• Title/Summary/Keyword: morphological filter

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Analysis of Mycological Characteristics and Lignocellulose Degradation of Gyrodontium sacchari (헌구두솔버섯균의 균학적 특성 및 목질계 섬유소의 분해 특성 분석)

  • Park, In-Cheol;Seok, Soon-Ja;Kim, Jeong-Seon;Yoo, Jae-Hong;Ahn, Jae-Hyung
    • The Korean Journal of Mycology
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    • v.43 no.4
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    • pp.239-246
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    • 2015
  • Two fungal strains were isolated from rods of Quercus sp. (NAAS02335) and Pinus densiflora (NAAS05299) in Korea. These strains were identified as Gyrodontium sacchari by their morphological and mycological characteristics. The optimal growth temperature of NAAS02335 and NAAS05299 are $25^{\circ}C$ and $30^{\circ}C$, respectively. Production of cellulase, xylanase, and ligninase was tested on agar media supplemented dyes or substrates. Production of cellulase and xylanase of NAAS05299 was higher than those of NAAS02335, however ligninase activity of NAAS02335 was higher than that of NAAS05299. The activities of cellulase, xylanase, and amylase of strain NAAS05299 were estimated at 6.7~10.2 times higher than that of NAAS02335. Laccase activity was only estimated by strain NAAS02335. The lignocellulytic enzymes are induced by substrates such as rice straw, wooden chips of pine, oak, and poplar. The NAAS05299 was able to degrade filter paper completely after 4 weeks of culturing in liquid media containing a piece of filter paper at $28^{\circ}C$ with continuous shaking. NAAS05299 was able to degrade rice straw, pine chips, and oak chips after 4 months in solid culture, however NAAS02335 decomposed only rice straw among tested 4 kinds of biomass.

Effect of a Heavy-lon Beam Irradiation on Anthers, Calli and Seeds of Tobacco (Nicotiana tabacum L. cv. BY-4) (중이온 Beam 조사가 담배 (Nicotiana tabacum L. cv. BY-4)의 약과 캘러스 및 종자에 미치는 영향)

  • ;Abe Tomoko
    • Korean Journal of Plant Tissue Culture
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    • v.27 no.2
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    • pp.109-115
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    • 2000
  • Effects of the heavy-ion ($^{14}$ N or $^{20}$ Ne) beam irradiation on the response of anthers, growth of calli, germination of seeds, and the early growth after the germination of tobacco (Nicotiana tabacum L. cv. BY-4) were investigated. Anthers precultured for 10 days before the irradiation became brown without callus or shoot induction over 20 Gy of $^{14}$ N and $^{20}$ Ne ion beam irradiation. Relative growth rate of the cultured calli was reduced by the irradiation and became brown significantly 2 weeks after the $^{14}$ N and $^{20}$ Ne ion beam irradiation over 50 Gy. The increased intensity of the heavy-ion ($^{14}$ N, $^{20}$ Ne) beam irradiation resulted in the delay of seed germination and the inhibition of the early growth both in water-treated and non-treated seeds before the irradiation. In addition, the heavy-ion beam irradiation to the imbibed seeds inhibited seed germination more than that to the non-imbibed seeds. The screening approach of non-imbibed seeds with heavy-ion beam irradiation using in vitro culture system was more useful than the filter-paper germination method in investigating the characteristics of heavy-ion beam-irradiated seed population and the screening of morphological variants at the early stage of the plant growth.

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Evaluation of Extended Canine Semen after Different Filtration Treatment (개 희석 정액의 다양한 filtration 처리 후 정자평가)

  • Kim, Yong-Jun;Kim, Jin-Young;Kim, Sue-Hee;Lee, Young-Jun
    • Journal of Veterinary Clinics
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    • v.24 no.4
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    • pp.577-583
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    • 2007
  • It is important to obtain semen with good quality for efficient fertilization and pregnancy. To obtain these semen, various methods have been developed but most of these methods are time consuming and require costly equipment. Therefore, the objective of this research is to investigate the usability of column filtration system as quick and simple method to get sperm with better quality. Ejaculates were obtained from 5 dogs and analyzed with basic quality parameters before each filtration. Sperm concentration was adjusted to $5{\times}10^7/ml$ after dilution. The experimental groups were divided into non-filtered group(control) and filtered groups(glass wool, Sephadex 5% and Sephadex 20%). Ejaculates were filtered through each filter system and assessed by recovery rate of sperm, motility, normal morphology, CFDA/PI stain and plasma membrane integrity(hypo-osmotic swelling test, HOST). The lowest recovery rate of spermatozoa was recorded in glass wool filtration group, followed by 20% Sephadex filtration group(p<0.05). There was no significant difference between control(non-filtered) and 5% Sephadex filtration poop. Also, there was no significant difference of sperm motility assessed under light microscope among experimental groups. Morphological normality of canine spermatozoa was the highest in the glass wool filtration group and the lowest in the 5% Sephadex filtration group with no significant differences versus 20% Sephadex filtration and control group, respectively(p<0.05). Viability of canine sperm assessed by CFCA/PI staining was the highest in the glass wool filtration poop with no significant difference versus the control group, and the lowest in the 20% Sephadex filtration group with no significant difference versus 5% Sephadex filtration group, respectively(p<0.05). HOS values of canine sperm was the highest in the 20% Sephadex filtration group with no significant difference versus 5% Sephadex filtration group, and the lowest in the control poop with no significant difference versus glass wool filtration group, respectively(p<0.05). Therefore, these results indicated that filtration treatment for extended canine sperm would be useful method to get sperm with better quality by trapping the damaged sperm, consequently filter would be physical barrier against injured or immotile sperm.

