• 제목/요약/키워드: marine organism

검색결과 275건 처리시간 0.031초

Isolation and Characterization of Chondroitin Sulfates from the Byproducts of Marine Organisms

  • Im, A-Rang;Sim, Joon-Soo;Park, You-Mie;Hahn, Bum-Soo;Toida, Toshihiko;Kim, Yeong-Shik
    • Food Science and Biotechnology
    • /
    • 제18권4호
    • /
    • pp.872-877
    • /
    • 2009
  • By-products of marine organisms including salmon, skate, flatfish, and yellow goosefish were investigated to search for new source of chondroitin sulfate (CS). Agarose gel electrophoresis with chondroitinase depolymerization showed that purified chondroitin sulfate did not contain any other glycosaminoglycans. 1H-nuclear magnetic resonance (NMR) spectra were acquired to confirm the structure and purity. The average molecular weight ranging from 22 to 64 kDa was determined by high performance size exclusion chromatography. Disaccharide compositions and purities were determined by strong anion exchange-high performance liquid chromatography (SAX-HPLC) after chondroitinase ABC depolymerization. SAX-HPLC data exhibited that the purity was from $81.7{\pm}1.3$ to $114.2{\pm}2.5%$ and the yield was from 1.3 to 12.5%. All analytical results indicate that salmon cartilage, skate cartilage, and yellow goosefish bone could be promising sources of CS to substitute shark cartilage CS in commercial neutraceuticals.

Screening of Differentially Expressed Genes in Diesel Oil-exposed Marine Fish Using DD-PCR

  • Woo, Seon-Ock;Yum, Seung-Shic;Yim, Un-Hyuk;Lee, Yaek-Kyun
    • Molecular & Cellular Toxicology
    • /
    • 제2권4호
    • /
    • pp.251-256
    • /
    • 2006
  • The exploration of genes which expressions are changed by exposure to ecotoxicants or pollutants can provide the important information about the reaction mechanisms in the body as well as adaptation to exterior stimulus or environmental changes. Also they can be developed as biomarkers for the detection of environmental pollution. Differential display polymerase chain reaction (DD-PCR) technique has been usefully used to hunt the clones which expressions are up-regulated or down-regulated by exterior changes and this study aimed to search for those clones in diesel oil-exposed rockfish (Sebastes schlegeli) using DD-PCR. The RNA isolated from liver of 20 ppb diesel oil-exposed rockfish was used for screening of the differentially displayed genes and total 44 differentially expressed genes (DEG) are detected then their nucleotide sequences were analyzed. The present data provided the general information about the effect of diesel oil contamination on marine organism and further more the primary step in development of new biomarkers for marine environmental pollution or ecotoxicological stresses.

Diurnal Modification of a Red-Tide Causing Organism, Chattonella antiqua (Raphidophyceae) from Korea

  • Kim, So-Young;Seo, Kyung-Suk;Lee, Chang-Gyu;Lee, Yoon
    • ALGAE
    • /
    • 제22권2호
    • /
    • pp.95-106
    • /
    • 2007
  • Blooms of Chattonella species are normally during summer in inland seas with high nutrients from the land and inflowing water. These blooms cause mass fish kills worldwide. We isolated a Chattonella strain from the south coast of Korea and identified it as C. antiqua. It is known that the morphological changes of phytoplankton correspond to the diurnal vertical migrations that follow an intrinsic biological clock and a nutrient acquisition mechanism during the day and night. In electron micrographs, C. antiqua clearly showed a radial distribution of lipid bodies in subcellular regions and plastids composed in which thylakoid layers were perpendicular to the surface. A single pyrenoid was present in each plastid and it was found at the end of the plastid towards the center of the cell. Throughout the day, plastids of C. antiqua cells appeared as an expanded net-like recticulum. During the night, however, the plastids changed their shape and contracted toward the cell periphery. The electron density of pyrenoids was increased in cells harvested during the night.

