• Title/Summary/Keyword: molecular distribution

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Preparation of Diacylglycerol from Lard by Enzymatic Glycerolysis and Its Compositional Characteristics

  • Diao, Xiaoqin;Guan, Haining;Kong, Baohua;Zhao, Xinxin
    • Food Science of Animal Resources
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    • v.37 no.6
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    • pp.813-822
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    • 2017
  • The aim of this study was to prepare diacylglycerol (DAG) by enzymatic glycerolysis of lard. The effects of reaction parameters such as lipase type, reaction temperature, enzyme amount, substrate molar ratio (lard/glycerol), reaction time, and magnetic stirring speed were investigated. Lipozyme RMIM was found to be a more active biocatalyst than Novozym 435, and the optimal reaction conditions were 14:100 (W/W) of enzyme to lard substrate ratio, 1:1 of lard to glycerol molar ratio, and 500 rpm magnetic stirring speed. The reaction mixture was first incubated at $65^{\circ}C$ for 2 h and then transferred to $45^{\circ}C$ for 8 h. At the optimum reaction conditions, the conversion rate of triacylglycerol (TAG) and the content of DAG in the reaction mixture reached 76.26% and 61.76%, respectively, and the DAG content in purified glycerolized lard was 82.03% by molecular distillation. The distribution of fatty acids and Fourier transform infrared spectra in glycerolized lard samples were similar to those in lard samples. The results revealed that enzymatic glycerolysis and molecular distillation can be used to prepare more highly purified DAG from lard.

Chemical Differentiation of CS and N2H+ in Starless Dense Cores

  • Kim, Shinyoung;Lee, Chang Won;Sohn, Jungjoo;Kim, Gwanjeong;Kim, Mi-Ryang
    • The Bulletin of The Korean Astronomical Society
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    • v.43 no.1
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    • pp.45.2-45.2
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    • 2018
  • CS molecule is known to be adsorbed onto dust in cold dense cores, causing its significant depletion in the center region of cores. This study is aimed to investigate the depletion of CS molecule with optically thin $C^{34}S$ molecular line observations, including significance of its differentiation depending on the evolutionary status of the dense cores. We mapped five evolved starless cores, L1544, L1552, L1689B, L694-2 and L1197 using two molecular lines, $C^{34}S$ (J=2-1) and $N_2H^+$ (J=1-0) with NRO 45 m telescope. The $H^2$ column density and temperature structures of each targets were obtained by SED fitting for Herschel continuum images and the internal number density profiles by model fitting. All of the integrated intensity maps of $C^{34}S$ show depletion holes and 'semi-ring-like' distribution, indicating that the depletion of CS is clear and general. The radial profiles of CS abundance also show significant decrease towards the core center, while $N_2H^+$ abundance is almost constant or enhanced. We find that the more evolved cores with higher $H^2$ density tend to have a stronger depletion of CS. Our data strongly support claims that CS molecule generally depletes out in the central regions of starless dense cores and such chemical differentiation is closely related to their evolution.

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Change of the Scientific Name for Piked Dogfish in Korea to Squalus suckleyi (Squalidae, Chondrichthyes) Based on Morphological and Molecular Comparisons of Squalus acanthias from New Zealand (뉴질랜드 곱상어속 어류, Squalus acanthias와의 형태 및 분자 비교에 의한 한국산 "곱상어"의 Squalus suckleyi (돔발상어과, 연골어강)로의 학명 변경)

  • Lee, Woo Jun;Kim, Seong Yong;Kim, Jin-Koo
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.49 no.4
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    • pp.493-498
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    • 2016
  • Squalus acanthias has been considered the valid scientific name for piked dogfish by many taxonomists, although others recognize two valid species, Squalus suckleyi and S. acanthias, based on differences in the numbers of precaudal vertebrae and their distribution. We compared Korean piked dogfish with S. acanthias from New Zealand using morphological and molecular methods to elucidate the taxonomy. The Korean piked dogfish was distinguished from S. acanthias from New Zealand by the number of precaudal vertebrae (70-75 in the former vs. 77-80 in the latter) and 540 base pairs in the mitochondrial DNA cytochrome c oxidase subunit I sequence (genetic distance: 0.007-0.013). Therefore, we suggest that the scientific name of the Korean piked dogfish be changed from S. acanthias to S. suckleyi.