Simulation of the Blood Pressure Estimation Using the Artery Compliance Model and Pulsation Waveform Model

  • Jeon, Ahyoung;Ro, Junghoon;Kim, Jaehyung;Baik, Seongwan;Jeon, Gyerok
    • Journal of Sensor Science and Technology
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    • v.22 no.1
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    • pp.38-43
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    • 2013
  • In this study, the artery's compliance model and the pulsation waveform model was proposed to estimate blood pressure without applying HPF (High Pass Filter) on signal measured by the oscillometric method. The method proposed in the study considered two ways of estimating blood pressure. The first method of estimating blood pressure is by comparing and analyzing changes in pulsation waveform's dicrotic notch region during each cardiac period. The second method is by comparing and analyzing morphological changes in the pulsation waveform during each cardiac period, which occur in response to the change in pressure applied on the cuff. To implement these methods, we proposed the compliance model and the pulsation waveform model of the artery based on hemodynamic theory, and then conducted various simulations. The artery model presented in this study only took artery's compliance into account. Then, a pulsation waveform model was suggested, which uses characteristic changes in the pulsation waveform to estimate blood pressure. In addition, characteristic changes were observed in arterial volume by applying artery's pulsation waveform to the compliance model. The pulsation waveform model was suggested to estimate blood pressure using characteristic changes of the pulsation waveform in the arteries. This model was composed of the sum of sine waves and a Fourier's series in combination form up to 10th harmonics components of the sinusoidal waveform. Then characteristic of arterial volume change was observed by inputting pulsation waveform into the compliance model. The characteristic changes were also observed in the pulsation waveform by mapping the arterial volume change in accordance with applied cuff's pressure change to the pulsation waveform's change according to applied pressure changes by cuff. The systolic and diastolic blood pressures were estimated by applying positional change of pulsation waveform's dicrotic notch region.

A Segmentation Method for Counting Microbial Cells in Microscopic Image

  • Kim, Hak-Kyeong;Lee, Sun-Hee;Lee, Myung-Suk;Kim, Sang-Bong
    • Transactions on Control, Automation and Systems Engineering
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    • v.4 no.3
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    • pp.224-230
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    • 2002
  • In this paper, a counting algorithm hybridized with an adaptive automatic thresholding method based on Otsu's method and the algorithm that elongates markers obtained by the well-known watershed algorithm is proposed to enhance the exactness of the microcell counting in microscopic images. The proposed counting algorithm can be stated as follows. The transformed full image captured by CCD camera set up at microscope is divided into cropped images of m$\times$n blocks with an appropriate size. The thresholding value of the cropped image is obtained by Otsu's method and the image is transformed into binary image. The microbial cell images below prespecified pixels are regarded as noise and are removed in tile binary image. The smoothing procedure is done by the area opening and the morphological filter. Watershed algorithm and the elongating marker algorithm are applied. By repeating the above stated procedure for m$\times$n blocks, the m$\times$n segmented images are obtained. A superposed image with the size of 640$\times$480 pixels as same as original image is obtained from the m$\times$n segmented block images. By labeling the superposed image, the counting result on the image of microbial cells is achieved. To prove the effectiveness of the proposed mettled in counting the microbial cell on the image, we used Acinetobacter sp., a kind of ammonia-oxidizing bacteria, and compared the proposed method with the global Otsu's method the traditional watershed algorithm based on global thresholding value and human visual method. The result counted by the proposed method shows more approximated result to the human visual counting method than the result counted by any other method.

Development of recombinant human chorionic gonadotropin (hCG) using high-density culture technique of suspension-adapted chinese hamster ovary (CHO) cells

  • Na, Kyu-Heum;Kim, Seung-Chul;Seo, Kwang-Seok;Lee, Sung-Hee;Kang, Soo-Hyung
    • 한국생물공학회:학술대회논문집
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    • 2005.04a
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    • pp.37-37
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    • 2005
  • Human chorionic gonadotropin (hCG) is a heterodimeric glycoprotein hormone consisting of non-covalently linked two subunits, the ${\alpha}$ and ${\beta}$ subunit. It has been used as a infertility drug for ovulation to mimic luteinizing hormone $(LH).^{1)}$ A stable cell line was established by transfection of Rc/CMV-i-dhfr-hCG, expression vector containing hCG ${\alpha}-$ and ${\beta}-genes$, into dihydrofolate reductase-deficient CHO cells and subesquent methotrexate-mediated gene amplification. Anchorage-dependent CHO cells were adapted into a serum-free and/or animal component-free suspension medium through gradual serum weaning for the hCG production. The established cell line showed typical morphological characteristics and growth profile of CHO cells, and could produce FSH with passage-to-passage consistency. The high density perfusion culture of the CHO cells was carried out in Celligen Plus bioreactor equipped with a spin-filter as a internal cell retention device. The cell density reached up to $>1x10^{7}$ cells/ml in less than 7 days and a perfusion-control strategy based on cellular consumption rates of glucose was $established.^{2)}$ Biologically active recombinant hCG was purified by a series of chromatographic steps including anion exchange chromatography and hydrophobic interaction chromatography to homogeneity. The highly purified recombinant hCG was characterized for physicochemical, immunological and biological properties.

