• Animal cells and systems
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• v.15 no.3
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• pp.251-258
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• 2011

Ciliates are considered one of the most diverse protozoa and play significant roles in ecology. For successful taxonomic study of these microscopic eukaryotes, a staining procedure is necessary, due mainly to intrinsic difficulties in recognizing characteristics from living cells. Although molecular taxonomy has been used to resolve the ambiguities associated with traditional morphology-based taxonomy, extraction of genomic DNA from stained ciliate cells is not available yet. In the present study, we describe a method to extract genomic DNA from a single protargol-impregnated euplotid cell. By using $HgCl_2$ as a fixative and modulating the exposure time of bleach solution in the protargol impregnation, high-quality genomic DNA can successfully be extracted from a stained single cell with minimal loss of morphological integrity. This technique will contribute to the effectiveness of combined approaches of molecular and morphological taxonomy from single ciliate cells.

• ALGAE
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• v.32 no.4
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• pp.285-308
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• 2017

Cochlodinium polykrikoides red tides have caused great economic losses in the aquaculture industry in many countries. To investigate the roles of metazooplankton in red tide dynamics of C. polykrikoides in the South Sea of Korea, the abundance of metazooplankton was measured at 60 stations over 1- or 2-week intervals from May to November 2014. In addition, the grazing impacts of dominant metazooplankton on red tide species and their potential heterotrophic protistan grazers were estimated by combining field data on the abundance of red tide species, heterotrophic protist grazers, and dominant metazooplankton with data obtained from the literature concerning ingestion rates of the grazers on red tide species and heterotrophic protists. The mean abundance of total metazooplankton at each sampling time during the study was 297-1,119 individuals $m^{-3}$. The abundance of total metazooplankton was significantly positively correlated with that of phototrophic dinoflagellates (p < 0.01), but it was not significantly correlated with water temperature, salinity, and the abundance of diatoms, euglenophytes, cryptophytes, heterotrophic dinoflagellates, tintinnid ciliates, and naked ciliates (p > 0.1). Thus, dinoflagellate red tides may support high abundance of total metazooplankton. Copepods dominated metazooplankton assemblages at all sampling times except from Jul 11 to Aug 6 when cladocerans and hydrozoans dominated. The calculated maximum grazing coefficients attributable to calanoid copepods on C. polykrikoides and Prorocentrum spp. were 0.018 and $0.029d^{-1}$, respectively. Therefore, calanoid copepods may not control populations of C. polykrikoides or Prorocentrum spp. Furthermore, the maximum grazing coefficients attributable to calanoid copepods on the heterotrophic dinoflagellates Polykrikos spp. and Gyrodinium spp., which were grazers on C. polykrikoides and Prorocentrum spp., respectively, were 0.008 and $0.047d^{-1}$, respectively. Therefore, calanoid copepods may not reduce grazing impact by these heterotrophic dinoflagellate grazers on populations of the red tide dinoflagellates.

• Ocean and Polar Research
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• v.30 no.3
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• pp.289-301
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• 2008

Community structure of heterotrophic protists and their grazing impact on phytoplankton were studied in Northwest Pacific Ocean during October, 2007. The study area was divided into four regions based on physical properties (temperature and salinity) and chlorophyll-a distribution. They were Region I of North Equatorial Currents, Region II of Kuroshio waters, Region III of shelf mixed water, and Region IV of Tsushima warm current from East China Sea. The distribution of chlorophyll-a concentrations and community structure of heterotrophic protists were significantly affected by physical properties of the water column. The lowest concentration of chlorophyll-a was identified in Region I and II, where pico-sized chlorophyll-a was most dominant (>80% of total chlorophyll-a). Biomass of heterotrophic protists was also low in Region I and II. However, Region III was characterized by low salinity and temperature and high chlorophyll-a concentration, with relatively lower pico-sized chlorophyll-a dominance. The Highest biomass of heterotrophic protists appeared in Region III, along with the relatively less important nanoprotists. In Region I, II and IV, heterotrophic dinoflagellates were dominant among the protists, while ciliates were dominant in Region III. Community structure varied with physical(salinity and temperature) and biological (chlorophyll-a) properties. Biomass of heterotrophic protists correlated well with chlorophyll-a concentration in the study area ($r^2=0.66$, p<0.0001). The potential effect of grazing activity on phytoplankton is relatively high in Region I and II. Our result suggest that biomass and size structure of heterotrophic protists might be significantly influenced by phytoplankton size and concentration.

