• Title/Summary/Keyword: marine bio

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Characterization of L-asparaginase-producing Trichoderma spp. Isolated from Marine Environments

  • Woon-Jong, Yu;Dawoon, Chung;Yong Min, Kwon;Seung Sub, Bae;Eun-Seo, Cho;Hye Suck, An;Grace, Choi
    • Journal of Marine Life Science
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    • v.7 no.2
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    • pp.121-128
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    • 2022
  • L-asparaginase (ASNase) is a therapeutic enzyme used to treat acute lymphoblastic leukemia. Currently, the most widely used ASNases are originated from bacteria. However, owing to the adverse effects of bacterial ASNases, new resources for ASNase production should be explored. Fungal enzymes are considered efficient and compatible resources of natural products for diverse applications. In particular, fungal species belonging to the genus Trichoderma are well-known producers of several commercial enzymes including cellulase, chitinase, and xylanase. However, enzyme production by marine-derived Trichoderma spp. remains to be elucidated. While screening for extracellular ASNase-producing fungi from marine environments, we found four strains showing extracellular ASNase activity. Based on the morphological and phylogenetic analyses using sequences of translation elongation factor 1-alpha (tef1α), the Trichoderma isolates were identified as T. afroharzianum, T. asperellem, T. citrinoviride, and Trichoderma sp. 1. All four strains showed different ASNase activities depending on the carbon sources. T. asperellem MABIK FU00000795 showed the highest ASNase value with lactose as a carbon source. Based on our findings, we propose that marine-derived Trichoderma spp. are potential candidates for novel ASNase production.

Marine Bioprocess Engineering: Building Bridges from Discovery to Commercialization of Marine Natural Products

  • Zhang, Wei;Jin, Meifeng;Yu, Xinju;Deng, Maicun;Yuan, Quan
    • 한국생물공학회:학술대회논문집
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    • 2000.11a
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    • pp.137-140
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    • 2000
  • Numerous novel marine natural products have been discovered and isolated from varied marine organisms by the diligent bio-prospectors over the past decades. An assessment of the current status of commercial development of these natural compounds indicates only minimal commercialization due to the lack of sustainable supply. To bridge the gaps between discovery and commercialization of these tantalizing bioactive compounds, marine bioprocess engineering is the key for its success. The problems, challenges and opportunities for marine bioprocess engineers are examined for the timely transformation of the discovery into commercial reality. Marine bioprocess engineers will find it the most rewarding practice of their expertise in diving into the ocean.

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A study on the status and administrative supports for domestic marine biotechnology industry (해양생명공학 산업의 현황과 정부지원 방안에 관한 연구)

  • 이흥동
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.8 no.2
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    • pp.53-60
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    • 2002
  • Marine biotechnology is one of the promising frontier of scientific exploration and commercial utilization for the next century. Compared with the terrestrial environment, the oceans of the world remain largely unexplored and include a major portion of bio-resources. Using the tools of biotechnology, the vast and diverse marine resources can be applied to produce new products and foods. Marine biotechnology has the characteristics of pro-environment, saying energy, and intensive knowledge. Therefore, we can take advantage of the marine biotechnology industry under our situation with the poor natural resources. The study focuses on the current status and administrative supports on marine biotechnology industry for upgrading the economic value of output. The status of our marine biotechnology industry is beginning stage in the economic aspects. Manpower and the level of most technologies are weaker than the ones of the advanced countries. More investment and recruiting skilled specialists are necessary because the improvement of marine biotechnology is depend on the technology and scientists. This study suggests the ways of administrative supports for domestic marine biotechnology: Efficient information network and supporting system for the development of marine biotechnology should be interrelated with other technical and scientific fields; The government should provide sustainable fund for the long-term research project and the infrastructure in the marine biotechnology.

