• 제목/요약/키워드: in situ RT-PCR

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Analysis of Decorin Expression in the Uterine Endometrium during the Estrous Cycle and Pregnancy in Pigs

  • Choi, Yo-Han;Seo, Hee-Won;Kim, Min-Goo;Ka, Hak-Hyun
    • Reproductive and Developmental Biology
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    • 제34권2호
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    • pp.95-101
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    • 2010
  • Decorin (DCN) is a member of small leucine-rich proteoglycans which are ubiquitous components of the extracellular matrix. It regulates many physiological processes, such as matrix formation, collagen fibrillogenesis, angiogenesis, cancer growth, and cardiovascular diseases. It has been shown that DCN is expressed in the uterus during pregnancy and modulates implantation and decidualization for the establishment and maintenance of pregnancy in mice and humans. Expression of DCN in the uterine endometrium during pregnancy has not been investigated in pigs. Thus, this study investigated expression of DCN in the uterine endometrium during the estrous cycle and pregnancy in pigs. Uterine endometrial tissues were from day (D) 12 and 15 of the estrous cycle and D12, D15, D30, D60, D90, and D114 of pregnancy. Northern blot and real-time RT-PCR analyses showed that expression of DCN mRNA was detected throughout the estrous cycle and pregnancy with the highest levels during mid pregnancy. In situ hybridization analysis showed that DCN mRNA was localized to both luminal and glandular epithelia during the estrous cycle and pregnancy and also to chorionic membrane during mid pregnancy in pigs. To determine whether endometrial expression of DCN was affected by the somatic cell nuclear transfer (SCNT) procedure, DCN mRNA levels in the uterine endometrium from gilts with SCNT embryos on D30 of pregnancy were compared with those from gilts with normal embryos using real-time RT-PCR analysis. The result showed that DCN mRNA levels in the uterine endometrium were not significantly different between gilts with normal embryos and SCNT embryos. These results suggest that DCN may play an important role for endometrial tissue remodeling during mid pregnancy, and DCN expression is not affected by the SCNT procedure at the early stage of pregnancy in pigs.

Altered expression of MALAT1 lncRNA in chronic lymphocytic leukemia patients, correlation with cytogenetic findings

  • Ahmadi, Abdolrahim;Kaviani, Saeid;Yaghmaie, Marjan;Pashaiefar, Hossein;Ahmadvand, Mohammad;Jalili, Mahdi;Alimoghaddam, Kamran;Eslamijouybari, Mohammad;Ghavamzadeh, Ardeshir
    • BLOOD RESEARCH
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    • 제53권4호
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    • pp.320-324
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    • 2018
  • Background Recent studies have devoted much attention to non-protein-coding transcripts in relation to a wide range of malignancies. MALAT1, a long non-coding RNA, has been reported to be associated with cancer progression and prognosis. Thus, we here determined MALAT1 gene expression in chronic lymphocytic leukemia (CLL), a genetically heterogeneous disease, and explored its possible relationships with cytogenetic abnormalities. Methods MALAT1 expression level was evaluated using real-time quantitative reverse transcription polymerase chain reaction (qRT-PCR) on blood mononuclear cells from 30 non-treated CLL patients and 30 matched healthy controls. Cytogenetic abnormalities were determined in patients by fluorescence in situ hybridization (FISH). Results MALAT1 expression level was up-regulated in the CLL group compared to healthy controls (P=0.008). Del13q14, followed by Del11q22, were the most prevalent cytogenetic abnormalities. We found no association between the FISH results and MALAT1 expression in patients. Conclusion Altered expression of MALAT1 is associated with CLL development. Further investigations are required to assess the relationship between this long non-coding RNA and CLL patient survival and prognosis.

Mediation of $N-methyl-_D-aspartate$ on Neuropeptide Y Expression Induced by Morphine in Mouse Cerebellum

  • Kwon, Gee-Youn;Kim, Soo-Kyung
    • The Korean Journal of Physiology and Pharmacology
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    • 제5권6호
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    • pp.479-485
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    • 2001
  • The existence of opioid receptors in mammalian cerebellum except human, has not been clearly understood. In the present study, we found that NPY was inducible by morphine in the mouse cerebellar granular and Purkinje cell layers. We performed in situ RT-PCR and immunohistochemistry to characterize the NPY expression. The increase of NPY gene expression by morphine (30 mg/kg, i.p.) was inhibited by pretreatment with not only naloxone (100 mg/kg, i.p.) but also a noncompetitive NMDA antagonist, MK-801 (0.3 mg/kg, i.p.). The competitive NMDA antagonist, AP-5 (0.9 mg/kg, i.p.) slightly attenuated the increased NPY expression by morphine. Also, the finding similar to morphine was shown by NMDA (70 mg/kg, i.p.) treatment. Our results indicate that NPY was inducible by morphine and this might reflect activation of NMDA receptors in granule cells that relay mossy fiber inputs to Purkinje cells via parallel fibers.

