• Title/Summary/Keyword: microscopic image

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Breast Cancer Histopathological Image Classification Based on Deep Neural Network with Pre-Trained Model Architecture (사전훈련된 모델구조를 이용한 심층신경망 기반 유방암 조직병리학적 이미지 분류)

  • Mudeng, Vicky;Lee, Eonjin;Choe, Se-woon
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2022.05a
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    • pp.399-401
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    • 2022
  • A definitive diagnosis to classify the breast malignancy status may be achieved by microscopic analysis using surgical open biopsy. However, this procedure requires experts in the specializing of histopathological image analysis directing to time-consuming and high cost. To overcome these issues, deep learning is considered practically efficient to categorize breast cancer into benign and malignant from histopathological images in order to assist pathologists. This study presents a pre-trained convolutional neural network model architecture with a 100% fine-tuning scheme and Adagrad optimizer to classify the breast cancer histopathological images into benign and malignant using a 40× magnification BreaKHis dataset. The pre-trained architecture was constructed using the InceptionResNetV2 model to generate a modified InceptionResNetV2 by substituting the last layer with dense and dropout layers. The results by demonstrating training loss of 0.25%, training accuracy of 99.96%, validation loss of 3.10%, validation accuracy of 99.41%, test loss of 8.46%, and test accuracy of 98.75% indicated that the modified InceptionResNetV2 model is reliable to predict the breast malignancy type from histopathological images. Future works are necessary to focus on k-fold cross-validation, optimizer, model, hyperparameter optimization, and classification on 100×, 200×, and 400× magnification.

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Chemical Vapor Deposition of Ga2O3 Thin Films on Si Substrates

  • Kim, Doo-Hyun;Yoo, Seung-Ho;Chung, Taek-Mo;An, Ki-Seok;Yoo, Hee-Soo;Kim, Yun-Soo
    • Bulletin of the Korean Chemical Society
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    • v.23 no.2
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    • pp.225-228
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    • 2002
  • Amorphous $Ga_2O_3$ films have been grown on Si(100) substrates by metal organic chemical vapor deposition (MOCVD) using gallium isopropoxide, $Ga(O^iPr)_3$, as single precursor. Deposition was carried out in the substrate temperature range 400-800 $^{\circ}C$. X-ray photoelectron spectroscopy (XPS) analysis revealed deposition of stoichiometric $Ga_2O_3$ thin films at 500-600 $^{\circ}C$. XPS depth profiling by $Ar^+$ ion sputtering indicated that carbon contamination exists mostly in the surface region with less than 3.5% content in the film. Microscopic images of the films by scanning electron microscopy (SEM) and atomic force microscopy (AFM) showed formation of grains of approximately 20-40 nm in size on the film surfaces. The root-mean-square surface roughness from an AFM image was ${\sim}10{\AA}$. The interfacial layer of the $Ga_2O_3$/Si was measured to be ${\sim}35{\AA}$ thick by cross-sectional transmission electron microscopy (TEM). From the analysis of gaseous products of the CVD reaction by gas chromatography-mass spectrometry (GC-MS), an effort was made to explain the CVD mechanism.

Fiber Identification via the TISS and DELTA Systems (TISS system 및 DELTA system에 의한 섬유식별)

  • 전수경
    • Journal of the Korea Furniture Society
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    • v.10 no.1
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    • pp.1-12
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    • 1999
  • Of the vast number of plant taxa in the world, the wood is one of the most useful resources. It is important to identify the fibers of wood and pulp for the plant taxonomy and for the uses, but we do not have enough information on them, on them, especially for the computerizd data. The fiber identification is one of the difficult tasks. In addition to the plant taxonomy and the fiber-using industries, such identification is also important in many other fields, including education. document examiners, etc. For these purpose, the fibers should be exactly distinguished. The TISS system I have programed to identify various woods would also be useful in the identification of fibers by the genus and species in the features of unknown samples and in searching the features of a species based on its scientific name. Such searching programs are being developed in many other countries with a view to searching for the species name by using the features of the cells of the woody materials. With the survey of all the available literature, the features of the fibers of 124 species both of softwood and hardwood were examined under the electron and optical microscopies. Each species were coded and carded by the feature, and the databases were built. The microscopic were inputted into a personal computer program called and by a slide film scanner. The new computer program called TISS 2 was developed using C computer language. Korean language fonts were added to the TISS 2. The TISS 2 can be in adding and searching a image of fiber features both of a known fiber and an unknown fiber. The databases were corded for the DELTA system with was developed by Dallwitz and Paine in Australia, 1986.