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Transcriptional Activity of an Estrogen Receptor β Subtype in the Medaka Oryzias dancena

  • Maeng, Sejung;Yoon, Sung Woo;Kim, Eun Jeong;Nam, Yoon Kwon;Sohn, Young Chang
    • Development and Reproduction
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    • v.23 no.4
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    • pp.333-344
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    • 2019
  • In vertebrate reproductive system, estrogen receptor (ER) plays a pivotal role in mediation of estrogenic signaling pathways. In the present study, we report the cDNA cloning, expression analysis, and transcriptional activity of ERβ1 subtype from medaka Oryzias dancena. The deduced O. dancena ERβ1 (odERβ1; 519 amino acids) contained six characteristic A/B to E/F domains with very short activation function 2 region (called AF2). A phylogenetic analysis indicated that odERβ1 was highly conserved among teleost ERβ1 subgroup. A conventional RT-PCR revealed that the odERβ1 transcripts were widely distributed in the multiple tissues, the ovary, brain, gill, intestine, kidney, and muscle. Further, the relatively higher odERβ1 expressions in the ovary and brain were clearly reproduced in RT-qPCR assay. When HA-fused odERβ1 expression vector was transfected into HEK293 cells, an immunoreactivity for odERβ1 was mainly detected in the nucleus part. Finally, an estrogen responsive element driven luciferase reporter assays demonstrated that the transcriptional activity of odERβ1 significantly increased by estradiol-17β (E2) in a dose dependent manner (p<0.05). However, fold-activation of odERβ1 in the presence of E2 was markedly weak, when it compared with those of O. latipes ERβ1. Taken together, these data suggest that odERβ1 represents a functional variant of teleost ERβ subtype and provides a basic tool allowing future studies examining the function of F domain of ERβ1 subtype and expanding our knowledge of ERβ evolution.

Prediction of potential habitats and distribution of the marine invasive sea squirt, Herdmania momus

  • Park, Ju-Un;Lee, Taekjun;Kim, Dong Gun;Shin, Sook
    • Korean Journal of Environmental Biology
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    • v.38 no.1
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    • pp.179-188
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    • 2020
  • The influx of marine exotic and alien species is disrupting marine ecosystems and aquaculture. Herdmania momus, reported as an invasive species, is distributed all along the coast of Jeju Island and has been confirmed to be distributed and spread to Busan. The potential habitats and distribution of H. momus were estimated using the maximum entropy (MaxEnt) model, quantum geographic information system (QGIS), and Bio-ocean rasters for analysis of climate and environment(Bio-ORACLE), which can predict the distribution and spread based only on species occurrence data using species distribution model (SDM). Temperature and salinity were selected as environmental variables based on previous literature. Additionally, two different representative concentration pathway (RCP) scenarios (RCP 4.5 and RCP 8.5) were set up to estimate future and potential habitats owing to climate change. The prediction of potential habitats and distribution for H. momus using MaxEnt confirmed maximum temperature as the highest contributor(77.1%), and mean salinity, the lowest (0%). And the potential habitats and distribution of H. momus were the highest on Jeju Island, and no potential habitat or distribution was seen in the Yellow Sea. Different RCP scenarios showed that at RCP 4.5, H. momus would be distributed along the coast of Jeju Island in the year 2050 and that the distribution would expand to parts of the Korea Strait by the year 2100. RCP 8.5, the distribution in 2050 is predicted to be similar to that at RCP 4.5; however, by 2100, the distribution is predicted to expand to parts of the Korea Strait and the East Sea. This study can be utilized as basic data to effectively control the ecological injuries by H. momus by predicting its spread and distribution both at present and in the future.

