• Journal of Microbiology and Biotechnology
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• 제19권10호
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• pp.1184-1190
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• 2009

A thermostable extracellular $\beta$-mannanase from the culture supernatant of a fungus Aspergillus niger gr was purified to homogeneity. SDS-PAGE of the purified enzyme showed a single protein band of molecular mass 66 kDa. The $\beta$-mannanase exhibited optimum catalytic activity at pH 5.5 and $55^{\circ}C$. It was thermostable at $55^{\circ}C$, and retained 50% activity after 6 h at $55^{\circ}C$. The enzyme was stable at a pH range of 3.0 to 7.0. The metal ions $Hg^{2+}$, $Cu^{2+}$, and $Ag^{2+}$ inhibited complete enzyme activity. The inhibitors tested, EDTA, PMSF, and 1,10-phenanthroline, did not inhibit the enzyme activity. N-Bromosuccinimide completely inhibited enzyme activity. The relative substrate specificity of enzyme towards the various mannans is in the order of locust bean gum>guar gum>copra mannan, with $K_m$ of 0.11, 0.28, and 0.33 mg/ml, respectively. Since the enzyme is active over a wide range of pH and temperature, it could find potential use in the food-processing industry.

• Journal of Microbiology and Biotechnology
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• 제8권3호
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• pp.270-276
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• 1998

Extracellular ${\alpha}$-glucosidase was purified to homogeneity from moderately thermophilic Bacillus sp. DG0303. The thermostable ${\alpha}$-glucosidase was purified by ammonium sulfate fractionation, ion-exchange chromatography, preparative polyacrylamide gel electrophoresis (PAGE), and electroelution. The molecular weight of the enzyme was estimated to be 60 kDa by SDS-PAGE. The optimum temperature for the action of the enzyme was at $60^{\circ}C$. It had a half-life of 35 min at $60^{\circ}C$. The enzyme was stable at the pH range of 4.5~7.0 and had an optimum pH at 5.0. The enzyme preparation did not require any metal ion for activity. The thermostable ${\alpha}$-glucosidase hydrolyzed the ${\alpha}$-1,6-linkages in isomaltose, isomaltotriose, and panose, and had little or no activity with maltooligosaccharides and other polysaccharides. The $K_m$ (mM) for p-nitrophenyl-${\alpha}$-D-glucopyranoside (pNPG), panose, isomaltose, and isomaltotriose were 4.6, 4.7, 40.8, and 3.7 and the $V_{max}$(${\mu}mol{\cdot}min^-1$$mg^-1$) for those substrates were 5629, 1669, 3410, and 1827, respectively. The N-terminal amino acid sequence of the enzyme was MERVWWKKAV. Based on its substrate specificity and catalytic properties, the enzyme has been assigned to be an oligo-1,6-glucosidase.

• Food Science and Biotechnology
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• 제14권1호
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• pp.117-122
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• 2005

Polyphenoloxidase (PPO) was extracted from Solanum tuberosum Jasim by various chromatographic methods and was subsequently purified and characterized. PPO was purified upto 78-fold from the crude extract. SDS-PAGE profile of the enzyme showed a major subunit of PPO with molecular weight of 40 kDa. The optimum pH and temperature for the maximum activity of PPO was 6.5 and $25^{\circ}C$, respectively. The enzyme was found to be quite stable between 10 and $40^{\circ}C$, whereas it was almost inactivated at $70^{\circ}C$ when incubated for 30 min. Substrate specificity study indicated that catechol was the most suitable substrate for PPO isolated from purple-fleshed potato with a $K_m$ value of 21.1 mM. The most effective inhibitor was ascorbic acid, followed by L-cysteine, citric acid, EDTA, and boric acid. Studies on the effect of metal ion on PPO activity showed that magnesium and copper were inhibitory, while iron and zinc ions increased the activity of PPO.

• 대한화학회지
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• 제32권1호
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• pp.53-59
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• 1988

파라치환된 포타슘 페녹사이드류와 18-crown-6가 이루는 1 : 1 착물 형성상수를 전기 전도도법으로 35${\circ}C$에서 측정하여 용매와 치환기의 변화에 따른 효과를 측정하였다. 18-crown-6와 $K^+$의 착물 형성상수는 $CH_3$OH(DN=19.0) > DMF(26.6) > DMSO(29.8)의 순으로 감소되었다. 이는 전자주게 수가 클수록 $K^+$과 용매와의 상호작용이 커지므로 크라운 에테르와의 착물형성과의 서로 경쟁관계가 되어 $K_f$값이 작아진다고 추정된다. 포타슘 페녹사이드의 치환기가 p-N$O_2$ > H > p-$CH_3$ > p-O$CH_3$의 순으로 $K_f$값이 감소하는 경향을 나타내었다. 이는 전자를 당기는 기는 페녹사이드 음이온이 비편재화되어 안정해지므로 전자를 미는 기에 비해서 $K^+$를 쉽게 내어 놓을 수 있어 18-crown-6와의 착물 형성이 용이하기 때문이라고 생각된다.