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Intensity Correction of 3D Stereoscopic Images Using Binarization-Based Region Segmentation (이진화기반 영역분할을 이용한 3D입체영상의 밝기보정)

  • Kim, Sang-Hyun;Kim, Jeong-Yeop
    • The KIPS Transactions:PartB
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    • v.18B no.5
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    • pp.265-270
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    • 2011
  • In this paper, we propose a method for intensity correction using binarization-based region segmentation in 3D stereoscopic images. In the proposed method, 3D stereoscopic right image is segmented using binarizarion. Small regions in the segmented image are eliminated. For each region in right image, a corresponding region in left image is decided through region matching using correlation coefficient. When region-based matching, in order to prevent overlap between regions, we remove a portion of the area closed to the region boundary using morphological filter. The intensity correction in left and right image can be performed through histogram specification between the corresponding regions. Simulation results show the proposed method has the smallest matching error than the conventional method when we generate the right image from the left image using block based motion compensation.

Autonomous Battle Tank Detection and Aiming Point Search Using Imagery (영상정보에 기초한 전차 자율탐지 및 조준점탐색 연구)

  • Kim, Jong-Hwan;Jung, Chi-Jung;Heo, Mira
    • Journal of the Korea Society for Simulation
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    • v.27 no.2
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    • pp.1-10
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    • 2018
  • This paper presents an autonomous detection and aiming point computation of a battle tank by using RGB images. Maximally stable extremal regions algorithm was implemented to find features of the tank, which are matched with images extracted from streaming video to figure out the region of interest where the tank is present. The median filter was applied to remove noises in the region of interest and decrease camouflage effects of the tank. For the tank segmentation, k-mean clustering was used to autonomously distinguish the tank from its background. Also, both erosion and dilation algorithms of morphology techniques were applied to extract the tank shape without noises and generate the binary image with 1 for the tank and 0 for the background. After that, Sobel's edge detection was used to measure the outline of the tank by which the aiming point at the center of the tank was calculated. For performance measurement, accuracy, precision, recall, and F-measure were analyzed by confusion matrix, resulting in 91.6%, 90.4%, 85.8%, and 88.1%, respectively.

Isolation and Characterization of an Alkalophilic Cellulolytic Bacterium Pseudomonas sp. (호알칼리성 섬유소분해세균 Pseudomonas sp.의 분리 및 특성)

  • Lim, Sang-Ho;Yoon, Min-Ho;Choi, Woo-Young
    • Korean Journal of Agricultural Science
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    • v.25 no.1
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    • pp.124-130
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    • 1998
  • An alkalophilic bacterium, the strain AC-711 as a potent producer of alkaline cellulase, was selected among many isolates from soil environments. Morphological, physiological and chemical characteristics of the strain AC-711 suggested that it belongs to the genus Pseudomonas according to the Bergey's Manual of Systematic Bacteriology, however the G+C mol% (54.43) of its chromosomal DNA is lower than the normal values of the genus. The major cell wall fatty acids were determined as 15:0 and 17:0 anteiso. The production of alkaline CMCase by the strain was maximal when grown on the mediun containing 1% carboxymethyl cellulose, 0.1% $KH_2PO_4$, 0.02% $CoCl_2$, 0.02% Tween 80, 0.5% $Na_2CO_3$, 0.8% yeast extract, pH 10.3 at $30^{\circ}C$ for 3 days, and the most of enzyme was excreted into culture mediun.

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Object Detection Algorithm in Sea Environment Based on Frequency Domain (주파수 도메인에 기반한 해양 물표 검출 알고리즘)

  • Park, Ki-Tae;Jeong, Jong-Myeon
    • Journal of the Korean Institute of Intelligent Systems
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    • v.22 no.4
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    • pp.494-499
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    • 2012
  • In this paper, a new method for detecting various objects that can be risks to safety navigation in sea environment is proposed. By analysing Infrared(IR) images obtained from various sea environments, we could find out that object regions include both horizontal and vertical direction edges while background regions of sea surface mainly include vertical direction edges. Therefore, we present an approach to detecting object regions considering horizontal and vertical edges. To this end, in the first step, image enhancement is performed by suppressing noises such as sea glint and complex clutters using a statistical filter. In the second step, a horizontal edge map and a vertical edge map are generated by 1-D Discrete Cosine Transform technique. Then, a combined map integrating the horizontal and the vertical edge maps is generated. In the third step, candidate object regions are detected by a adaptive thresholding method. Finally, exact object regions are extracted by eliminating background and clutter regions based on morphological operation.