The Hatching Rate of Resting Eggs of the Rotifer Brachionus plicatilis according to Preservation Method (보관 방법에 따른 Rotifer Brachionus plicatilis 내구란의 부화)

  • Youn, Joo-Yeon;Hur, Sung-Bum
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.44 no.6
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    • pp.665-670
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    • 2011
  • The rotifer Brachionus plicatilis is one of the most important food organisms in aquaculture. The resting eggs produced by mictic female rotifers are easily stored and hatched, making them useful as the starter for the mass culture of rotifers in marine larval culture. This study examined the optimum preservation method for resting eggs to ensure a high hatching rate. To produce resting eggs, the marine rotifer B. plicatilis was cultured with Nannochloris oculata (KMMCC 16). The resting eggs were harvested and cryopreserved using 5% and 10% methanol (MeOH), dimethylsulfoxide (DMSO), and glycerol as cryoprotectant agents (CPAs). The cryopreservation comprised slow or rapid freezing and the resting eggs were stored for one month in liquid nitrogen ($-196^{\circ}C$). The resting eggs were also dried at different temperatures (30, 40, and $50^{\circ}C$) and for different times (1, 2, and 3 h). In general, the hatching rates of the resting eggs preserved with CPA were higher than those without CPA and the slow freezing method was better than the rapid freezing method. However, the optimum CPA concentration for the hatching rate of the resting eggs varied with the freezing method and kind of CPA, and the CPA also affected the viability of the resting eggs. Dried resting eggs had a high, rapid hatching rate over 80%. The moisture content of the resting eggs cryopreserved in liquid nitrogen affected the hatching rate. Drying at $30^{\circ}C$ for 1 hour resulted in a high hatching rate of the resting eggs. In conclusion, drying at $30^{\circ}C$ for 1 hour and preservation in liquid nitrogen with the slow freezing method, without CPA, is recommended for a high hatching rate (ca. 95%) of rotifer resting eggs.

Influence of Temperature and Salinity on the Growth and Size of the Rotifer Brachionus plicatilis and B. rotundiformis (온도와 염분이 Rotifer Brachionus plicatilis와 B. rotundiformis의 성장과 크기에 미치는 영향)

  • Youn, Joo-Yeon;Hur, Sung-Bum
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.44 no.6
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    • pp.658-664
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    • 2011
  • Rotifers of the genus Brachionus are commonly used as a live food for larval fish, and rotifers of different sizes are preferred according the mouth size of the fish. Rotifer species vary in size, and individual size can depend on the temperature and salinity of the rearing environment. We investigated the effects of temperature and salinity for two species, B. plicatilis (250-300 ${\mu}m$) and B. rotundiformis (100-220 ${\mu}m$). Two strains of B. plicatilis (CCUMP 36 and 48) and two strains of B. rotundiformis (CCUMP 51 and 56) were received from the Culture Collection of Useful Marine Plankton (CCUMP) at Pukyong National University and cultured with the green alga, Nannochloris oculata (KMMCC 16) from the Korea Marine Microalgal Culture Center (KMMCC). The growth and size of rotifers were examined at three water temperatures ($16^{\circ}C$, $24^{\circ}C$, $32^{\circ}C$) and four salinities (20 psu, 25 psu, 30 psu, 35 psu) under continuous light (40 ${\mu}molm^{-2}s^{-1}$). The maximum density and growth rate of B. rotundiformis were greater than those of B. plicatilis. The lorica length of B. plicatilis ranged from 215.4 to 269.7 ${\mu}m$ and from 154.9 to 206.6 ${\mu}m$ for B. rotundiformis, depending on strain, temperature and salinity. Rotifers were smaller when cultured at high temperatures, regardless of salinity. B. rotundiformis preferred higher salinity than B. plicatilis. The results demonstrated that the size of rotifers could be controlled to some extent by temperature and salinity.

Feeding Habits of Lateolabrax japonicus in the Coastal Waters off Dolsan-do, Yeosu (여수 돌산도 주변해역에서 출현하는 농어(Lateolabrax japonicus)의 식성)

  • Huh, Sung-Hoi;Park, Joo Myun;Park, Se Chang;Jeong, Dalsang;Park, Chan Il;Baeck, Gun Wook
    • Korean Journal of Ichthyology
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    • v.21 no.1
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    • pp.23-27
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    • 2009
  • The feeding habits of Lateolabrax japonicus were studied based on an examination of the stomach contents of 344 specimens collected monthly from January to December, 2005 in coastal waters off Dolsan-do, Yeosu. The standard length (SL) of specimens ranged in 8.7~52.8 cm. L. japonicus is a piscivore that consumes mainly teleosts such as Engraulis japonicus, Trachurus japonicus, and Acanthogobius flavimanus. Its diet also includes Macrura, Amphipoda, Cephalopoda, Polychaeta, Mysidacea, and Branchyura. Small individuals (<25 cm SL) consume mainly Amphipoda and Macrura. The proportion of these prey items decreases with increasing fish size, and this decrease paralleled the increased fish consumption.