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Novel Whitening Agent: Phytoclear-EL1

  • Chang, Yun-Hee;Lee, Sang-hwa;Kang, Sang-Jin
    • 대한화장품학회지
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    • 제27권1호
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    • pp.111-118
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    • 2001
  • A novel melanogenic inhibitory compound, Phytoclear-EL1 (5,10-diacetyl-3-benzoyllathyrol) was isolated from Euphorbiae lathyridis. The effects of EL1 on culture normal human melanocytes (NHM) were assessed. EL1 reduced the melanin synthesis of NHM by 40% at a concentration of 2 $\square$g/ml without any apparent cytotoxicity. We also have found that the treatment of the cells with EL1 decreased the tyrosinase activity by 29% in situ. To elucidate the action mechanism of EL1, we investigated the changes in mRNA levels of tyrosinase, TRP-1 and TRP-2 using RT-PCR technique. AS a result, the mRNA levels of tyrosinase, TRP-1 and TRP-2 were markedly reduced by EL1 treatment. These results suggest that Phytoclear-EL1 is a novel whitening agent that is effective in human melanocytes.

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방사선 스트레스 반응 방어 유전자의 탐색 및 발현 분석 (Expression profile of defense-related genes in response to gamma radiation stress)

  • 박누리;하혜정;사미나단 수브라야;최서희;전용삼;진용태;도옥화;쉬프라 쿠마리;이긍주
    • Journal of Plant Biotechnology
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    • 제43권3호
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    • pp.359-366
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    • 2016
  • 자주달개비는 닭의장풀과의 다년생 식물로, 자주달개비의 수술털은 이온화 방사선에 노출될 경우 분홍색 또는 흰색으로 체세포 돌연변이가 쉽게 일어나 방사선 지표식물로 생물학적인 반응 연구 등에 효과적으로 이용되어 왔다. 본 연구에서는, 자주달개비 BNL 4430을 대상으로 50, 250, 500, 1000 mGy에 해당하는 감마선($^{60}Co$)을 조사한 후 13일차에 있는 샘플을 대상으로 만개한 꽃을 채취하여 RNA를 추출하였다. 추출한 RNA를 바탕으로 Illumina Hi-seq를 이용하여 각 선량에 해당하는 전사체 및 특이발현유전자(Differentially expressed genes, DEGs)를 분석하였다. 전사체는 총 77,326개로, 방사선 비처리구에 비해 2배 이상 상향 발현된 유전자는 50 mGy에서 116개, 250 mGy에서 222개, 500 mGy에서 246개, 1000 mGy에서 308개로 밝혀졌으며, 이 중 각 선량별 특이적으로 반응하는 유전자인 heat shock protein 70 famaily protein, IQ-domain 6, KAR-UP oxidoreductase, zinc transporter 1 precursor를 선발하여 13일차의 RNA 샘플을 대상으로 RT-PCR 및 qRT-PCR을 이용하여 저선량 방사선에 반응하는 유전자를 검정하였다. 검정 결과 DEGs data와 매우 유사한 양상을 보였으며, 선량별로 2.3배에서 최대 96.59배의 높은 발현을 확인하였다. 선발한 유전자는 대부분 세포 내 방어기작과 관련이 되어있는 유전자였으며, 이중 KAR-UP oxidoreductase의 경우 A. thaliana에서 발아와 관련이 있는 유전자로 알려져 있었는데, 이번 연구를 통해 저선량 방사선에 의해서 반응하는 유전자로도 확인이 되었다. 저선량 방사선에 노출된 자주달개비의 유전자 정보를 바탕으로, 저선량의 방사선이 식물체에 미치는 영향과 발현 기작을 연구하는 데에 분자적 수준의 정보를 제공할 수 있게 되었으며, 저선량 방사선의 생물학적 안정성 확보를 위한 감시 보조수단으로 자주달개비가 유용하게 활용될 수 있을 것으로 기대된다.

쥐의 초기 난포 발달에 관여하는 Cell Size Growth 및 CCN Family 유전자에 관한 연구 (Characterization of Genes Related to the Cell Size Growth and CCN Family According to the Early Folliculogenesis in the Mouse)

