• Proceedings of the Plant Resources Society of Korea Conference
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• 2020.08a
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• pp.57-57
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• 2020

다래(Actinidia arguta (Siebold & Zucc.) Planch. ex Miq.)의 재배에서 현재 많이 이용되고 있는 평덕형은 기존의 T덕형에 비해 가지의 배치가 자유롭고 수확량이 많은 장점이 있다. 평덕형을 활용한 다래 재배에서 결과모지의 전정 길이에 대한 연구는 미흡한 실정이며, T덕형과 마찬가지로 15cm 길이의 단초전정이 권장되어 있다. 본 연구에서는 평덕형에서 품종별로 수확량을 증대하면서 과실 품질을 향상시킬 수 있는 적정한 결과모지 길이를 결정하고자 하였다. 이를 위해 과실 특성이 다른 '오텀센스'와 '대보' 품종을 이용하여 결과모지가 30, 50, 100, 150 및 200cm 길이가 되도록 전정하고, 수확기인 9월에 수확량 및 열매 특성을 조사하였다. 평덕형의 경우 품종과 결과모지 전정길이에 따라서 가지수, 결과지의 수, 총 착과 수, 열매무게 및 총 수확량에서 유의적인 차이를 보였다. 두 품종 모두 150cm로 결과모지를 전정하였을 때 결과모지당 착과 수가 각각 129±71개 및 27±8개로 가장 좋았으며, 총 수확량 역시 각각 1,697.0±990.4g 및 849.0±243.2g으로 가장 좋았다. '오텀센스'와 '대보' 품종은 평덕재배시 결과모지를 150cm로 전정하는 것이 생산량 증대 및 품질 특성이 우수한 것으로 나타났다.

• Proceedings of the Plant Resources Society of Korea Conference
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• 2020.08a
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• pp.58-58
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• 2020

다양한 품종이 개발되어 재배되고 있는 다래(Actinidia arguta (Siebold & Zucc.) Planch. ex Miq.)의 재배유형이 T덕형과 평덕형으로 나누어지고, 덕 형태 및 품종에 따라 다래의 생육 양상에 차이가 있음에도 불구하고 결과모지 길이를 15cm 길이의 단일한 형태로 전정해 왔다. 본 연구에서는 T덕형을 활용한 다래 재배에서 품종별로 수확량을 증대하면서 과실 품질을 향상시킬 수 있는 적정한 결과모지 길이를 결정하고자 하였다. 이를 위해 국립산림과학원에서 개발한 '새한', '대성' '칠보' 및 '오텀센스' 등 4품종을 대상으로 하여 결과모지 길이가 15, 30 및 50cm가 되도록 전정하였다. 동일한 방법으로 재배한 후 수확기인 9월에 수확량 및 열매 특성을 조사하였다. 그 결과 품종과 가지수, 결과지의 수와 미결실지 수, 열매 무게, 총 수확량 에서 유의한 차이가 있었고, 전정 길이에 따라서는 총 착과 수, 열매 무게 및 총 수확량에서 차이가 있었다. 모든 품종에서 결과모지 길이가 길어질수록 총 수확량은 증가하였으며, 총 수확량은 품종에 따라 2~7배까지 증가하는 경향을 보였다. 결과모지 전정은 '새한', '대성' 및 '오텀센스'는 50cm 전정에서 칠보는 30cm 전정에서 생산량 및 품질특성이 우수하였다.

• BMB Reports
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• v.57 no.2
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• pp.79-85
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• 2024

Pre-harvest sprouting is a critical phenomenon involving germination of seeds in the mother plant before harvest under relative humid conditions and reduced dormancy. In this paper, we generated HDR mutant lines with one region SNP (C/T) and an insertion of 6 bp (GGT/GGTGGCGGC) in OsERF1 genes for pre-harvest sprouting (PHS) resistance using CRISPR/Cas9 and a geminiviral replicon system. The incidence of HDR was 2.6% in transformed calli. T₁ seeds were harvested from 12 HDR-induced calli and named ERF1-hdr line. Molecular stability, key agronomic properties, physiological properties, and biochemical properties of target genes in the ERF1-hdr line were investigated for three years. The ERF1-hdr line showed significantly enhanced seed dormancy and pre-harvest sprouting resistance. qRT-PCR analysis suggested that enhanced ABA signaling resulted in a stronger phenotype of PHS resistance. These results indicate that efficient HDR can be achieved through SNP/InDel replacement using a single and modular configuration applicable to different rice targets and other crops. This work demonstrates the potential to replace all genes with elite alleles within one generation and greatly expands our ability to improve agriculturally important traits.

