• Korean Journal of Environmental Agriculture
• /
• v.19 no.4
• /
• pp.314-318
• /
• 2000

To compare heavy metal phytoavailability in paddy soils near five abandoned mining areas, 4 different soil extractants such as 0.1M-HCl, $0.1M-HNO_3$, 0.05M-EDTA, and 0.005M-DTPA were used. Total acid digestion method $(H_2SO_4:HClO_4:HNO_3)$ was also employed to analyze heavy metal content in 30 paddy soils and brown rice. The rates of extracted heavy metal to total content were in the range of $12.1{\sim}39.1%$ for Cd, $20.5{\sim}45.5%$ for Cu, $10.6{\sim}30.7%$ for Pb, and $6.7{\sim}13.0%$ for Zn. 0.1M-HCl and $0.1M-HNO_3$ extractable both Cu and Pb were relatively less extracted at the high soil pH and extractable calcium site(Mine D) whereas 0.05M-EDTA and 0.005M-DTPA extractable Pb were strongly extracted at the same soils. In case of Cd, Cu, and Zn in soil, 4 types of extractable heavy metals and total content were highly correlated with each other. However, there were positive correlations between 0.1 M-HCl and $0.1M-HNO_3$ extractable Pb as well as between 0.05M-EDTA and 0.005M-DTPA extractable Pb, which were relatively similar extractants in chemical properties. The rates of heavy metals in brown rice to total contents in soils were in the order Zn>Cd>Cu>Pb. Specially, the rate of Cd, Pb, and Zn were lower at the highest level of soil pH and Ex. Ca. Both Cd and Zn in brown rice were positively correlated with those of all soil extractants. It was estimated that the solubility following to the plant uptake of Cd and Zn were higher than those of Cu and Pb considering relationships between all kinds of heavy metal contents in soil and those in brown rice.

• 한국균학회소식:학술대회논문집
• /
• 2015.05a
• /
• pp.13-13
• /
• 2015

Rice blast fungus, Magnaporthe oryzae, is the most destructive pathogen of rice in the world. This fungus has a biotrophic phase early in infection and switches to a necrotrophic lifestyle after host cell death. During the biotrophic phase, the fungus competes with host for nutrients and oxygen. Continuous uptake of oxygen is essential for successful establishment of blast disease of this pathogen. Here, we report transcriptional responses of the fungus to oxygen limitation. Transcriptome analysis using RNA-Seq identified 1,047 up-regulated genes in response to hypoxia. Those genes were involved in mycelial development, sterol biosynthesis, and metal ion transport based on hierarchical GO terms and well-conserved among three different fungal species. In addition, null mutants of three hypoxia-responsive genes were generated and tested for their roles on fungal development and pathogenicity. The mutants for a sterol regulatory element-binding protein gene, MoSRE1, and C4 methyl sterol oxidase gene, ERG25, exhibited increased sensitivity to hypoxia-mimetic agent, increased conidiation, and delayed invasive growth within host cells, suggesting important roles in fungal development. However, such defects did not cause any significant decrease in disease severity. The other null mutant for alcohol dehydrogenase gene, MoADH1, showed no defect in the hypoxia-mimic condition and fungal development. Taken together, this comprehensive transcriptional profiling in response to a hypoxia condition with experimental validations would provide new insights on fungal development and pathogenicity in plant pathogenic fungi.

• Mycobiology
• /
• v.45 no.1
• /
• pp.25-30
• /
• 2017

Metal-based drugs, such as 1,10-phenanthroline, have demonstrated anticancer, antifungal and antiplasmodium activities. One of the 1,10-phenanthroline derivatives compounds (1)-N-2-methoxybenzyl-1,10-phenanthrolinium bromide (FEN), which has been demonstrated an inhibitory effect on the growth of Candida spp. This study aimed to explore the in vitro antifungal activity of FEN and its effect on the membrane integrity of Candida albicans. The minimum inhibitory concentration (MIC) and the minimum fungicidal concentration (MFC) of FEN against planktonic C. albicans cells were determined using the broth microdilution method according to the Clinical and Laboratory Standards Institute guidelines. Cell membrane integrity was determined with the propidium iodide assay using a flow cytometer and were visualized using scanning electron microscopy (SEM). Planktonic cells growth of C. albicans were inhibited by FEN, with an MIC of $0.39-1.56{\mu}g/mL$ and a MFC that ranged from 3.125 to $100{\mu}g/mL$. When C. albicans was exposed to FEN, the uptake of propidium iodide was increased, which indicated that membrane disruption is the probable mode of action of this compound. There was cells surface changes of C. albicans when observed under SEM.