• 한국환경농학회지
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• 제28권2호
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• pp.158-164
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• 2009

왕겨와 톱밥 3종(미송, 참나무, 포플러)을 sodium hydroxide(NaOH)와 tartaric acid($C_4H_6O_6$)를 처리한 후 중금속 흡착특성을 평가한 결과 모든 소재에서 중금속 선택성은 Pb > Cu > Cd > Zn 순으로 나타났다. 참나무 톱밥(NaOH로 개질)은 Pb(19.36 mg $g^{-1}$)과 Cu(13.47 mg $g^{-1}$)에 대해 그리고 왕겨(tartaric acid로 개질)는 Cd(5.37 mg $g^{-1}$)과 Zn(2.24 mg $g^{-1}$)에 대해 뛰어난 흡착능을 나타내었다. SEM 분석결과 4가지 소재에서 모두 NaOH 개질 후에 표면의 불순물이 제거됨이 확인되었고 흡착표면이 매끄럽게 안정화 된 것을 관찰할 수 있었다. FT-IR 분석결과 왕겨는 1080 $cm^{-1}$에서 carbonyl group, hydroxyl group 등의 관능기가 존재함을 확인하였고 tartaric acid로 개질한 경우 1184 $cm^{-1}$와 1735 $cm^{-1}$에서 carboxylate group, carboxyl group, methylene group 등의 새로운 관능기가 생성됨을 확인하였다. 3종의 톱밥(미송, 참나무, 포플러)에 대한 FT-IR 분석결과 왕겨와 유사한 peak가 관찰되었는데 1030 $cm^{-1}$에서 carbonyl group과 hydroxyl group, 1200 $cm^{-1}$과 1700 $cm^{-1}$ 사이에서 carboxylate group, carboxyl group, methylene group 등이 이에 해당하였다. 한편 NaOH로 개질한 경우 peak에서 큰 변화를 나타내지 않았으나 흡착량이 증가한 것은 표면개질로 새로운 관능기가 생성되지는 않았으나 표면의 불순물이 제거.안정화됨으로써 흡착 표면적이 증가되었기 때문인 것으로 판단되었다.

• BMB Reports
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• 제40권4호
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• pp.588-594
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• 2007

A novel hot spring thermophile, Anoxybacillus gonensis A4 (A. gonensis A4) was investigated in terms of capability of tributyrin degradation and characterization of its thermostable esterase activity by the hydrolysis of p-nitrophenyl butyrate (PNPB). It was observed that A. gonensis A4 has an esterase with a molecular weight of 62 kDa. The extracellular crude preparation was characterized in terms of substrate specificity, pH and temperature optima and stability, kinetic parameters and inhibition/activation behaviour towards some chemicals and metal ions. Tributyrin agar assay showed that A. gonensis A4 secreted an esterase and $V_{max}$ and $K_m$ values of its activity were found to be 800 U/L and 176.5 ${\mu}M$, respectively in the presence of PNPB substrate. The optimum temperature and pH, for A. gonensis A4 esterase was $60-80^{\circ}C$ and 5.5, respectively. Although the enzyme activity was not significantly changed by incubating crude extract solution at $30-70^{\circ}C$ for 1 h, the enzyme activity was fully lost at $80^{\circ}C$ for same incubation period. The pH-stability profile showed that original crude esterase activity increased nearly 2-fold at pH 6.0. The effect of some chemicals on crude esterase activity indicated that A. gonensis A4 produce an esterase having serine residue in active site and -SH groups were essential for its activity.

• 미생물학회지
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• 제47권2호
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• pp.158-162
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• 2011

Proteus mirabilis 전사 조절($\underline{P}$roteus $\underline{m}$irabilis $\underline{t}$ranscription $\underline{r}$egulator ) 단백질의 중금속 결합 부위에 대한 아미노산 서열분석에서 PMTR 단백질은 ZntR (아연 저항성) 단백질이 아닌 CueR (구리 저항성) 단백질과 동일한 환경이다. 그리고 겔시프트 법(gel shift assay) 실험에 의하면 PMTR 단백질은 Escherichia coli의 zntA (zinc-translocating P-type ATPase gene) 프로모터에 결합하지 않고 copA (copper-translocating P-type ATPase gene) 프로모터와 Proteus mirabilis에서 atpase (copper-translocating P-type ATPase gene) 프로모터에 결합하였다. DNase I protection 실험에서 PMTR 단백질 결합부위와 DNase I 민감성 염기들이 관찰되었다. P. mirabilis atpase 프로모터에서 민감성 염기로 주형가닥(template strand)에서 C와 A 그리고 비주형가닥(non-template strand)에서 G와 C 염기들이다. 이런 민감성 염기들은 다른 MerR 패밀리 단백질에서 또한 관찰되었으며, 이것은 단백질에 의한 DNA bending을 의미한다.