Distribution and Characteristics of Pacific Herring Clupea pallasii Spawning Beds in Jinhae Bay, Korea (진해만에서의 청어(Clupea pallasii) 산란장 분포와 특성)

  • Moon, Seong Yong;Choi, Jung-Hwa;Lee, Hae-Won;Kim, Jung-Nyun;Heo, Jin Seok;Gwak, Woo Seock;Lee, Yong-Deuk
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.52 no.5
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    • pp.534-538
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    • 2019
  • The distribution and characteristics of spawning beds of the Pacific herring Clupea pallasii, were observed by scuba diving in Jinhae Bay, Korea, with a focus on marine vegetation as adhesive substrates and egg density during the spawning season. In 2017, the fertilized eggs of C. pallasii were mainly found attached to the leaves of algae species Carpopeltis cornea, Gracilaria textorii, and Acrosrium polyneurum at the rocky shore in Wonpo-dong and Jeodo. The mean density of fertilized eggs in C. pallasii spawning beds was $153,776eggs/m^2$ off Wonpo-dong and $856,430eggs/m^2$ off Jeodo, giving an estimated total of $5.345{\times}10^9$ eggs in Wonpo-dong and $3.3074{\times}10^{10}$ eggs in Jeodo. We examined spawning beds with an area of $38,619m^2$ off Wonpo-dong and $34,760m^2$ off Jeodo. The choice of spawning bed may be affected by the composition of marine vegetation, such as the algal diversity of rocky shore environments, which could affect adhesive substrates and egg density during the spawning season. The results of the present study suggest that the spawning season of C. pallasii in Jinhae Bay is in January to mid-February.

Anti-inflammatory effect of polyphenol-rich extract from the red alga Callophyllis japonica in lipopolysaccharide-induced RAW 264.7 macrophages

  • Ryu, BoMi;Choi, Il-Whan;Qian, Zhong-Ji;Heo, Soo-Jin;Kang, Do-Hyung;Oh, Chulhong;Jeon, You-Jin;Jang, Chul Ho;Park, Won Sun;Kang, Kyong-Hwa;Je, Jae-Young;Kim, Se-Kwon;Kim, Young-Mog;Ko, Seok-Chun;Kim, GeunHyung;Jung, Won-Kyo
    • ALGAE
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    • v.29 no.4
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    • pp.343-353
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    • 2014
  • Despite the extensive literature on marine algae over the past few decades, a paucity of published research and studies exists on red algae. The purpose of this study was to evaluate the potential therapeutic properties of the ethanol extract of the red alga Callophyllis japonica against lipopolysaccharide (LPS)-stimulated macrophage inflammation. The C. japonica extract (CJE) significantly inhibited the nitric oxide (NO) production and the induced dose-dependent reduction of the protein and mRNA levels of inducible nitric oxide synthase and cyclooxygenase-2. Additionally, the CJE reduced the mRNA levels of inflammatory cytokines, including tumor necrosis factor-${\alpha}$, interleukin (IL)-$1{\beta}$, and IL-6. We investigated the mechanism by which the CJE inhibits NO by examining the level of mitogen-activated protein kinases (MAPKs) activation, which is an inflammation-induced signaling pathway in macrophages. The CJE significantly suppressed the LPS-induced phosphorylation of c-Jun N-terminal kinase, extracellular signal-regulated kinase and p38 MAPK. Taken together, the results of this study demonstrate that the CJE inhibits LPS-induced inflammation by blocking the MAPK pathway in macrophages.