• Title/Summary/Keyword: micro-CT image

Search Result 69, Processing Time 0.024 seconds

Image Calibration Techniques for Removing Cupping and Ring Artifacts in X-ray Micro-CT Images (X-ray micro-CT 이미지 내 패임 및 동심원상 화상결함 제거를 위한 이미지 보정 기법)

  • Jung, Yeon-Jong;Yun, Tae-Sup;Kim, Kwang-Yeom;Choo, Jin-Hyun
    • Journal of the Korean Geotechnical Society
    • /
    • v.27 no.11
    • /
    • pp.93-101
    • /
    • 2011
  • High quality X-ray computed microtomography (micro-CT) imaging of internal microstructures and pore space in geomaterials is often hampered by some inherent noises embedded in the images. In this paper, we introduce image calibration techniques for removing the most common noises in X-ray micro-CT, cupping (brightness difference between the periphery and central regions) and ring artifacts (consecutive concentric circles emanating from the origin). The artifacts removal sequentially applies coordinate transformation, normalization, and low-pass filtering in 2D Fourier spectrum to raw CT-images. The applicability and performance of the techniques are showcased by describing extraction of 3D pore structures from micro-CT images of porous basalt using artifacts reductions, binarization, and volume stacking. Comparisions between calibrated and raw images indicate that the artifacts removal allows us to avoid the overestimation of porosity of imaged materials, and proper calibration of the artifacts plays a crucial role in using X-ray CT for geomaterials.

A Ring Artifact Correction Method for a Flat-panel Detector Based Micro-CT System (평판 디텍터 기반 마이크로 CT시스템을 위한 Ring Artifact 보정 방법)

  • Kim, Gyu-Won;Lee, Soo-Yeol;Cho, Min-Hyoung
    • Journal of Biomedical Engineering Research
    • /
    • v.30 no.6
    • /
    • pp.476-481
    • /
    • 2009
  • The most troublesome artifacts in micro computed tomography (micro-CT) are ring artifacts. The ring artifacts are caused by non-uniform sensitivity and defective pixels of the x-ray detector. These ring artifacts seriously degrade the quality of CT images. In flat-panel detector based micro-CT systems, the ring artifacts are hardly removed by conventional correction methods of digital radiography, because very small difference of detector pixel signals may make severe ring artifacts. This paper presents a novel method to remove ring artifacts in flat-panel detector based micro-CT systems. First, the bad lines of a sinogram which are caused by defective pixels of the detector are identified, and then, they are corrected using a cubic spline interpolation technique. Finally, a ring artifacts free image is reconstructed from the corrected projections. We applied the method to various kinds of objects and found that the image qualities were much improved.

Segmentation of Natural Fine Aggregates in Micro-CT Microstructures of Recycled Aggregates Using Unet-VGG16 (Unet-VGG16 모델을 활용한 순환골재 마이크로-CT 미세구조의 천연골재 분할)

  • Sung-Wook Hong;Deokgi Mun;Se-Yun Kim;Tong-Seok Han
    • Journal of the Computational Structural Engineering Institute of Korea
    • /
    • v.37 no.2
    • /
    • pp.143-149
    • /
    • 2024
  • Segmentation of material phases through image analysis is essential for analyzing the microstructure of materials. Micro-CT images exhibit variations in grayscale values depending on the phases constituting the material. Phase segmentation is generally achieved by comparing the grayscale values in the images. In the case of waste concrete used as a recycled aggregate, it is challenging to distinguish between hydrated cement paste and natural aggregates, as these components exhibit similar grayscale values in micro-CT images. In this study, we propose a method for automatically separating the aggregates in concrete, in micro-CT images. Utilizing the Unet-VGG16 deep-learning network, we introduce a technique for segmenting the 2D aggregate images and stacking them to obtain 3D aggregate images. Image filtering is employed to separate aggregate particles from the selected 3D aggregate images. The performance of aggregate segmentation is validated through accuracy, precision, recall, and F1-score assessments.

Evaluation of Void Distribution on Lightweight Aggregate Concrete Using Micro CT Image Processing (Micro CT 이미지 분석을 통한 경량 골재 콘크리트의 공극 분포 분석)

  • Chung, Sang-Yeop;Kim, Young-Jin;Yun, Tae Sup;Jeon, Hyun-Gyu
    • KSCE Journal of Civil and Environmental Engineering Research
    • /
    • v.31 no.2A
    • /
    • pp.121-127
    • /
    • 2011
  • Spatial distribution of void space in concrete materials strongly affects mechanical and physical behaviors. Therefore, the identification of characteristic void distribution helps understand material properties and is essential to estimate the integrity of material performance. The 3D micro CT (X-ray microtomography) is implemented to examine and to quantify the void distribution of a lightweight aggregate concrete using an image analysis technique and probabilistic approach in this study. The binarization and subsequent stacking of 2D cross-sectional images virtually create 3D images of targeting void space. Then, probability distribution functions such as two-point correlation and lineal-path functions are applied for void characterization. The lightweight aggregates embedded within the concrete are individually analyzed to construct the intra-void space. Results shows that the low-order probability functions and the density distribution based on the 3D micro CT images are applicable and useful methodology to characterize spatial distribution of void space and constituents in concrete.