• KOREAN JOURNAL OF CROP SCIENCE
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• v.45 no.4
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• pp.251-256
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• 2000

Astragalus membranaceus has flowers that are similar to that of the legume family, but shows poor bearing when self-pollination is induced. Thus, this study was carried out observing the ripening procedure of pistils and stamens and development stages of pollen in the context of the birth and growth of the flower. As to the bearing of the flower of A. membranaceus, few pod setting and 13% pod setting were observed when self-pollination is induced by paper-bag covering or artificial pollination treated respectively. The result indicates that A. membranaceus is a cross-pollination plant. A pistil grew faster than a stamen until just before blooming. The flower size was about 17.0mm$\times$4.0mm. Pistils and stamens had the same length after flowering. Pollen mother cells passed through meiosis and mitosis when its length reached around 3.5mm, thus creating the tetrade when 4 mm long. Pollen attained full growth when the bud was about 10mm long. An anther was found to tend to dehisce when the length of a bud reached around 12.0mm. As to the shape of pollen, about 70 % were normal. 1% and 30 % were small or empty pollen respectively. The result indicates that pollen of A. membranaceus attains full growth just before anther dehiscence which occurs before blooming while pistils grow faster than stamens until before flowering.

• Microbiology and Biotechnology Letters
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• v.47 no.4
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• pp.585-595
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• 2019

Analysis of bacterial communities based on their 16S rDNA sequences revealed the predominance of Proteobacteria (Aeromonas sp., Acinetobacter sp. and Thaueraamino aromatica sp.) and uncultured bacterium in activated sludge from the effluent treatment plant (ETP) of Mother Dairy, Calcutta (India). Each isolate was used for bioremediation of dairy wastewater with simultaneous conversion of nitrogenous pollutants into ammonia. A consortium developed using seven of these isolates and three Bacillus strains from different environmental origins could reduce 93% nitrate with simultaneous production of ammonia (626 ㎍/100 ml) within 20 h in non-aerated, immobilized conditions as compared to 82% nitrate reduction producing 2.4 ㎍/100 ml ammonia in 96 h with extensive aeration in a conventional ETP. The treated ammonia-rich effluent could be used instead of freshwater and fertilizer during cultivation of mung bean with 1.6-fold increase in grain yield. The ETP with the surrounding agricultural land makes this process a zero liquid discharge technology for using the biofertilizer generated. In addition, the process requires minimal energy supporting sustained environmental health. This method is thus proposed as an alternative approach for small-scale dairy ETPs.

• Journal of Korean Society of Forest Science
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• v.84 no.2
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• pp.207-217
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• 1995

Various factors reducing seed yield in 4 Larix species throughout the whole reproductive cycle were investigated and partitionate losses attributed to them were determined. Pollen quality, lack of pollination, and degeneration of female gametophyte played minor roles in reducing seed yield. Failure of pollinated ovules to be fertilized was an important factor causing seed loss. Embryo degeneration was also a major factor causing seed loss in all 4 species. Strobili abortion, which causes loss of all potential seeds in a cone, was the most important factor in reducing seed loss in this study. Based on the results obtained from this studs, hybridizations in either direction between European larch and Japanese larch are likely to resulting viable seed. However, hybridization between tamarack as a mother tree and European larch are not likely to result in viable seeds being produced.

• Applied Microscopy
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• v.43 no.4
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• pp.140-145
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• 2013

Structural aspects of highly reduced vegetative organs in the aquatic Spirodela polyrhiza were examined using scanning and transmission electron microscopy. The study focused mainly on young and mature fronds with turions and their cellular features were compared. Mature fronds were composed of thin-walled chlorenchyma with highly vacuolated cells; most of which were frequently occupied by either tanniferous deposits or various crystals. Fronds of photoautotrophic offspring were produced from the meristematic region of the reproductive pockets within mother fronds, where they remained until separation. Moderate degrees of wall ingrowth and plasmalemma proliferation were detected briefly in the epidermis of daughter fronds during early development. Vascular tissues were generally much reduced, but air chambers were well-established in fronds. Chloroplasts having grana with several thylakoids were distributed throughout the plant, but starch grains were encountered frequently in the mesophyll chloroplasts of younger fronds and initial stage of the turion. Their cytoplasm was dense with small vacuoles in most cases. Further, big starch grains, up to several microns, occupying most of the plastid volume were formed in the turion prior to sink for overwintering. Plasmodesmata were numerous in the examined tissues, except mature turions, suggesting a symplastic pathway of the metabolites within body.

