid and glucose in rats with type 2 diabetes mellitus by regulating short-chain fatty acids and the GPR41/43 pathway

  • Yan Sun;Hai Qu;Xiaohong Niu;Ting Li;Lijuan Wang;Hairui Peng
    • The Korean Journal of Physiology and Pharmacology
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    • 제28권1호
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    • pp.1-10
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    • 2024
  • Type 2 diabetes mellitus (T2DM) is characterized by hyperglycemia and dyslipidemia. Carvacrol (CAR) has demonstrated the potential to mitigate dyslipidemia. This study aims to investigate whether CAR can modulate blood glucose and lipid levels in a T2DM rat model by regulating short-chain fatty acids (SCFAs) and the GPR41/43 pathway. The T2DM rat model was induced by a high-fat diet combined with low-dose streptozocin injection and treated with oral CAR and/or mixed antibiotics. Fasting blood glucose, oral glucose tolerance, and insulin tolerance tests were assessed. Serum lipid parameters, hepatic and renal function indicators, tissue morphology, and SCFAs were measured. In vitro, high glucose (HG)-induced IEC-6 cells were treated with CAR, and optimal CAR concentration was determined. HG-induced IEC-6 cells were treated with SCFAs or/and GPR41/43 agonists. CAR significantly reduced blood lipid and glucose levels, improved tissue damage, and increased SCFA levels in feces and GPR41/43 expression in colonic tissues of T2DM rats. CAR also attenuated HG-induced apoptosis of IEC-6 cells and enhanced GPR41/43 expression. Overall, these findings suggest that CAR alleviates blood lipid and glucose abnormalities in T2DM rats by modulating SCFAs and the GPR41/43 pathway.