• Journal of the Korean Chemical Society
• /
• v.42 no.1
• /
• pp.28-35
• /
• 1998

Microorganisms such as alga are able to uptake toxic and heavy metal ions. After Cd(Ⅱ) was preconcentrated on the carbon paste electrode constructed by incorporating alga (Anabaena), it was determined with differential pulse anodic stripping voltammetry. A well-defined oxidation peak of Cd(Ⅱ) was obtained at - 0.75 V vs. SCE. We investigated the optimum conditions using the peak, which are the effect of the amount of alga, pH, ionic strength, temperature, and preconcentration time on the preconcentration of Cd(Ⅱ) and that of the reduction time and potential on the reduction of Cd(Ⅱ) preconcentrated. Calibration curve for the determination of Cd(Ⅱ) was linear over the range of $1.0{\times}10^6\;M\;to\;8.0{\times}10^6$\;M (R=0.9978) and the detection limit was $5.0{\times}10^{-7}$\;M. The relative standard deviation was 3.1% (n=6) for $7.0{\times}10^{-6}\;M Cd(Ⅱ). In regeneration of the electrode surface with 0.1 M HCl, the response was reproducible continuously by 10 times.

• Journal of Microbiology and Biotechnology
• /
• v.11 no.1
• /
• pp.153-159
• /
• 2001

In order to clone the peptide synthetase gene form Lysobacter lactamgenus IFO 14,288, the gene fragments were amplified using primers for the adenylation domain and the thionylation domain of the peptide synthetase genes in other organisms by polymerase chain reaction (PCR). The resulting 0.5-kb fragment was cloned in a pGEM-T vector, and the nucleotide sequences were determined. Six different PCR products were obtained; three were identified to be a part of L-$\alpha$-aminoadipyl-L-cysteinyl-D-valine (ACV) synthetase and three to be other peptide synthetases. Using each of the two different classes of PCR products as mixed probes, a cosmid library of L. lactamgenus chromosomal DNA constructed in a pHC79 vector was screened by an in situ hybridization procedure, and one positive clone was selected which was bound by peptide synthetase gene fragments as well as ACV synthetase gene fragments. The partial sequence analysis formt he obtained pPTS-5 cosmid showed th presence of more than two open reading frames. These were for two putative membrane transporters, which were homologous with several integral membrane proteins including the ABC transporter ATP-binding protein of E. coli (YbjZ) and the metal ion uptake protein of Bacillus subtilis (YvrN). A 45% homology was also found between the two transporter proteins at the carboxy terminus. Through a hydropathy analysis and transmembrane analysis. 4-5 transmembrane domains were found in these two proteins. When the genes were expressed in Escherichia coli, the gene products inhibited the hose cell growth, probably due to the disturbance of the membrane transport system.

• Korean Journal of Environmental Agriculture
• /
• v.18 no.1
• /
• pp.24-27
• /
• 1999

When red pepper was cultivated in the polluted soil with heavy metals, the content of these heavy metals affected. The contents of heavy metals at a site near Zinc mine dump in the Youngyang area were very high compared with those in a normal area and it was highest in 2.0km site. followed 2.5km > 3.0km apart from Zinc mine dump. The growth of red pepper was remarkably poor and the contents of heavy metals in polluted soil were higher than in unpolluted soil. The relationship between the content of Zn, Cu, Pb, Cd, As and the growth of red pepper was negatively correlated, respectively. A higher correlation seemed to exist among the content of Zn.Cu, Cd, As in soil, of Zn, Cd, and As in red pepper. The result indicated that heavy metals were absorbed and accumulated by plants grown in the polluted area.