• Journal of Bio-Environment Control
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• v.27 no.2
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• pp.140-146
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• 2018

This research was conducted to determine the influence of incorporation levels of sulfur into a coir dust+pine bark medium (1:1, v/v) on the changes in the bicarbonate ($HCO_3{^-}$) concentrations and pH of soil solution, crop growth, and nutrient uptake of 'Ssanta' strawberry. In the preparing of the mixed medium, sulfur powder was added with the rate of 0 (control), 0.23, 0.45, 0.90, and $1.80g{\cdot}L^{-1}$ and Hoagland nutrient solution containing $240mg{\cdot}L^{-1}$ $HCO_3{^-}$ was supplied during the crop cultivation. The growth measurements and tissue analysis for the determination of nutrient contents were carried out 140 days after solution application and the soil solution analysis was performed every two weeks. As the level of sulfur was elevated, the overall growth of mother plants became better showing that the growth indexes except chlorophyll contents were the lowest in control treatment but the statistical differences were not found among the three treatments of $0.45g{\cdot}L^{-1}$ or higher sulfur. The higher the levels of sulfur incorporation, the higher the occurrence of runners and the growth of daughter plants. The length of the runners and the number of daughter plants occurred per mother plants were higher in the treatments of 0.90 and $1.80g{\cdot}L^{-1}$ than the three treatments of 0, 0.23, and $0.45g{\cdot}L^{-1}$, but the statistical differences were not observed between the 0.90 and $1.80g{\cdot}L^{-1}$ treatments. The rose of pH and $HCO_3{^-}$ concentrations in soil solution of root media continued all the cropping period, but those decreased slightly in the treatments of $0.90g{\cdot}L^{-1}$ or higher. The soil solution concentrations of $K^+$ and $PO_4{^3-}$ in the treatments of 0.90 and $1.80g{\cdot}L^{-1}$ was lower than those in other treatments and the statistical differences in the $Ca^{2+}$ and $Mg^{2+}$ concentrations were not observed among all treatments. The nutrient contents in tissue analyzed in this experiment were the lowest in the control treatments and those increased as incorporation rates of sulfur were elevated. Above results indicated that when 'Ssanta' strawberry is grown hydroponically and the root medium is coir dust and the pine bark (5:5, v/v) mix, the sulfur incorporation rate as pre-planting fertilizer has to be higher than $0.9g{\cdot}L^{-1}$ root medium to reduce the $HCO_3{^-}$ injury.

• Proceedings of the Korean Society of Crop Science Conference
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• 2017.06a
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• pp.20-20
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• 2017