Evaluation of Image Quality in Micro-CT System Using Constrained Total Variation (TV) Minimization (Micro-CT 시스템에서 제한된 조건의 Total Variation (TV) Minimization을 이용한 영상화질 평가)

  • Jo, Byung-Du;Choi, Jong-Hwa;Kim, Yun-Hwan;Lee, Kyung-Ho;Kim, Dae-Hong;Kim, Hee-Joung
    • Progress in Medical Physics
    • /
    • v.23 no.4
    • /
    • pp.252-260
    • /
    • 2012
  • The reduction of radiation dose from x-ray is a main concern in computed tomography (CT) imaging due to the side-effect of the dose on human body. Recently, the various methods for dose reduction have been studied in CT and one of the method is a iterative reconstruction based on total variation (TV) minimization at few-views data. In this paper, we evaluated the image quality between total variation (TV) minimization algorithm and Feldkam-Davis-kress (FDK) algorithm in micro computed tomography (CT). To evaluate the effect of TV minimization algorithm, we produced a cylindrical phantom including contrast media, water, air inserts. We can acquire maximum 400 projection views per rotation of the x-ray tube and detector. 20, 50, 90, 180 projection data were chosen for evaluating the level of image restoration by TV minimization. The phantom and mouse image reconstructed with FDK algorithm at 400 projection data used as a reference image for comparing with TV minimization and FDK algorithm at few-views. Contrast-to-noise ratio (CNR), Universal quality index (UQI) were used as a image evaluation metric. When projection data are not insufficient, our results show that the image quality of reconstructed with TV minimization is similar to reconstructed image with FDK at 400 view. In the cylindrical phantom study, the CNR of TV image was 5.86, FDK image was 5.65 and FDK-reference was 5.98 at 90-views. The CNR of TV image 0.21 higher than FDK image CNR at 90-views. UQI of TV image was 0.99 and FDK image was 0.81 at 90-views. where, the number of projection is 90, the UQI of TV image 0.18 higher than FDK image at 90-views. In the mouse study UQI of TV image was 0.91, FDK was 0.83 at 90-views. the UQI of TV image 0.08 higher than FDK image at 90-views. In cylindrical phantom image and mouse image study, TV minimization algorithm shows the best performance in artifact reduction and preserving edges at few view data. Therefore, TV minimization can potentially be expected to reduce patient dose in clinics.

Development of a Micro-CT System for Small Animal Imaging (소 동물 촬영을 위한 Micro-CT의 개발)

  • Sang Chul Lee;Ho Kyung Kim;In Kon Chun;Myung Hye Cho;Min Hyoung Cho;Soo Yeol Lee
    • Journal of Biomedical Engineering Research
    • /
    • v.25 no.2
    • /
    • pp.97-102
    • /
    • 2004
  • We developed an x-ray cone-beam micro computed tomography (micro-CT) system for small-animal imaging. The micro-CT system consists of a 2-D flat-panel x-ray detector with a field-of-view (FOV) of 120${\times}$120 mm2, a micro-focus x-ray source, a scan controller and a parallel image reconstruction system. Imaging performances of the micro-CT system have been evaluated in terms of contrast and spatial resolution. The minimum resolvable contrast has been found to be less than 36 CT numbers at the dose of 95 mGy and the spatial resolution about 14 lp/mm. As small animal imaging results, we present high resolution 3-D images of rat organs including a femur, a heart and vessels. We expected that the developed micro-CT system can be greatly used in biomedical studies using small animals.