해수에서의 소독제 거동 예측 모델에 관한 연구 (Modeling of Chlorine Disinfectant Decay in Seawater)

  • 한지희;손진식
    • 상하수도학회지
    • /
    • 제30권1호
    • /
    • pp.9-17
    • /
    • 2016
  • Disinfectant/oxidation process is a crucial process in water treatment for supplying safe drinking water. Chlorination is still widely used for water treatment area due to its effectiveness on microbial inactivation and economic feasibility. Recently, disinfection concern in marine environment is increasing, for example, movement of hazardous marine organism due to ballast water, marine environmental degradation due to power plant cooling water discharge, and increase of the amount of disinfectant in the offshore plant. It is needed to conduct the assessment of disinfectant behavior and the development of disinfectant prediction model in seawater. The appropriate prediction model for disinfectant behavior is not yet provided. The objective of the study is to develop chlorine decay model in seawater. Various model types were applied to develop the seawater chlorine decay model, such as first order decay model, EPA model, and two-phase model. The model simulation indicated that chlorine decay in seawater is influenced by both organic and inorganic matter in seawater. While inorganic matter has a negative correlation with the chlorine decay, organic matter has a positive correlation with the chlorine decay.

Zooplankton and Phytoplankton Dynamics with the Construction of River Mouth Dam in Kum River Estuary, Korea

  • Kim, Say-Wa;Han, Myung-Soo;Lee, Kyung;Choi, Young-Kil;Yoo, Kwang-Il
    • 생태와환경
    • /
    • 제35권2호통권98호
    • /
    • pp.141-144
    • /
    • 2002
  • The construction of river mouth dam has prevented seawater from backwarding to upstream in Kum river estuary since 1990. Field observation on environmental factors, and zooplankton and phytoplankton dynamics have been carried out three times with two month interval in the summer and autumn in 2000 at three selected stations in Kum river estuary. Blockade of seawater flowing backward to upstream caused sharp contrast of zooplankton fauna and phytoplankton flora between upstream and downstream of the river mouth dam. Freshwater cladocerans i.e., Bosmina longisrostris and Daphnia galeata dominated in the upstream, and marine copepods of Acartia omorii and Paracalanus crassirostris occurred abundantly in downstream of the dam. Freshwater diatoms did not distributed in the downstream of the dam except Melosira varians, while marine diatom of Cylidrotheca closterium occurred in benthic waters bath in upstream and downstream of the dam. The construction of the river mouth dam seems to play an ecological role to blockade the input of marine organism into the upstream in Kum river estuary.

무안만 초입 인근 갯벌의 대형저서동물 분포 특성 (Distribution of Macrobenthos at the Mudflat in the Mouth of Muan Bay)

  • 최보현;이경선
    • 한국해양생명과학회지
    • /
    • 제2권2호
    • /
    • pp.75-82
    • /
    • 2017
  • 대형저서동물은 갯벌에서 우점을 차지하고 있으며, 저서환경을 유지하고 환경을 정화하는데 중요한 역할을 담당하고 있다. 퇴적환경에서 유기물 함량은 저서동물의 서식, 먹이행동, 생존 등에 영향을 미치게 된다. 본 연구에서는 무안만 초입의 목포연안 인근갯벌(목포지역과 압해지역)에서 유기물 함량과 저서동물 분포 특성에 대해서 조사하였다. 목포지역은 압해지역에 비해 높은 유기물 함량을 보였으며, 오염지표종인 Musculista senhousia가 우점을 차지하였다. 무안만 초입 인근 갯벌에서 대형저서동물의 분포는 퇴적층 유기물 함량과 유의적 상관관계를 나타내며 두 지역으로 나누어졌다.