Plant genomes include heterochromatic loci that consist of repetitive sequences and transposable elements. LTR retrotransposon is the major class of transposons in advanced plants in terms of proportion in plant genome. The elements contribute not only to genome size but also to genome stability and gene expression. A number of cases have been reported transposon insertions near genic regions affect crop traits such as fruit pigments, stress tolerance, and yields. Functional LTR retrotransposons produce extrachromosomal DNA from genomic RNA by reverse transcription that takes place within virus-like-particles (VLPs). DECREASED DNA METHYLATION 1 (DDM1) plays important roles in maintaining DNA methylation of heterochromatin affecting all sequence contexts, CG, CHG, and CHH. Previous studies showed that ddm1 mutant exhibits massive transcription of retrotransposons in Arabidopsis, but only few of them were able to create new insertions into the genome. RNA-dependent RNA POLYMERASE 6 (RDR6) is known to function in restricting accumulation of transposon RNA by processing the transcripts into 21-22 nt epigenetically activated small interfering RNA (easiRNA). We purified VLPs and sequence cDNA to identify functional LTR retrotransposons in Arabidopsis ddm1 and ddm1rdr6 plants. Over 20 LTR copia and gypsy families were detected in ddm1 and ddm1rdr6 sequencing libraries and most of them were not reported for mobility. In ddm1rdr6, short fragments of ATHILA gypsy elements were detected. It suggests easiRNAs might regulate reverse transcription steps. The highest enriched element among transposon loci was previously characterized EVADE element. It has been reported that active EVADE element is more efficiently silenced through female germline than male germline. By genetic analyses, we found ddm1 and rdr6 mutation affect maternal silencing of active EVADE elements. DDM1-GFP protein accumulated in megaspore mother cell but was not found in mature egg cell. The fusion protein was also found in early embryo and maternal DDM1-GFP allele was more dominantly expressed in the embryo. We observed localization of DDM1-GFP in Arabidopsis and DDM1-YFP in maize and found the proteins accumulated in dividing zone of root tips. Currently we are looking at cell cycle dependency of DDM1 expression using maize system. Among 10 AGO proteins in Arabidopsis, AGO9 is specifically expressed in egg cell and shoot meristematic cells. In addition, mutation of AGO9 and RDR6 caused failure in maternal silencing, implying 21-22 nt easiRNA pathway is important for retrotransposon silencing in female gametophyte or/and early embryo. On the other hand, canonical 24 nt sRNA-directed DNA methylation (RdDM) pathways did not contribute to maternal silencing as confirmed by this study. Heat-activated LTR retrotransposon, ONSEN, was not silenced by DDM1 but the silencing mechanisms require RdDM pathways in somatic cells. We will propose distinct mechanisms of LTR retrotransposons in germline and somatic stages.

• Proceedings of the Korean Society of Crop Science Conference
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• 2017.06a
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• pp.97-97
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• 2017

Plant genomes include heterochromatic loci that consist of repetitive sequences and transposable elements. LTR retrotransposon is the major class of transposons in advanced plants in terms of proportion in plant genome. The elements contribute not only to genome size but also to genome stability and gene expression. A number of cases have been reported transposon insertions near genic regions affect crop traits such as fruit pigments, stress tolerance, and yields. Functional LTR retrotransposons produce extrachromosomal DNA from genomic RNA by reverse transcription that takes place within virus-like-particles (VLPs). DECREASED DNA METHYLATION 1 (DDM1) plays important roles in maintaining DNA methylation of heterochromatin affecting all sequence contexts, CG, CHG, and CHH. Previous studies showed that ddm1 mutant exhibits massive transcription of retrotransposons in Arabidopsis, but only few of them were able to create new insertions into the genome. RNA-dependent RNA POLYMERASE 6 (RDR6) is known to function in restricting accumulation of transposon RNA by processing the transcripts into 21-22 nt epigenetically activated small interfering RNA (easiRNA). We purified VLPs and sequence cDNA to identify functional LTR retrotransposons in Arabidopsis ddm1 and ddm1rdr6 plants. Over 20 LTR copia and gypsy families were detected in ddm1 and ddm1rdr6 sequencing libraries and most of them were not reported for mobility. In ddm1rdr6, short fragments of ATHILA gypsy elements were detected. It suggests easiRNAs might regulate reverse transcription steps. The highest enriched element among transposon loci was previously characterized EVADE element. It has been reported that active EVADE element is more efficiently silenced through female germline than male germline. By genetic analyses, we found ddm1 and rdr6 mutation affect maternal silencing of active EVADE elements. DDM1-GFP protein accumulated in megaspore mother cell but was not found in mature egg cell. The fusion protein was also found in early embryo and maternal DDM1-GFP allele was more dominantly expressed in the embryo. We observed localization of DDM1-GFP in Arabidopsis and DDM1-YFP in maize and found the proteins accumulated in dividing zone of root tips. Currently we are looking at cell cycle dependency of DDM1 expression using maize system. Among 10 AGO proteins in Arabidopsis, AGO9 is specifically expressed in egg cell and shoot meristematic cells. In addition, mutation of AGO9 and RDR6 caused failure in maternal silencing, implying 21-22 nt easiRNA pathway is important for retrotransposon silencing in female gametophyte or/and early embryo. On the other hand, canonical 24 nt sRNA-directed DNA methylation (RdDM) pathways did not contribute to maternal silencing as confirmed by this study. Heat-activated LTR retrotransposon, ONSEN, was not silenced by DDM1 but the silencing mechanisms require RdDM pathways in somatic cells. We will propose distinct mechanisms of LTR retrotransposons in germline and somatic stages.