• Animal Systematics, Evolution and Diversity
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• v.28 no.3
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• pp.168-177
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• 2012

Two stichotrichid ciliates, collected from marine waters in Jeju Island, were identified as Afroamphisiella multinucleata Foissner et al., 2002 and Pseudokahliella marina (Foissner et al., 1982) Berger et al., 1985. They are recorded for the first time in Korea. The descriptions are based on examinations of living as well as protargol-impregnated specimens. These species are characterized as follows. Afroamphisiella multinucleata has a body size in vivo of $70-95{\times}20-35{\mu}m$; elongate rectangular in shape; contractile vacuole located slightly above mid-body. The adoral zone is bipartited into 3 distal and 13-17 proximal membranelles and occupies 28-35% of the body length. The frontal row comprises 1-4 cirri and one buccal cirrus. The amphisiellid median cirral row is composed of 14-21 cirri, 10-19 left marginal cirri, and 21-30 right marginal cirri. Cortical granules are yellowish. 11-20 globular/ellipsoidal macronuclear nodules arrange proximally along the cell margins. Pseudokahliella marina has a body size in vivo of $110-195{\times}40-110{\mu}m$ and broadly elliptical in shape. The adoral zone of the membranelles occupies 50-60% of the body length, and is composed of 41-70 membranelles. A prominent frontal scutum is present. The contractile vacuole is located below the mid-body. There are 11-13 frontoventral rows, including marginal rows. Caudal cirri and transverse cirri are absent. Three invariable non-fragmented bipolar dorsal kineties are present. The left and right marginal rows are composed of 22-35 and 28-40 cirri, respectively. Colourless cortical granules are present. 8-11 spherical/ellipsoidal macronuclear nodules are connected with each other by thread-like tructures, forming an inverted C-shape.

• Proceedings of the Korean Aquaculture Society Conference
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• 2004.05a
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• pp.505-505
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• 2004

Pathological conditions of Pacific oysters were surveyed in some coastal areas of Korea. Samples of 30 to 45 oysters were collected in Kamakman, Masan and in Gosung Bay. Protozoan includes gregarine-like organism, Marteilioides chungmuensis, Haplosporidium; ciliates Ancitrocoma and Metazoa (termatode, nematode, copepod) were observed in samples from most of the sampling areas. Marteilioides chungmuensis was found in all sampling sites. Protozoan, Halosporidium sp. and Ancistrocoma sp. occurred in oysters from Gosung Bay (year 2000) with very low prevalence. Trematode Gymnophalloides was frequently found in oysters from all studied areas. Inflammation was frequently observed in oysters infected with M. chungmuensis and Pseudomyicola. The damaged structures were found in digestive tubes of oysters infected by Halosporidium sp. and Pseudomyicola sp. Some of the parasites and pathological status could associate with the conditions of oysters and the environment.

• Animal Systematics, Evolution and Diversity
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• v.35 no.4
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• pp.186-190
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• 2019

DNA barcoding of two marine tintinnids, Eutintinnus rectus and Schmidingerella arcuata, was performed using four samples collected from different sites in the north-eastern coast of South Korea. The loricae morphology was observed by light and scanning electron microscopy. Molecular data were analyzed using five nuclear ribosomal DNA markers(18S, ITS1, 5.8S, ITS2, and 28S genes) and one mitochondrial marker (CO1 gene). The intraspecific pairwise differences of E. rectus and S. arcuata in the CO1 gene were 0.0-0.2% and 0.0-0.6%, respectively, while there were no differences in the 18S rDNA sequences.

• Journal of Species Research
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• v.11 no.2
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• pp.108-116
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• 2022

During a field survey to report unrecorded Korean ciliates, we collected five anaerobic ciliate species in two samples from freshwater and marine environments. These species belong to the classes Armophorea and Plagiopylea. The morphology of these species was studied based on live observations, protargol impregnation, and scanning electron microscope. Brachonella contorta is characterized by a size of 80-100×40-60 ㎛ in vivo, a bullet-shaped body, and about 60 oral polykinetids making 360° spiral around long axis. Brachonella pulchra is characterized by a size of 80-110×50-70 ㎛ in vivo and adoral zone composed of about 40 oral polykinetids with minimal spiralization. Metopus setosus is characterized by a size of 45-70×20-30 ㎛ in vivo, about 22 ciliary rows, very long caudal cilia, and 20 oral polykinetids. Plagiopyla nasuta is a freshwater species characterized by a size of 80-120×50-60 ㎛ in vivo, striated band present, straight extrusomes, and about 70 somatic ciliary rows. The marine Plagiopyla frontata is characterized by a size of 80-120×40-60 ㎛ in vivo, an oval to ellipsoid body shape, 50-60 somatic ciliary rows, and curved extrusomes.