  • 김경화;박창은;윤세진;이경아
    • Clinical and Experimental Reproductive Medicine
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    • 제32권3호
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    • pp.269-277
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    • 2005
  • Objectives: Previously, we sought to compile a list of genes expressed during early folliculogenesis by using cDNA microarray to investigate follicular gene expression and changes during primordialprimary follicle transition and development of secondary follicles (Yoon et al., 2005). Among those genes, a group of genes related to the cell size growth was characterized during the ovarian development in the present study. Methods: We determined ovarian expression pattern of six genes related to the cell size growth (cyr61, emp1, fhl1, socs2, wig1 and wisp1) and extended into CCN family (${\underline{c}}onnective$ tissue growth factor/${\underline{c}}ysteine$-rich 61/${\underline{n}}ephroblastoma$-overexpressed), ctgf, nov, wisp2, wisp3, including cyr61 and wisp1 genes. Expression of mRNA and protein according to the ovarian developmental stage was evaluated by in situ hybridization, and/or semiquantitative reverse transcriptase polymerase chain reaction (RT-PCR), and immunohistochemistry, respectively. Results: Among 6 genes related to the cell size growth, cyr61 and wisp1 mRNA was detected only in oocytes in the postnatal day5 mouse ovaries. cyr61 mRNA expression was limited to the nucleolus of oocytes, while wisp1 was expressed in the cytoplasm and nucleolus of oocytes, except nucleus. cyr61 mRNA expression, however, was found in granulosa cells from secondary follicles. The rest 4 genes in the cell size growth group were detected in oocytes, granulosa and theca cells. Cyr61 and Wisp1 proteins were expressed in the oocyte cytoplasm from primordial follicle stage. Especially, Cyr61 protein was detected in pre-granulosa cells, Wisp1 protein was not. By using RT-PCR, we evaluated and decided that Cyr61 protein is produced by their own mRNA in pre-granulosa cells that was not detected by in situ hybridization. cyr61 and wisp1 genes are happen to be the CCN family members. The other members of CCN family were also studied, but their expression was detected in oocytes, granulose and theca cells. Conclusions: We firstly characterized the ovarian expression of genes related to the cell size growth and CCN family according to the early folliculogenesis. Cyr61 protein expression in the pre-granulosa cells is profound in meaning. Further functional analysis for cyr61 in early folliculogenesis is under investigation.

EST Clustering 방법으로 동정한 새로운 유전자의 생쥐 난소 및 정소에서의 발현 (Identification of a Novel Gene by EST Clustering and its Expression in Mouse Ovary and Testis)

  • 황상준;박창은;황규찬;이경아
    • Clinical and Experimental Reproductive Medicine
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    • 제33권4호
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    • pp.253-263
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    • 2006
  • 목 적: 본 연구에서는 EST Clustering 방법을 이용하여 이전의 연구에서 발굴한 B357 EST의 염기서열을 포함하는 유전자를 동정하고, 이 유전자의 발현을 생쥐의 난소와 정소를 포함한 여러 가지 조직들에서 살펴보고자 하였다. 연구방법: EST Clustering으로 얻어진 전체 염기서열을 5-day-ovary-specific gene-1 (5DOS1)이라고 명명하여 GenBank에 등록하였으며 (AY751521), northern blotting, real-time RT-PCR, in situ hybridization, western blotting, immunohistochemistry 등의 방법을 이용하여 생쥐 난소와 고환의 발달단계에 따라 그 발현양상을 관찰하였다. 결 과: 5DOS1의 전사체는 성장한 정소, 뇌, 근육에서 높게 발현하였으며, 난소의 경우에서는 원시난포시기부터 모든 난자에서 발현하였으며 특히 생후 5일째 높게 발현하였고 그 이후로는 점차 감소하였다. 반면 정소의 경우는 발달과 함께 계속 증가하였으며, 정모세포를 제외한 모든 발달단계별 정자에서 발현함을 관찰하였다. 결 론: 본 연구결과는 5DOS1에 대한 발견과 동정에 대한 첫 보고로써, 유전자 및 단백질이 생쥐의 난소 및 정소의 생식세포에서 발현하는 것을 관찰하였다. 앞으로 생식세포 발생 및 분화에 관련된 5DOS1의 기능에 대한 심층 연구가 더 필요하다고 사료된다.

법랑모세포 분화와 법랑질 형성과정에서 OD314, Apin protein의 발현 및 기능 (EXPRESSION AND FUNCTION OF OD314, APIN PROTEIN, DURING AMELOBLAST DIFFERENTIATION AND AMELOGENESIS)