극지해양 Pseudoalteromonas 유래의 소형 플라스미드에 기반한 Pseudoalteromonas - Escherichia coli 셔틀벡터 제작 (Construction of Pseudoalteromonas - Escherichia coli shuttle vector based on a small plasmid from the marine organism Pseudoalteromonas)

  • 김덕규;박하주;박현
    • 미생물학회지
    • /
    • 제52권1호
    • /
    • pp.110-115
    • /
    • 2016
  • 남극 해양세균 Pseudoalteromonas sp. PAMC 21150에서 분리한 소형 플라스미드(small plasmid, pDK4)의 크기는 3,480bp이고 G+C 함량은 41.64%이며, 3개의 open reading frames(ORFs)을 포함하고 있다. 3개의 ORF는 replication initiation protein (RepA), conjugative mobilization protein (Mob), 그리고 기능이 밝혀지지 않은 단백질을 코팅하고 있다. PCR 반응으로 증폭한 pDK4를 Escherichia coli high-copy pUC19 클로닝 벡터에 삽입하여 fusion vector (pDOC153)를 제작하였고, pDOC 153에 chloramphenicol 저항성 유전자를 삽입하여 ampicillin/chloramphenicol 저항성 Pseudoalteromonas - Escherichia coli 셔틀 벡터(shuttle vector; 7,216 bp 크기; pDOC155)를 제작하였다. 북극 해양세균 P. issachenkonii PAMC 22718이 보유한 2개의 유전자(TonB-dependent receptor gene, chi22718_IV, and exochitinase gene, chi22718_III)를 pDOC155에 삽입하여 두 개의 pDOC155 변형체(pDOC158, pDOC165)를 제작하였다. pDOC158 혹은 pDOC165을 이용하여 triparental mating 방법에 의해 플리스미드 미보유 해양세균인 Pseudoalteromonas sp. PAMC 22137를 형질전환하였다. PCR을 이용한 유전자 증폭실험을 통해서, pDOC158와 pDOC165에 삽입된 유전자들은 Pseudoalteromonas sp. PAMC 22137와 E. coli $DH5{\alpha}$ 내에서 안정적으로 유지되는 것을 확인하였다. 위의 결과는 셔틀 벡터 pDOC155는 Pseudoalteromonas spp. 유래 유전자들을 다른 Pseudoalteromonas spp. 세포 안으로 전달할 수 있는 새로운 유전자 전달시스템으로 이용될 수 있음을 보여주었다.

Immune Enhancement Effect of Asterias amurensis Fatty Acids through NF-κB and MAPK Pathways on RAW 264.7 Cells

  • Monmai, Chaiwat;Go, Seok Hyeon;Shin, Il-shik;You, SangGuan;Lee, Hyungjae;Kang, SeokBeom;Park, Woo Jung
    • Journal of Microbiology and Biotechnology
    • /
    • 제28권3호
    • /
    • pp.349-356
    • /
    • 2018
  • Asterias amurensis is a marine organism that causes damage to the fishing industry worldwide; however, it has been considered a promising source of functional components. The present study aimed to investigate the immune-enhancing effects of fatty acids from three organs of A. amurensis on murine macrophages (RAW 264.7 cells). A. amurensis fatty acids boosted production of immune-associated factors such as nitric oxide (NO) and prostaglandin E2 in RAW 264.7 cells. A. amurensis fatty acids also enhanced the expression of critical immune-associated genes, including iNOS, $TNF-{\alpha}$, $IL-1{\beta}$, and IL-6, as well as COX-2. Western blotting showed that A. amurensis fatty acids stimulated the $NF-{\kappa}B$ and MAPK pathways by phosphorylation of $NF-{\kappa}B$ p-65, p38, ERK1/2, and JNK. A. amurensis fatty acids from different tissues resulted in different levels of $NF-{\kappa}B$ and MAPK phosphorylation in RAW 264.7 cells. The results increase our understanding of how A. amurensis fatty acids boost immunity in a physiological system, as a potential functional material.

