• Title/Summary/Keyword: l-diversity

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Endophytic Fungal Diversity Isolated from the Root of Halophytes in Taean Peninsula (태안반도에 자생하는 염생식물의 뿌리로부터 분리한 내생 진균의 다양성)

  • You, Young-Hyun;Lee, Myung-Chul;Kim, Jong-Guk
    • The Korean Journal of Mycology
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    • v.42 no.4
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    • pp.269-275
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    • 2014
  • Halophytes of seven species, Carex scabrifolia Steud., Limonium tetragonum Bullock, Salicornia europaea L., Suaeda glauca Bunge, Suaeda japonica Makino, Suaeda maritima Dumort., and Triglochin maritimum L. were collected from the Taean Peninsula. Thirty-seven endophytic fungi were isolated from the root of halophytes, and analyzed using the DNA sequences of internal transcribed spacers (ITS). The diversity of all endophytic fungi was analyzed using diversity indices. The endophytic fungi associated with the halophytes belonged to seven orders; Eurotiales (78%), Capnodiales (5%), Hypocreales (5%), Agaricales (3%), Corticiales (3%), Glomerellales (3%), and Pleosporales (3%). At the phylum level, the endophytic fungi were composed of Ascomycota and Basidiomycota. At the genus level, Alternaria, Aspergillus, Cladosporium, Paecilomyces, Penicillium, Phanerochaete, Schizophyllum, Talaromyces, and Verticillium were confirmed. Among them, Penicillium was the most abundant in the roots of the halophytes. This study analyzed the distribution and diversity of endophytic fungi on halophytes in the Taean Peninsula.

Molecular analysis of genetic diversity, population structure, and phylogeny of wild and cultivated tulips (Tulipa L.) by genic microsatellites

  • Pourkhaloee, Ali;Khosh-Khui, Morteza;Arens, Paul;Salehi, Hassan;Razi, Hooman;Niazi, Ali;Afsharifar, Alireza;Tuyl, Jaap van
    • Horticulture, Environment, and Biotechnology : HEB
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    • v.59 no.6
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    • pp.875-888
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    • 2018
  • Tulip (Tulipa L.) is one of the most important ornamental geophytes in the world. Analysis of molecular variability of tulips is of great importance in conservation and parental lines selection in breeding programs. Of the 70 genic microsatellites, 15 highly polymorphic and reproducible markers were used to assess the genetic diversity, structure, and relationships among 280 individuals of 36 wild and cultivated tulip accessions from two countries: Iran and the Netherlands. The mean values of gene diversity and polymorphism information content were 0.69 and 0.66, respectively, which indicated the high discriminatory power of markers. The calculated genetic diversity parameters were found to be the highest in wild T. systola Stapf (Derak region). Bayesian model-based STRU CTU RE analysis detected five gene pools for 36 germplasms which corresponded with morphological observations and traditional classifications. Based on analysis of molecular variance, to conserve wild genetic resources in some geographical locations, sampling should be performed from distant locations to achieve high diversity. The unweighted pair group method with arithmetic mean dendrogram and principal component analysis plot indicated that among wild tulips, T. systola and T. micheliana Hoog exhibited the closest relationships with cultivated tulips. Thus, it can be assumed that wild tulips from Iran and perhaps other Middle East countries played a role in the origin of T. gesneriana, which is likely a tulip species hybrid of unclear origin. In conclusion, due to the high genetic variability of wild tulips, they can be used in tulip breeding programs as a source of useful alleles related to resistance against stresses.

Comparison of Microbial Diversity of Korean Commercial Makgeolli Showing High ${\beta}$-Glucan Content and High Antihypertensive Activity, Respectively