  • 박종태;최용석;김흥중;정문진;오현주;신인철;박주철;손호현
    • Restorative Dentistry and Endodontics
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    • 제31권6호
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    • pp.437-444
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    • 2006
  • 본 연구에서는 법랑모세포 분화와 법랑질 형성에 연관이 있는 OD314 일명 Apin protein의 기능을 밝힐 목적으로, in-situ hybridization에 의한 OD314 mRNA 발현과 법랑모세포 세포주에서 OD314와 enamel matrix protein의 발현, 그리고 OD314 유전자를 과발현/억제시킬 수 있는 construct를 제작한 후 법랑질 형성 중에 OD314의 기능을 알아보고자 RT-PCR를 시행하여 다음과 같은 결과를 얻었다. 1. OD314 mRNA는 발생중인 상아모세포보다 법랑모세포에서 강하게 발현되었다. 2. Tuftelin은 석회화 결정이 형성되는 14일까지 발현이 지속되고, 그 이후부터 점차 감소하였다. Amelogenin과 enamelin은 7일부터 그 발현이 점점 감소하였다. 3. U6-OD314 siRNA construct를 이용하여 transfection한 법랑모세포 세포주는 OD314와 tuftelin, MMP20 mRNA 발현이 감소하였으며, CMV-OD3l4를 transfection하여 OD314의 과발현을 유도한 경우에는 OD3l4와 MMP20 mRNA의 발현이 뚜렷이 증대되었다. 이 결과는 OD314가 법랑모세포의 분화와 법랑질의 형성 그리고 석회화 과정에 중요한 역할을 하는 새로운 인자임을 시사한다.

흰쥐 태반에서의 $Mel_{la}$ 유전자 발현과 멜라토닌이 PLP-A 유전자 발현에 미치는 영향 (Local Expression of $Mel_{la}$ and Effect of Melatonin on Expression of PLP-A Gene in the Rat Placenta)

  • Shin, Chang-Sook;Lee, Chae-Kwan;Kang, Han-Seung;Kim, Haekwon;Yoon, Yong-Dal;Moon, Deog-Hwan;Kang, Sung-Goo
    • 한국발생생물학회지:발생과생식
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    • 제5권2호
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    • pp.181-187
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    • 2001
  • 포유동물의 혈중 프로락틴 농도는 일주기와 연주기의 변화를 나타내며 송과체에서 분비되는 멜라토닌이 조절인자로 관여한다. 인위적인 송과체의 기능 억제는 혈중 프로락틴 농도를 증가시킨다. 임신 후반기에 태반에서는 수종의 프로락틴군 호르몬들이 분비되어 태반기능 및 배아발생에 중요한 역할을 한다. 그러나 이들 호르몬 유전자들의 발현 조절기작과 조절 인자들에 관한 연구 결과는 미비하다. 본 연구에서는 RT-PCR과, in situ hybridization 방법으로 흰쥐의 태반에서 Me $l_{la}$ 유전자의 발현을 확인하였다. 발현되는 주요 세포는 junctional zone과 labyrinth zone의 spongiotrophoblast 세포와 trophoblast giant세포였다. 특이한 것은junctional zone의 Me $l_{la}$ 유전자의 발현이 밤시간(22:00)에 비하여 낮시간(16:00)에 높게 조사되었다. 그리고 멜라토닌 수용체 agonist인 chloromelatonin은 PLP-A 유전자의 발현을 억제하였다. 이러한 결과들로 보아 흰쥐의 태반에서 Me $l_{la}$ 유전자가 발현되며, 멜라토닌에 의해 유도되는 Me $l_{la}$ 의 활성화는 PLP-A유전자의 발현에 중요한 조절인자로 작용할 것이다.

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Molecular characterization and expression pattern of a novel Keratin-associated protein 11.1 gene in the Liaoning cashmere goat (Capra hircus)

  • Jin, Mei;Cao, Qian;Wang, Ruilong;Piao, Jun;Zhao, Fengqin;Piao, Jing'ai
    • Asian-Australasian Journal of Animal Sciences
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    • 제30권3호
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    • pp.328-337
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    • 2017
  • Objective: An experiment was conducted to determine the relationship between the KAP11.1 and the regulation wool fineness. Methods: In previous work, we constructed a skin cDNA library and isolated a full-length cDNA clone termed KAP11.1. On this basis, we conducted a series of bioinformatics analysis. Tissue distribution of KAP11.1 mRNA was performed using semi-quantitative reverse transcription polymerase chain reaction (RT-PCR) analysis. The expression of KAP11.1 mRNA in primary and secondary hair follicles was performed using real-time PCR (real-time polymerase chain reaction) analysis. The expression location of KAP11.1 mRNA in primary and secondary hair follicles was performed using in situ hybridization. Results: Bioinformatics analysis showed that KAP11.1 gene encodes a putative 158 amino acid protein that exhibited a high content of cysteine, serine, threonine, and valine and has a pubertal mammary gland) structural domain. Secondary structure prediction revealed a high proportion of random coils (76.73%). Semi-quantitative RT-PCR showed that KAP11.1 gene was expressed in heart, skin, and liver, but not expressed in spleen, lung and kidney. Real time PCR results showed that the expression of KAP11.1 has a higher expression in catagen than in anagen in the primary hair follicles. However, in the secondary hair follicles, KAP11.1 has a significantly higher expression in anagen than in catagen. Moreover, KAP11.1 gene has a strong expression in inner root sheath, hair matrix, and a lower expression in hair bulb. Conclusion: We conclude that KAP11.1 gene may play an important role in regulating the fiber diameter.