Microvascular Contrast Image in Portal Veins of Rat using Micro-CT (마이크로 CT를 이용한 BALB/C(흰쥐) 간문맥의 미세혈관 조영 영상)

  • Lee, Sang-Ho;Lim, Cheong-Hwan;Jung, Hong-Rayng;Han, Beom-Hee;Mo, Eun-Hee;Chai, Kyu-Yun
    • The Journal of the Korea Contents Association
    • /
    • v.10 no.9
    • /
    • pp.259-266
    • /
    • 2010
  • The study focuses on the value of Micro CT, a high resolution X-ray imaging device, by using it on rats to observe the overall portal vein image of the liver and the microvasculature of each lobes, visualize the 4 segmental lobes and acquire 3D image of the microvasculature through the reconstruction of sectional image data. Less of the damage to liver of the 5 mice, the device was able to separate the liver into 4 segmental lobes and displayed the 4 portal vein microvasculature in 2D. By using the 3D MIP technique, observation of the whole portal vein system microvasculature in 3D image was made possible along with each of the portal vein segment's branches until the 6th branch. Measured the size of 6branch, the average was measured at 1branch : $0.51mm{\pm}0.08$, 2 branch : $0.32mm{\pm}0.12$, 3 branch : $0.23mm{\pm}0.11$, 4 branch : $0.19mm{\pm}0.08$, 5 branch : $0.13mm{\pm}0.06$, 6 branch : $70.5{\mu}m{\pm}14.1$. The 3D image and the images of the microvasculatures in the result of study proved that the Micro-CT can be considered many useful device in obtaining high resolution images.

Metal artifact SUV estimation by using attenuation correction image and non attenuation correction image in PET-CT (PET-CT에서 감쇠보정 영상과 비감쇠보정 영상을 통한 Metal Artifact 보정에 대한 고찰)

  • Kim, June;Kim, Jae-II;Lee, Hong-Jae;Kim, Jin-Eui
    • The Korean Journal of Nuclear Medicine Technology
    • /
    • v.20 no.2
    • /
    • pp.21-26
    • /
    • 2016
  • Purpose Because of many advantages, PET-CT Scanners generally use CT Data for attenuation correction. By using CT based attenuation correction, we can get anatomical information, reduce scan time and make more accurate correction of attenuation. However in case metal artifact occurred during CT scan, CT-based attenuation correction can induce artifacts and quantitative errors that can affect the PET images. Therefore this study infers true SUV of metal artifact region from attenuation corrected image count -to- non attenuation corrected image count ratio. Materials and Methods Micro phantom inserted $^{18}F-FDG$ 4mCi was used for phantom test and Biograph mCT S(40) is used for medical test equipment. We generated metal artifact in micro phantom by using metal. Then we acquired both metal artifact region of correction factor and non metal artifact region of correction factor by using attenuation correction image count -to- non attenuation correction image count ratio. In case of clinical image, we reconstructed both attenuation corrected images and non attenuation corrected images of 10 normal patient($66{\pm}15age$) who examined PET-CT scan in SNUH. After that, we standardize several organs of correction factor by using attenuation corrected image count -to- non attenuation corrected count ratio. Then we figured out metal artifact region of correction factor by using metal artifact region of attenuation corrected image count -to- non attenuation corrected count ratio And we compared standard organs correction factor with metal artifact region correction factor. Results according to phantom test results, metal artifact induce overestimation of correction factor so metal artifact region of correction factors are 12% bigger than the non metal artifact region of correction factors. in case of clinical test, correction factor of organs with high CT number(>1000) is $8{\pm}0.5%$, correction factor of organs with CT number similar to soft tissue is $6{\pm}2%$ and correction factor of organs with low CT number(-100>) is $3{\pm}1%$. Also metal artifact correction factors are 20% bigger than soft tissue correction factors which didn't happened metal artifact. Conclusion metal artifact lead to overestimation of attenuation coefficient. because of that, SUV of metal artifact region is overestimated. Thus for more accurate quantitative evaluation, using attenuation correction image count -to-non attenuation correction image count ratio is one of the methods to reduce metal artifact affect.

  • PDF

Quantitative Evaluation of Sparse-view CT Images Obtained with Iterative Image Reconstruction Methods (반복적 연산으로 얻은 Sparse-view CT 영상에 대한 정량적 평가)

  • Kim, H.S.;Gao, Jie;Cho, M.H.;Lee, S.Y.
    • Journal of Biomedical Engineering Research
    • /
    • v.32 no.3
    • /
    • pp.257-263
    • /
    • 2011
  • Sparse-view CT imaging is considered to be a solution to reduce x-ray dose of CT. Sparse-view CT imaging may have severe streak artifacts that could compromise the image qualities. We have compared quality of sparseview images reconstructed with two representative iterative reconstruction techniques, SIRT and TV-minimization, in terms of image error and edge preservation. In the comparison study, we have used the Shepp-Logan phantom image and real CT images obtained with a micro-CT. In both phantom image and real CT image tests, TV-minimization technique shows the best performance in error reduction and preserving edges. However, the excessive computation time of TV-minimization is a technical challenge for the practical use.