• The Korean Journal of Ecology
• /
• v.15 no.4
• /
• pp.433-449
• /
• 1992

Three horticultural herbaceous plants and a natural herbaceous plant were tested to determine the growth responses, biomass and uptake of cadmium(cd), lead(pb) by application of cd and pb soil treatment in pot culture. The ecological effects on the growth of the plants were investigated to determine the tolerance for the heavy metal pollutants cd and pb. the marginal concentrain of cd treatment on the growth of the each plant was below the 1, 000 ppm treatment of cd. The marginal concentration of pb treatment was below the 1, 000ppm treatment of pb in cultivation of salvia splendens ker., celosia cristata l. and below the 3, 000ppm treatment of pb in cultivation of portulaca grandiflora hook., sedum saramentosum bunge. the resistance for cd of sedum saramentosum bunge, celosia criastata l., portulaca grandiflora hook. and salvia splendens ker. was in the listed order. The resistence for pb was in order of sedum saramentosum bunge, portulaca grandiflora hook. Salvia splendens ker.and celosia criastata l.stems. The flowering of portulaca grandiflora hook. was sustained in the pb 1, 000ppm treated group only. The higher the concentration of pb in the soil cultivated the plants was, the less the content of leaf chlorophy11 in each plant was. The number of stomata per unit leaf area was the highest in salvia splendens ker. and in order of celosia l., sedum saramentosum bunge., portulaca grandiflora hook., the higher the cd and pb concentration of cd and pb treatment was, the more the concent of cd and pb in the part of each plant increased. the content of cd and pb in the stems of salvia spiendens ker. was the highest in the 1, 000ppm-treated ground and in order of the roots, the leaves and the flowers.

• Journal of the Korea Organic Resources Recycling Association
• /
• v.15 no.2
• /
• pp.81-88
• /
• 2007

A study on the removal of heavy metals using sawdust was performed. Among heavy metals such as lead, copper and cadmium ions, uptake capacity of lead ions was the highest as about 0.22 mmol/g-dry mass at pH 4. The surface condition and existence of lead ions onto the sawdust was confirmed by the FT-IR, SEM (Scanning Electron Microscopy), and EDX (Energy Dispersive X-ray) instrumental analyses. When 0.5g of sawdust was added to initial lead solution (100ppm) removal efficiency was approximately 90%. Isothermal adsorption curve for lead ions was described by the Langmuir model equation and experimental data well fitted to model equation. Most adsorption for lead ions was also completed within 60min and pH of lead solution from 5.8 to 4.5 decreased with time.

• Korean Journal of Environmental Biology
• /
• v.37 no.3
• /
• pp.335-342
• /
• 2019

The purpose of this study was to investigate the toxic effects of zinc in collembolan Paronychiurus kimi at the individual (survival and juvenile production) and population (population growth and age structure) levels after 28 days of exposure in artificially spiked soil. These toxic effects were interpreted in conjunction with the internal zinc concentrations in P. kimi. The EC₅₀ value for juvenile production based on the total zinc concentration was 457 mg Zn kg^-1 dry soil, while the LC₅₀ value for adult survival and r_i=0 value for population growth were within the same order of magnitude (2,623 and 1,637 mg Zn kg^-1 dry soil, respectively). Significant differences in adult survival, juvenile production, and population growth compared with the control group were found at concentrations of 1,500, 375, and 375 mg Zn kg^-1 dry or higher, respectively, whereas significant differences in the age structure, determined by the proportion of each age group in the population, were observed in all treatment groups. It appeared that the internal zinc level in P. kimi was regulated to some extent at soil zinc concentrations of ≤375 mg Zn kg^-1 dry soil, but not at high soil zinc concentrations. These results indicate that, despite zinc being regulated by P. kimi, excess zinc exceeding the regulatory capacity of P. kimi can trigger changes in the responses at the individual and population levels. Given that population dynamics are affected not only by individual level but also by population level endpoints, it is concluded that the toxic effects of pollutants should be assessed at various levels.

• Journal of Microbiology and Biotechnology
• /
• v.18 no.8
• /
• pp.1357-1363
• /
• 2008

The $P_{entC}$ promoter of the entCERA operon encoding enzymes for enterobactin biosynthesis in Escherichia coli is tightly regulated by the availability of iron in the culture medium. In iron-rich conditions, the $P_{entC}$ promoter activity is strongly repressed by the global transcription regulator Fur (ferric uptake regulator), which complexes with ferrous ions and binds to the Fur box 19-bp inverted repeat. In this study, we have constructed the expression vector pOS2 containing the $P_{entC}$ promoter and characterized its repression, induction, and modulation by quantifying the expression of the lacZ reporter gene encoding $\beta$-galactosidase. $\beta$-Galactosidase activities of E. coli transformants harboring pOS2-lacZ were highly induced in the presence of divalent metal ion chelators such as 2,2'-dipyridyl and EDTA, and were strongly repressed in the presence of excess iron. It was also shown that the basal level $\beta$-galactosidase expression by the $P_{entC}$ promoter was drastically decreased by incorporating the fur gene into the expression vector. Since the newly developed iron chelator-inducible expression system is efficient and cost-effective, it has wide applications in recombinant protein production.