• Applied Biological Chemistry
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• 제36권6호
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• pp.539-546
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• 1993

본 연구에서는 Cheddar 치즈의 숙성기간을 단축시키고 flavor를 증진시키기 위하여 Micrococcus sp. LL3를 치즈 제조시에 첨가할 목적으로 본 균주가 생성하는 aminopeptidase의 특성을 조사하였으며, 또한 본 효소를 정제하였다. L-Leucine-p-nitroanilide를 기질로 사용 하였을 때 본 효소의 최적온도와 pH는 각각 $30^{\circ}C$ 및 7.0이었다. 본 효소는 $50^{\circ}C$까지의 온도에서 10분간 방치하였을 경우에도 안정하였다. $Mg^{++}$ ion에 의해 본 효소의 활성이 촉진되었으나 $Hg^{++}$ ion과 EDTA나 1,10-phenanthroline에 의해서 효소활성이 거의 실활되어 metallopeptidase인 것으로 추정되었다. 본 효소의 기실 특이성은 광범위 하였으나, N-terminal amino acid로서 arginine을 함유한 peptide는 분해하지 못했다. 본 균주가 생성하는 aminopeptidase의 정제를 위하여 DEAE-Sephacel ion chromatography및 gel filtration을 실시하였으며, 이때 분자량 46,500의 효소를 얻을 수 있었다.

• Journal of Microbiology and Biotechnology
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• 제21권5호
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• pp.483-493
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• 2011

An acid phosphatase (HppA) activated by $NH_4Cl$ was purified 192- and 34-fold from the periplasmic and membrane fractions of Helicobacter pylori, respectively. SDS-polyacrylamide gel electrophoresis revealed that HppA from the latter appears to be several kilodaltons larger in molecular mass than from the former by about 24 kDa. Under acidic conditions (pH${\leq}$4.5), the enzyme activity was entirely dependent on the presence of certain mono- and/or divalent metal cations (e.g., $K^+$,$ NH_4{^+}$, and/or $Ni^{2+}$). In particular, $Ni^{2+}$ appeared to lower the enzyme's $K_m$ for the substrates, without changing $V_{max}$. The purified enzyme showed differential specificity against nucleotide substrates with pH; for example, the enzyme hydrolyzed adenosine nucleotides more rapidly at pH 5.5 than at pH 6.0, and vice versa for CTP or TTP. Analyses of the enzyme's N-terminal sequence and of an $HppA^-$ H. pylori mutant revealed that the purified enzyme is identical to rHppA, a cloned H. pylori class C acid phosphatase, and shown to be the sole bacterial 5'-nucleotidase uniquely activated by $NH_4Cl$. In contrast to wild type, $HppA^-$ H. pylori cells grew more slowly. Strikingly, they imported $Mg^{2+}$ at a markedly lowered rate, but assimilated urea rapidly, with a subsequent increase in extracellular pH. Moreover, mutant cells were much more sensitive to extracellular potassium ions, as well as to metronidazole, omeprazole, or thiophenol, with considerably lowered MIC values, than wild-type cells. From these data, we suggest that the role of the acid phosphatase HppA in H. pylori may extend beyond 5'-nucleotidase function to include cation-flux as well as pH regulation on the cell envelope.

• BMB Reports
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• 제38권5호
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• pp.584-590
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• 2005

Glucose 6-phosphate dehydrogenase (EC 1.1.1.49) was purified from Aspergillus aculeatus, a filamentous fungus previously isolated from infected tongue of a patient. The enzyme, apparently homogeneous, had a specific activity of $220\;units\;mg^{-1}$/, a molecular weight of $105,000{\pm}5,000$ Dal by gel filtration and subunit size of $52,000{\pm}1,100$ Dal by sodium dodecyl sulphate-polyacrylamide gel electrophoresis. The substrate specificity was extremely strict, with glucose 6-phosphate (G6P) being oxidized by nicotinamide adenine dinucleotide phosphate (NADP) only. At assay pH of 7.5, the enzyme had $K_m$ values of $6\;{\mu}m$ and $75\;{\mu}m$ for NADP and G6P respectively. The $k_{cat}$ was $83\;s^{-1}$. Steady-state kinetics at pH 7.5 produced converging linear Lineweaver-Burk plots as expected for ternary-complex mechanism. The patterns of product and dead-end inhibition suggested that the enzyme can bind NADP and G6P separately to form a binary complex, indicating a random-order mechanism. The enzyme was irreversibly inactivated by heat in a linear fashion, with G6P providing a degree of protection. Phosphoenolpyruvate (PEP), adenosinetriphosphate (ATP), and fructose 6-phosphate (F6P), in decreasing order, are effective inhibitors. Zinc and Cobalt ions were effective inhibitors although cobalt ion was more potent; the two divalent metals were competitive inhibitors with respect to G6P, with $K_i$ values of $6.6\;{\mu}m$ and $4.7\;{\mu}m$ respectively. It is proposed that inhibition by divalent metal ions, at low NADPH /NADP ratio, is another means of controlling pentosephosphate pathway.