  • Min, Jin-Hong;Kim, Young-Hun;Kim, Jae-Ho;Choi, Shin-Yang;Lee, Jong-Soo;Kim, Ha-Kun
    • Mycobiology
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    • v.40 no.2
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    • pp.138-141
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    • 2012
  • We measured physiological functionalities, including antihypertensive angiotensin I-converting enzyme inhibitory activity and immun-stimulating ${\beta}$-glucan content for sixty kinds of Makgeolli that is commercially available from the market. As a result, we selected R-12 commercial raw Makgeolli, with a high content of immuno-stimulating ${\beta}$-glucan, and R-14 commercial raw Makgeolli, exhibiting high antihypertensive activity. Due to the similarities in their overall physicochemical properties and raw materials used for fermentation, we compared the microbial flora in order to investigate the reason for the differences in their functionalities. Nested PCR and denaturing gradient gel electrophoresis for yeasts and bacteria were performed for analysis of microbial diversity of two different kinds of Makgeolli (i.e., R-12, R-14), which showed immuno-stimulating ${\beta}$-glucan content and exhibited a very high level of antihypertensive activity, respectively. Analysis of the 18S rDNA amplicon revealed a major presence of the yeast strain Pichia burtonii in every Makgeolli sample. Analysis of the 16S rDNA amplicon revealed a predominance of lactic acid bacteria, and the most frequent lactic acid bacteria were Lactobacillus ingluviei, L. fermentum, and L. harbinensis, and Lactobacillus sp. Among these, L. harbinensis was detected only in R-12 and L. ingluviei was found only in R-14. Different functionalities from the individual commercially available Makgeolli may be attributed to actions of different microbial flora during fermentation.

Design of Diversity Vehicle Antennas for FM Radio Reception (FM 라디오 수신을 위한 차량용 다이버시티 안테나 설계)

  • Ahn, Seung-Beom;Noh, Young-Ho;Oh, Jung-Hoon;Choo, Ho-Sung
    • The Journal of Korean Institute of Electromagnetic Engineering and Science
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    • v.20 no.8
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    • pp.761-769
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    • 2009
  • In this paper, we report on the channel capacity and diversity gain of the vehicle on-glass antenna for FM radio reception. The correlation coefficient and channel capacity were obtained using the simulated 3D radiation pattern of each antenna and the Rayleigh channel model for urban environment. To examine the channel capacity we used two antennas which are a simple straight antenna and L-type antenna. Then we observed the available channel capacity by varying the position of feeds and the shape of the L-type antenna. The sample antenna, which has a maximum feed distance with different polarizations, was built and the receiving performance was measured in the weak FM field area. From the results we confirmed that the distance between the feeds should be placed as far as possible for the high channel capacity. If the distance between the feeds are greater than a certain threshold value than the polarizations of the two antennas are getting more important for determining the channel capacity.

Adaptive Diversity of Echinochloa Species to Osmotic Stress

  • Park, Seon-Ju;Yu, Hye-Jin;Yook, Min-Jung;Kim, Do-Soon
    • Weed & Turfgrass Science
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    • v.5 no.4
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    • pp.181-186
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    • 2016
  • Three Echinochloa species inhabit various crop fields with different soil moisture conditions. Therefore, a growthpouch test was conducted to investigate adaptive diversity of six Echinochloa species, three from Korea and three from USA, toosmotic stress by assessing shoot and root growths. Echinochloa crus-galli var. praticola showed the greatest tolerance to osmoticstress in both root ($GR_{50}=1316.3g\;PEG\;L^{-1}$) and shoot ($GR_{50}=212.2g\;PEG\;L^{-1}$) growths, while Korean E. oryzicola was mostsensitive to osmotic stress in both root ($GR_{50}=116g\;PEG\;L^{-1}$) and shoot ($GR_{50}=126.2g\;PEG\;L^{-1}$) growths. Root to shoot (R/S) ratioof Echinochloa crus-galli var. praticola increased with increasing osmotic stress, while that of Korean E. oryzicola decreased, suggestingthat R/S ratio is closely related to osmotic stress tolerance in Echinochloa species. Our results clearly demonstrate that E. crus-galli var.praticola maintains high R/S ratio even under high osmotic stress, which enables this species to well adapt to dry upland condition. Incontrast, while E. oryzicola fails to maintain sufficiently high R/S ratio, resulting in poor adaptability to dry upland condition.

Assessment on Diversity and Abundance of Butterflies in the Chunbul-dong Valley of the Soraksan by Line Transect Method (선조사법에 의한 설악산 천불동계곡 나비류의 다양성과 풍부도의 평가)