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The Measurement of Oil Globule Size Distribution in the Soymilk Suspended with the Soybean Particle (대두입자가 분산된 두유에서 기름입자의 입도분포 측정)

  • Chung, J.B.;Yoon, S.K.;Sohn, H.S.
    • Korean Journal of Food Science and Technology
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    • v.22 no.4
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    • pp.369-372
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    • 1990
  • Although the measurement of oil globule size distribution is necessary to detect the process of demulsification, the reasonable methodology for its measurement has not been suggested because the solution of soymilk contains insoluble soybean particle and the protein to interfere with the detection of oil globule or oil content. The oil globule size distribution was measured by the homogeneous suspension and cumulative method under gravitational force or centrifugal force, which were modified with Stokes' low. The geometric mean diameter of oil globules in this soymilk was $033{\mu}m\;and\;031{\mu}m$ under gravitational method and centrifugal method, respectively. The differences of oil globule size distribution in the solutions emulsified by different pressures were detected by this method. The mean diameter of the solutions treated at higher pressure was shifted to smaller size and the distribution pattern of the solutions at higher pressure became more compact around the mean diameter.

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Development of Line Standards Measurement System Using an Optical Microscope (광학 현미경을 이용한 선표준물 측정 시스템 개발)

  • Kim, Jong-Ahn;Kim, Jae-Wan;Kang, Chu-Shik;Eom, Tae-Bong
    • Journal of the Korean Society for Precision Engineering
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    • v.26 no.8
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    • pp.72-78
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    • 2009
  • We developed a line standards measurement system using an optical microscope and measured two kinds of line standards. It consists of three main parts: an optical microscope module including a CCD camera, a stage system with a linear encoder, and a measurement program for a microscopic image processing. The magnification of microscope part was calibrated using one-dimensional gratings and the angular motion of stage was measured to estimate the Abbe error. The threshold level in line width measurement was determined by comparing with certified values of a line width reference specimen, and its validity was proved through the measurement of another line width specimen. The expanded uncertainty (k=2) was about 100 nm in the measurements of $1{\mu}m{\sim}10{\mu}m$ line width. In the comparison results of line spacing measurement, two kinds of values were coincide within the expanded uncertainty, which were obtained by the one-dimensional measuring machine in KRISS and the line standards measurement system. The expanded uncertainty (k=2) in the line spacing measurement was estimated as $\sqrt{(0.098{\mu}m)^2+(1.8{\times}10^{-4}{\times}L)^2}$. Therefore, it will be applied effectively to the calibration of line standards, such as line width and line spacing, with the expanded uncertainty of several hundreds nanometer.

Effect of Scirpi rhizoma Ethanol Extract on Skin Whitening in an Animal Model of Brown Guinea Pigs (기니아 피그 동물모델에서 삼릉 에탄올추출물의 미백 효과)

  • Ko, Ju-Young;Choi, Kyung-Hwa;Kim, Young-Chul
    • Environmental Analysis Health and Toxicology
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    • v.24 no.3
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    • pp.219-229
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    • 2009
  • The purpose of this study is to evaluate the skin whitening effect of Scirpi rhizama ethanol extract (SREE) in an animal model. For the experiment of the study, three brown guinea pigs weighing about 450 g to 550 g were exposed to ultraviolet-B rays on the backs at 500 $mJ/cm^2$ once a week, three consecutive weeks and the total quantity of light was 1,500 $mJ/cm^2$. The artificial tanning spots were divided into six different groups including normal (N), control (C), vehicle control (VC), positive control (PC), experimental 1 (E1, 1% SREE), experimental 2 (E2, 2% SREE) groups. Then, 30 ${\mu}L$ of SREE was transdermaly applied on the artificial tanning spots twice a day and 5 days a week for 8 weeks. With the result of a gross observation, it was found that the degree of pigmentation became apparently thinner in the group applied with E2, compared to the control or the vehicle control group. The melanin index of E2 group was significant lower than the control or the vehicle control group. In the observation with a light microscope, it was found that the degree of melanin pigmentation and S-100 protein expression considerably decreased in the groups applied with SREE, compared to the control or the vehicle control group. With the numerical analysis of melanin pigmentation and S-100 protein expression by using image-analysis software, it was found that the tendency was coincide with the results of microscopic observation.