Identification of troglitazone responsive genes: induction of RTP801 during troglitazone-induced apoptosis in Hep 3B cells

  • Kim, Jin-Oh;Kim, Ji-Young;Kwack, Mi-Hee;Hong, Su-Hyung;Kim, Moon-Kyu;Kim, Jung-Chul;Sung, Young-Kwan
    • BMB Reports
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    • v.43 no.9
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    • pp.599-603
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    • 2010
  • Troglitazone is an anti-diabetic agent that improves hyperglycemia by reducing peripheral insulin resistance in type II diabetic patients. Troglitazone has been shown to cause growth inhibition of various normal and cancerous cells. However, the molecular mechanism by which troglitazone affects the growth of these cancer cells remains unclear. Here, we report that troglitazone treatment of Hep 3B human hepatocellular carcinoma cells resulted in dose-dependent growth inhibition. Analysis of cell cycle distribution by flow cytometry showed that the number of apoptotic cells was increased in a dose-dependent manner in response to troglitazone treatment. cDNA microarray analysis showed a number of differentially expressed genes in response to troglitazone. Among the upregulated genes, hypoxia-inducible factor 1 (HIF-1)-responsive RTP801 was induced in a dose-dependent manner. We also observed HIF-1 accumulation by immnocytochemistry after troglitazone treatment. These results strongly suggest that RTP801 might be involved in troglitazone-induced apoptosis in Hep 3B cells.

First Principles Study on Hydrolysis of Hazardous Chemicals PCl3 and POCl3 Catalyzed by Water Molecules (제일원리 계산을 통한 유해화학물질 PCl3와 POCl3의 물분자 촉진 수화반응 연구)

  • Jeong, Hyeon-Uk;Gang, Jun-Hui;Jeon, Ho-Je;Han, Byeong-Chan
    • Proceedings of the Korean Institute of Surface Engineering Conference
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    • 2017.05a
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    • pp.126-126
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    • 2017
  • Using first principles calculations we unveil fundamental mechanism of hydrolysis reactions of two hazardous chemicals $PCl_3$ and $POCl_3$ with molecular water clusters nearby. It is found that the water molecules play a key role as a catalyst significantly lowing the activation barriers by transferring its protons to the reaction intermediates. Interestingly, torsional angles of molecular complexes at transition states are identified as a vital descriptor on the reaction rate. Analysis of charge distribution over the complexes further reinforces the finding with atomic level correlation between the torsional angle and variation of the orbital hybridization state of P in the complex. Electronic charge separation (or polarization) enhances thermodynamic stability of the activated complex at transition state and reduces the activation energy through hydrogen bonding network with water molecules nearby. Calculated potential energy surfaces (PES) for the hydrolysis reactions of $PCl_3$ and $POCl_3$ depict their two contrastingly different profiles of double- and triple-deep wells, respectively. It is ascribed to the unique double-bonding O=P in the $POCl_3$. Our results on the activation free energy show well agreements with previous experimental data within $7kcalmol^{-1}$ deviation.

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Hexavalent Chromium Reduction by Bacteria from Tannery Effluent

  • Batool, Rida;Yrjala, Kim;Hasnain, Shahida
    • Journal of Microbiology and Biotechnology
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    • v.22 no.4
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    • pp.547-554
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    • 2012
  • Chromium is generated from several industrial processes. It occurs in different oxidation states, but Cr(III) and Cr(VI) are the most common ones. Cr(VI) is a toxic, soluble environmental contaminant. Some bacteria are able to reduce hexavalent chromium to the insoluble and less toxic Cr(III), and thus chromate bioremediation is of considerable interest. An indigenous chromium-reducing bacterial strain, Rb-2, isolated from a tannery water sample, was identified as Ochrobactrum intermedium, on the basis of 16S rRNA gene sequencing. The influence of factors like temperature of incubation, initial concentration of Cr, mobility of bacteria, and different carbon sources were studied to test the ability of the bacterium to reduce Cr(VI) under variable environmental conditions. The ability of the bacterial strain to reduce hexavalent chromium in artificial and industrial sewage water was evaluated. It was observed that the mechanism of resistance to metal was not due to the change in the permeability barrier of the cell membrane, and the enzyme activity was found to be inductive. Intracellular reduction of Cr(VI) was proven by reductase assay using cell-free extract. Scanning electron microscopy revealed chromium precipitates on bacterial cell surfaces, and transmission electron microscopy showed the outer as well as inner distribution of Cr(VI). This bacterial strain can be useful for Cr(VI) detoxification under a wide range of environmental conditions.

Molecular Cloning and Tissue-specific Expression of the Melanocortin 4 Receptor Gene from Olive Flounder, Paralichthys olivaceus

  • Lee, Hye-Jung;Kim, Jong-Myoung
    • Fisheries and Aquatic Sciences
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    • v.13 no.4
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    • pp.263-271
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    • 2010
  • G protein-coupled receptors (GPCR) constitute the largest superfamily of cell membrane receptors, mediating diverse signal-transduction pathways. The melanocortin 4 receptor (MC4R) has been of interest for its physiological role and size, one of the smallest among the GPCRs, which makes it a good model system for the structural study of GPCRs. To study the molecular structure and tissue-specific expression of MC4R in olive flounder (Paralichthys olivaceus), the full-length MC4R gene was obtained using PCR amplification of genomic DNA as well as cDNA synthesis. Sequence analysis of the gene indicates that 978 bp of the MC4R gene encodes 325 amino acids without introns. Sequence alignment with the MC4Rs from other fish shows the highest degree of identity (96%) between Paralichthys olivaceous and Verasper moseri, followed by Takifugu rubripes and Tetraodon nigroviridis (89%). RNA was isolated from various tissues to examine the tissue distribution of MC4R by using RT-PCR. The results showed major expression of MC4R in the liver, brain, and eye, which is consistent with the expression pattern in other fish belonging to the order Pleuronectiformes.