Evaluation of phlorofucofuroeckol-A isolated from Ecklonia cava (Phaeophyta) on anti-lipid peroxidation in vitro and in vivo

  • Lee, Ji-Hyeok;Ko, Ju-Young;Oh, Jae-Young;Kim, Eun-A;Kim, Chul-Young;Jeon, You-Jin
    • ALGAE
    • /
    • 제30권4호
    • /
    • pp.313-323
    • /
    • 2015
  • Lipid peroxidation means the oxidative degradation of lipids. The process from the cell membrane lipids in an organism is generated by free radicals, and result in cell damage. Phlorotannins, well-known marine brown algal polyphenols, have been utilized in functional food supplements as well as in medicine supplements to serve a variety of purposes. In this study, we assessed the potential anti-lipid peroxidation activity of phlorofucofuroeckol-A (PFF-A), one of the phlorotannins, isolated from Ecklonia cava by centrifugal partition chromatography in 2,2-azobis (2-amidinopropane) dihydrochloride (AAPH)-stimulated Vero cells and zebrafish system. PFF-A showed the strongest scavenging activity against alkyl radicals of all other reactive oxygen species (ROS) and exhibited a strong protective effect against ROS and a significantly strong inhibited of malondialdehyde in AAPH-stimulated Vero cells. The apoptotic bodies and pro-apoptotic proteins Bax and caspase-3, which were induced by AAPH, were strongly inhibited by PFF-A in a dose-dependent manner and expression of Bcl-xL, an anti-apoptotic protein, was induced. In the AAPH-stimulated zebrafish model, additionally PFF-A significantly inhibited ROS and cell death, as well as exhibited a strong protective effect against lipid peroxidation. Therefore, these results suggest that PFF-A has excellent protective effects against ROS and lipid peroxidation induced by AAPH in both an in vitro Vero cell model and an in vivo zebrafish model.

Anti-Inflammatory Effect of Asterias amurensis Fatty Acids through NF-κB and MAPK Pathways against LPS-Stimulated RAW264.7 Cells

  • Monmai, Chaiwat;Go, Seok Hyeon;Shin, Il-sik;You, SangGuan;Kim, Dae-ok;Kang, SeokBeom;Park, Woo Jung
    • Journal of Microbiology and Biotechnology
    • /
    • 제28권10호
    • /
    • pp.1635-1644
    • /
    • 2018
  • Asterias amurensis (starfish) is a marine organism that is harmful to the fishing industry, but is also a potential source of functional materials. The present study was conducted to analyze the profiles of fatty acids extracted from A. amurensis tissues and their anti-inflammatory effects on RAW264.7 macrophage cells. In different tissues, the component ratios of saturated fatty acids, monounsaturated fatty acids, and polyunsaturated fatty acids differed; particularly, polyunsaturated fatty acids such as dihomo-gamma-linolenic acid (20:3n-6) and eicosapentaenoic acid (20:5n-3) were considerably different. In lipopolysaccharide-stimulated RAW264.7 cells, fatty acids from A. amurensis skin, gonads, and digestive glands exhibited anti-inflammatory activities by reducing nitric oxide production and inducing nitric oxide synthase gene expression. Asterias amurensis fatty acids effectively suppressed the expression of inflammatory cytokines such as tumor necrosis $factor-{\alpha}$, interleukin-$1{\beta}$, and interleukin-6 in lipopolysaccharide-stimulated cells. Cyclooxygenase-2 and prostaglandin $E_2$, which are critical inflammation biomarkers, were also significantly suppressed. Furthermore, A. amurensis fatty acids reduced the phosphorylation of nuclear $factor-{\kappa}B$ p-65, p38, extracellular signal-related kinase 1/2, and c-Jun N-terminal kinase, indicating that these fatty acids ameliorated inflammation through the nuclear $factor-{\kappa}B$ and mitogen-activated protein kinase pathways. These results provide insight into the anti-inflammatory mechanism of A. amurensis fatty acids on immune cells and suggest that the species is a potential source of anti-inflammatory molecules.