  • 권태성;박해철
    • Korean Journal of Environment and Ecology
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    • v.10 no.2
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    • pp.171-183
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    • 1997
  • Diversity, abundance, species distributions and distributions of two strategists (specialist and geceralist) of butterflies were investigated monthly from June 1996 to Oct. 1996 by line transect method in the Chunbul-dong valley from park gate to Yangpok Sanjang. The butterfly faunas of the eight regions in Kwangwon province, Gyunggi proavince and Pusan were also studied by the same method to assess diversity and abundance of butterfly community in the study region. The 18 butterfly species in 7 families were found in this study and the 48 butterfly species in 7 families were distributed in the study area from thes study and the other researches. The 30 butterfly species reported in the other studies were not found in this study and Kaniska canace L. of them would be to decrease in density. In the study area, the common species were Artogeia melete M., Neptis sappho P. and Libythea celtis F.. The representative Korean common butterflies such as Artogeia rapae L., Colias erate E. and Papillio xuthus L. were rare. The PCA(Principal Component Analysis) ordinations indicate that habitat disturbance by human would be major factor for butterfly community and species distribution. Difference was not found in diversity according to habitat disturbance. Abundance, however, was higher in the disturbed region than the undisturbed region. Compared with the other regions, abundance was greatly lower and diversity was slightly lower than that of the other regions. Two strategists exhibited different distribution patterns. Generalists were found more commonly in the disturbed region and widely distributed in both of the disturbed region and the undisturbed region than specialists.

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Lepeophtheirus tuberculatus, a New Copepod (Siphonostomatoida, Caligidae) Parasitic on the Greenlings(Pisces) from the Sea of Japan (동해의 노래미류에 기생하는 요각류 1신종, Lepeophtheirus tuberculatus)

  • 김일희
    • Animal Systematics, Evolution and Diversity
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    • v.9 no.1
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    • pp.61-67
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    • 1993
  • Lepeophtheirus tuberculatus, n. sp., is described from the greenlings Hexagrammos otakii and H. agrammus from the Sea of Japan off Mangreung, Korea. This species has been confused with L. scuttger Shiino, 1952 and L. sheni Boxshall and Bellwood, 1981. However, the new species apparently differs from the latter two species.

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Studies on the Genetic Diversity using RAPD in Leuconostoc sp. Isolated from Kimchi (김치에서 분리한 Leuconostoc속의 RAPD 법을 이용한 유전적 변이도 추론)

  • Kim, Eun-Kyung;Ryu, Chun-Sun;So, Myung-Hwan;Kim, Young-Bae
    • Korean Journal of Food Science and Technology
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    • v.29 no.5
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    • pp.1063-1066
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    • 1997
  • Thirty four Leuconostoc strains originated from kimchi were subjected to analyse their genetical similarity by using RAPD-PCR. At the 0.5 level of similarity, L. mesenteroides subsp. mesenteroides and L. mesenteroides subsp. dextranicum. formed 3 and 2 clusters, and each L. lactis and L. paramesenteroides strain was clustered in one, respectively. Every type strain tested as a control, belongs to the cluster or one of the clusters of the corresponding species or subspecies as the isolates from kimchi, respectively. However the similarity between a and b cluster was less than 0.2 and c cluster is even less similar to both of them (a and b). L. mesenteroides subsp. mesenteroides strains from kimchi have shown a varaiety of RAPD patterns in spite of morphological and physiological similarities.

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Comparative Analysis of Chloroplast Genome of Dysphania ambrosioides (L.) Mosyakin & Clemants Understanding Phylogenetic Relationship in Genus Dysphania R. Br.

  • Kim, Yongsung;Park, Jongsun;Chung, Youngjae
    • Korean Journal of Plant Resources
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    • v.32 no.6
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    • pp.644-668
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    • 2019
  • Dysphania ambrosioides (L.) Mosyakin & Clemants which belongs to Chenopodiaceae/Amaranthaceae sensu in APG system has been known as a useful plant in various fields as well as an invasive species spreading all over the world. To understand its phylogenetic relationship with neighbour species, we completed chloroplast genome of D. ambrosioides collected in Korea. Its length is 151,689 bp consisting of four sub-regions: 83,421 bp of large single copy (LSC) and 18,062 bp of small single copy (SSC) regions are separated by 25,103 bp of inverted repeat (IR) regions. 128 genes (84 protein-coding genes, eight rRNAs, and 36 tRNAs) were annotated. The overall GC content of the chloroplast genome is 36.9% and those in the LSC, SSC and IR regions are 34.9%, 30.3%, and 42.7%, respectively. Distribution of simple sequence repeats are similar to those of the other two Dysphania chloroplasts; however, different features can be utilized for population genetics. Nucleotide diversity of Dysphania chloroplast genomes 18 genes including two ribosomal RNAs contains high nucleotide diversity peaks, which may be genus or species-specific manner. Phylogenetic tree presents that D. ambrosioides occupied a basal position in genus Dysphania and phylogenetic relation of tribe level is presented clearly with complete chloroplast genomes.