Molecular Analysis of Anisakis Type I Larvae in Marine Fish from Three Different Sea Areas in Korea

  • Sohn, Woon-Mok;Kang, Jung-Mi;Na, Byoung-Kuk
    • Parasites, Hosts and Diseases
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    • v.52 no.4
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    • pp.383-389
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    • 2014
  • Anisakiasis, a human infection of Anisakis L3 larvae, is one of the common foodborne parasitic diseases in Korea. Studies on the identification of anisakid larvae have been performed in the country, but most of them have been focused on morphological identification of the larvae. In this study, we analyzed the molecular characteristics of 174 Anisakis type I larvae collected from 10 species of fish caught in 3 different sea areas in Korea. PCR-RFLP and sequence analyses of rDNA ITS and mtDNA cox1 revealed that the larvae showed interesting distribution patterns depending on fish species and geographical locations. Anisakis pegreffii was predominant in fish from the Yellow Sea and the South Sea. Meanwhile, both A. pegreffii and A. simplex sensu stricto (A. simplex s.str.) larvae were identified in fish from the East Sea, depending on fish species infected. These results suggested that A. pegreffii was primarily distributed in a diverse species of fish in 3 sea areas around Korea, but A. simplex s.str. was dominantly identified in Oncorhynchus spp. in the East Sea.

Mapping of grain alkali digestion trait using a Cheongcheong/Nagdong doubled haploid population in rice

  • Kim, Hak Yoon;Kim, Kyung-Min
    • Journal of Plant Biotechnology
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    • v.43 no.1
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    • pp.76-81
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    • 2016
  • We performed a molecular marker-based analysis of quantitative trait loci for traits that determine the quality of appearance of grains using 120 doubled haploid lines developed by anther culture from the F1 cross between 'Cheongcheong' (Oryza sativa L. ssp. Indica) and 'Nagdong' (Oryza sativa L. ssp. Japonica). We therefore calculated the alkali digestion value (ADV), used to indirectly measure gelatinization temperature, to evaluate the quality of cooked rice in 2013 and 2014. The ADV score of frequency distribution was higher milled rice than brown rice. In total, nine different quantitative trait loci (QTLs) were found on 5 chromosomes in 2013 and 2014. Also, chromosome 5, 8 were detected over two years. We conclude that selected molecular markers from this QTL analysis could be exploited in future rice quality. In conclusion, we investigated ADV of brown and milled rice in CNDH population. This study found nine QTLs related to the ADV of brown and milled rice. The detected one marker can be used to select lines with desirable eating-quality traits because ADV is closely associated with the eating quality of cooked rice. Therefore, it will be useful to collect resources and distinguishable in many varieties for rice breeding program.

The Separation, Purification and Utilization of Wood Main Components by Steam Explosion in Low Pressure (III) - Characterization and Utilization of Lignin - (저압(低壓) 폭쇄처리(爆碎處理)에 의한 목재주성분(木材主成分)의 분리(分離)·정제(精製) 및 이용(利用) (III) - Lignin의 화학적(化學的) 성상(性狀) 및 이용(利用) -)

  • Eom, Tae-Jin;Eom, Chan-Ho;Lee, Jong-Yoon
    • Journal of the Korean Wood Science and Technology
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    • v.24 no.3
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    • pp.45-50
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    • 1996
  • Wood chips of oak(Quercus mongolica) and larch(Larix leptolepis) were treated with low pressure steaming explosion. Main components of exploded wood were separated with hot water and methanol extraction. Crude lignin separated from those extractives were purified and those chemical characteristics were investigated. And also, lignin adhesive was prepared from crude lignin and studied those chemical characteristics. The results can be summarized as follows ; 1. The purified lignin by Bj$\ddot{o}$kman's method from crude lignin is about 30% in exploded oak wood and is about 11% in exploded larch wood as a low amount. 2. The phenolic hydroxyl groups in the purified lignins are little higher than those of MWL and molecular weight distributions of the purified lignins are some lower than that of MWL. 3. Alkaline nitrobenzene oxidation products are very low in the clude lignin but those are increased in the purified lignin 4. The gravity of lignin resins(1.15 and 1.13) are a little lower than that of phenol resin(1.16) and the compressive shearing strength of lignin resins are higher than those of phenol resin.

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