Visualization and Quantification of Dissolution of Dense Nonaqueous Phase Liquid Entrapped in Porous Media (다공성 매체내 유기용매(DNAPL)의 용해현상 시각화 및 정량화 연구)

  • Ju, Byung-Kyu;Jeong, Seung-Woo
    • Journal of the Korea Organic Resources Recycling Association
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    • v.16 no.1
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    • pp.46-52
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    • 2008
  • Oils and chlorinated solvents leaking to the subsurface are entrapped in the soil pore and these are called as nonaqueous phase liquids (NAPL). NAPL entrapped in porous media acts as a continuous source for surface and ground water contamination. This study visualized dissolution of trichloroethylene (TCE) entrapped in porous media and quantified the velocity of TCE dissolution using an image analysis technique. As the water velocity increased, the level of dissolution increased. The results imply that a TCE contaminated region having a high infiltration rate and groundwater velocity may result in severe groundwater contamination. Microscopic images of TCE entrapped in porous media showed that TCE present in the preferential flow paths was easily dissoluted into the water phase. However, TCE present in the stagnant flow region was visualized for long time. The results imply that TCE would be still present in the soil if TCE is detected in goundwater.

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Ganglionic Cyst of the Peroneal Nerve - A Case Report - (총 비골 신경에 발생한 결절종 - 증례보고 -)

  • Song, Kwang-Son;Jeon, Si-Hyun;Kim, In-Kyu
    • The Journal of the Korean bone and joint tumor society
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    • v.9 no.2
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    • pp.212-216
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    • 2003
  • A Common peroneal nerve palsy caused by ganglionic cyst is very rare condition but well recognised entities. There have been three previous reports describing the magnetic resonance image (MRI) findings of peroneal nerve entrapment due to a ganglionic cyst. Ultrasonography, MRI, and electromyography (EMG), nerve conduction velocity (NCV), and microscopic examination were taken for diagnosis. A tubular structure near the fibular neck extending longitudinally over several slices with an inferior extension towards the superior tibiofibular joint with high T2 signal intensity was characteristic. The peroneal nerve was exposed and the ganglionic cyst was excised. The nerve was paralysed immediately after operation, but at 4 month after operation, started recovery of the function gradually and has recovered completely at 7 month. MRI is helpful to detect the extent, location, and origin of the cyst. Meticulous surgical excision can provide favorable result.

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A Study on the Micro-deformation of Plain Weave Carbon/Epoxy Composite-Polymer Foam Sandwich Structures during Curing (평직 탄소섬유 복합재료-고분자 포움 샌드위치 구조의 성형 중 미소변형에 관한 연구)

  • Kim Yong-Soo;Chang Seung-Hwan
    • Composites Research
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    • v.17 no.6
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    • pp.28-36
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    • 2004
  • Micro-tow deformation during forming of PVC foam-fabric composite sandwich structure is investigated to find out the correlation between forming condition and material deformation. The foams used in this research are PVC foams which have 4 different densities and the fabric composite is Carbon/epoxy prepreg which is plain weave (3k) as a skin material. Tow parameters such as crimp angle and tow amplitude are measured using microscope and a proper image tool and are compared with each other. In order to find out the effect of foam deformation during forming on tow deformation the compressive tests of foams are performed in three different environmental temperatures ($25^{\circ}C$, $80{\circ}C$, $125^{\circ}C$). The microscopic observation results show that the micro tow deformations are quite different from each other with respect to the foam density and forming pressure.

The Camellia sinensis Inhalation Effects of Pulmonary Structure Protection and Anti-oxidants Enzyme from Cigarette Smoking

  • Kim Sang-Gi;Jung Hyuk;Kim Bo-Ae;Choi Yoong-Suk;Kim Sang-Kook;Choi Gui-Hyang;Park Jong-Seok;Suh Tae-Soo;Kim You-Young
    • Biomedical Science Letters
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    • v.12 no.3
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    • pp.281-287
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    • 2006
  • Cigarette smoke causes atypical structure of pulmonary and oxidative damage. Therefore, we carried out to determine if exposure to cigarette smoke alters pulmonary structure and anti-oxidant related enzyme in a animal model, when natural product extracts using by Nebulizer. The rat were divided into four groups: $H_2O-treated$ (Control), natural product (Camellia sinensis) extracts-treated (CS), natural product extracts-treated with cigarette smoke-exposed (CS+SM) and cigarette smoke-expose (SM). All groups are similar to Control group in weight, but SM group is lower than the other groups. Microscopic image of the pulmonary structure in SM group showed deleterious alterations in the morphology, but the other groups are maintained in normal structure. In anti-oxidant related enzymes, SOD (superoxide dismutase) and catalase, SM group represents the lowest enzyme activity among all groups. But G6PD (glucose-6-phosphate dehydrogenase) and LPO (lipid peroxidation) is SM group represents the highest enzyme activity among all groups. These result indicate that the natural product extracts is an efficient tissue protective substance against smoke-induced lung injury.

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