• ALGAE
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• v.32 no.3
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• pp.199-222
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• 2017

Occurrence of Cochlodinium polykrikoides red tides have resulted in considerable economic losses in the aquaculture industry in many countries, and thus predicting the process of C. polykrikoides red tides is a critical step toward minimizing those losses. Models predicting red tide dynamics define mortality due to predation as one of the most important parameters. To investigate the roles of heterotrophic protists in red tide dynamics in the South Sea of Korea, the abundances of heterotrophic dinoflagellates (HTDs), tintinnid ciliates (TCs), and naked ciliates (NCs) were measured over one- or two-week intervals from May to Nov 2014. In addition, the grazing impacts of dominant heterotrophic protists on each red tide species were estimated by combining field data on red tide species abundances and dominant heterotrophic protist grazers with data obtained from the literature concerning ingestion rates of the grazers on red tide species. The abundances of HTDs, TCs, and NCs over the course of this study were high during or after red tides, with maximum abundances of 82, 49, and $35cells\;mL^{-1}$, respectively. In general, the dominant heterotrophic protists differed when different species caused red tides. The HTDs Polykrikos spp. and NCs were abundant during or after C. polykrikoides red tides. The mean and maximum calculated grazing coefficients of Polykrikos spp. and NCs on populations of co-occurring C. polykrikoides were $1.63d^{-1}$ and $12.92d^{-1}$, respectively. Moreover, during or after red tides dominated by the phototrophic dinoflagellates Prorocentrum donghaiense, Ceratium furca, and Alexandrium fraterculus, which formed serial red tides prior to the occurrence of C. polykrikoides red tides, the HTDs Gyrodinium spp., Polykrikos spp., and Gyrodinium spp., respectively were abundant. The maximum calculated grazing coefficients attributable to dominant heterotrophic protists on co-occurring P. donghaiense, C. furca, and A. fraterculus were 13.12, 4.13, and $2.00d^{-1}$, respectively. Thus, heterotrophic protists may sometimes have considerable potential grazing impacts on populations of these four red tide species in the study area.

• Ocean and Polar Research
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• v.29 no.4
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• pp.401-410
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• 2007

In Korea the study of marine heterotrophic protists started in the late 1980s, and since the early 1990s many studies have been conducted in various marine environments. In this article, studies on the distribution and abundance of protists and the biotic interactions(bacteria-protists, phytoplankton-protists) conducted in Korean coastal waters are reviewed, and a field study is reported and discussed. The field study in Masan Bay was carried out from February 2004 to November 2005 at seven selected stations representative of the bay. During the study, the mean abundance of heterotrophic bacteria and the mean concentration of chlorophyll-a were $2.1{\times}10^6\;cells\;mL^{-1}$ and $9.8{\mu}g\;L^{-1}$, respectively. Heterotrophic protists consisted of heterotrophic dinoflagellates, heterotrophic nanoflagellates(excluding dinoflagellates) and ciliates, and their abundances were means of $7.9{\times}10^4\;cells\;L^{-1}$, $1.2[\times}10^3\;cells\;mL^{-1}$, and $4.0{\times}10^4\;cells\;L^{-1}$, respectively. Generally, the chlorophyll-a concentra+CZ14tions and the abundances of heterotrophic bacteria and protists were higher in the inner zone of the bay, where there are high concentrations of organic matters, than in the middle and outer zones. Using the grazing rates of heterotrophic nanoflagellates on bacteria previously reported in this area, it can be calculated that about 69% of bacterial producton was removed by HNF grazing activity. About 24% of initial chlorophyll-a concentration was removed by microzooplankton grazing activity. In conclusion, this study suggests that in Masan Bay heterotrophic protists control the growth of bacteria and phytoplankton, and heterotrophic protists represent an important link of bacterial & microalgal biomass to higher trophic levels.

• Ocean and Polar Research
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• v.29 no.4
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• pp.327-337
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• 2007

Plankton communities have close relationships with environmental changes in water columns. Thus, the use of plankton as a biological tool for assessing the marine ecosystem health may be effective. Major issue regarding coastal pollution has been usually recognized as phytoplankton blooms or red tides caused by the eutrophication, an increase in concentration of inorganic nutrients such as nitrogen and phosphorus. However, in order to understand the effects of the overall pollution on marine ecosystem, the organic pollutants as well as the inorganic nutrients should be also considered. For understanding the effects of the organic pollution, among the planktonic organisms, heterotrophic bacteria, heterotrophic flagellates and ciliates should be investigated. Generally, there are three approaches for assessing the marine ecosystem health using the plankton taxa or plankton communities. The first one is a community-based approach such as diversity index and chlorophyll a concentration which are common in analysis of the plankton communities. The second is an indiviual-based approach which is to monitor the pollution indicative species. This approach needs one's ability to identify the plankton to species level. The last approach is a bioassay of toxicity, which can be applied to the plankton. A pilot study in Masan Bay was conducted to assess the effects of the inorganic and organic pollution. In this article, a new approach using plankton communities was tentatively presented as a biological tool for assessing the ecosystem health of Masan Bay.