• Title/Summary/Keyword: hierarchical analysis

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Program Development of Integrated Expression Profile Analysis System for DNA Chip Data Analysis (DNA칩 데이터 분석을 위한 유전자발연 통합분석 프로그램의 개발)

  • 양영렬;허철구
    • KSBB Journal
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    • v.16 no.4
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    • pp.381-388
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    • 2001
  • A program for integrated gene expression profile analysis such as hierarchical clustering, K-means, fuzzy c-means, self-organizing map(SOM), principal component analysis(PCA), and singular value decomposition(SVD) was made for DNA chip data anlysis by using Matlab. It also contained the normalization method of gene expression input data. The integrated data anlysis program could be effectively used in DNA chip data analysis and help researchers to get more comprehensive analysis view on gene expression data of their own.

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An Agglomerative Hierarchical Variable-Clustering Method Based on a Correlation Matrix

  • Lee, Kwangjin
    • Communications for Statistical Applications and Methods
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    • v.10 no.2
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    • pp.387-397
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    • 2003
  • Generally, most of researches that need a variable-clustering process use an exploratory factor analysis technique or a divisive hierarchical variable-clustering method based on a correlation matrix. And some researchers apply a object-clustering method to a distance matrix transformed from a correlation matrix, though this approach is known to be improper. On this paper an agglomerative hierarchical variable-clustering method based on a correlation matrix itself is suggested. It is derived from a geometric concept by using variate-spaces and a characterizing variate.

Hierarchical Bayes Estimators of the Error Variance in Balanced Fixed-Effects Two-Way ANOVA Models

  • Kim, Byung-Hwee;Dong, Kyung-Hwa
    • Communications for Statistical Applications and Methods
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    • v.6 no.2
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    • pp.487-500
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    • 1999
  • We propose a class of hierarchical Bayes estimators of the error variance under the relative squared error loss in balanced fixed-effects two-way analysis of variance models. Also we provide analytic expressions for the risk improvement of the hierarchical Bayes estimators over multiples of the error sum of squares. Using these expressions we identify a subclass of the hierarchical Bayes estimators each member of which dominates the best multiple of the error sum of squares which is known to be minimax. Numerical values of the percentage risk improvement are given in some special cases.

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A Soccer Video Analysis Using Product Hierarchical Hidden Markov Model (PHHMM(Product Hierarchical Hidden Markov Model)을 이용한 축구 비디오 분석)

  • Kim, Moo-Sung;Kang, Hang-Bong
    • Proceedings of the IEEK Conference
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    • 2006.06a
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    • pp.681-682
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    • 2006
  • 일반적으로 축구 비디오 데이터는 멀티모달과 멀티레이어 속성을 지닌다. 이러한 데이터를 다루기 적합한 모델은 동적 베이지안 네트워크(Dynamic Bayesian Network: DBN) 형태의 위계적 은닉 마르코프 모델(Hierarchical Hidden Markov Model: HHMM)이다. 이러한 HHMM 중 다중속성의 특징들이 서로 상호작용하는 PHHMM(Product Hierarchical Hidden Markov Model)이 있다. 본 논문에서는 PHHMM 을 축구 경기의 Play/Break 이벤트 검색 및 분석에 적용하였고 바람직한 결과를 얻었다.

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An Application of Cognitive Task Analysis for the Evaluation of Human Performance on Inspection Tasks (인지적 작업분석에 의한 검사작업의 인간 수행도 분석)

  • Lee, Sang-Do;Kwack, Hyo-Yean
    • Journal of Korean Society for Quality Management
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    • v.23 no.3
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    • pp.69-83
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    • 1995
  • In a large number of literature on of inspection tasks, one of the most consistent findings is the existence of large and consistent differences among inspectors. It is possible that the individual difference is described by the difference of cognitive skills, because cognitive skills are required more than manual skills in inspection tasks. Therefore, a set of cognitive factors in human information processing may underly human performance in inspection tasks. In this study, a cognitive skill was described as the relative importance of the cognitive factors involved. A hierarchical task analysis and a fuzzy hierarchical analysis were used to represent how the importance of cognitive factors contribute to inspection performance. An experiment was conducted using the computer simulations of PCB inspection tasks. The results revealed that the subject group with better performance showed the importance weights of cognitive factors in the following rank; (attention, perception, judgement, classification, recognition)<(detection)$\ll$(memory). The results of the experiment can serve as a selection criterion for efficient inspection performance and the information of skilled learning for an inspection training program. The usefullness of a hierarchical task analysis and a fuzzy hierarchical task analysis for the analysis of cognitive tasks are also confirmed.

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HisCoM-GGI: Software for Hierarchical Structural Component Analysis of Gene-Gene Interactions

  • Choi, Sungkyoung;Lee, Sungyoung;Park, Taesung
    • Genomics & Informatics
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    • v.16 no.4
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    • pp.38.1-38.3
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    • 2018
  • Gene-gene interaction (GGI) analysis is known to play an important role in explaining missing heritability. Many previous studies have already proposed software to analyze GGI, but most methods focus on a binary phenotype in a case-control design. In this study, we developed "Hierarchical structural CoMponent analysis of Gene-Gene Interactions" (HisCoM-GGI) software for GGI analysis with a continuous phenotype. The HisCoM-GGI method considers hierarchical structural relationships between genes and single nucleotide polymorphisms (SNPs), enabling both gene-level and SNP-level interaction analysis in a single model. Furthermore, this software accepts various types of genomic data and supports data management and multithreading to improve the efficiency of genome-wide association study data analysis. We expect that HisCoM-GGI software will provide advanced accessibility to researchers in genetic interaction studies and a more effective way to understand biological mechanisms of complex diseases.

Transmission Performance Analysis for Terrestrial Digital Broadcast Systems According to Hierarchical Modulation Factor(α) (계층변조 지수(α)에 따른 지상파 디지털 방송 시스템의 전송성능 분석)

  • Lee, Sungyoon;Kim, Jae-Kil;Lee, Jewon;Yun, Seonhui;Ahn, Jae Min
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.37A no.9
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    • pp.728-737
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    • 2012
  • An analytical method for identifying terrestrial broadcasting coverages is proposed for a terrestrial broadcasting transmission system adopting a hierarchical modulation technique. Bit Error Rates(BERs) are derived for hierarchically modulated non-uniform QAM constellations based on the Q-function analysis in AWGN environments. The derived BERs depend on the hierarchical modulation factor ${\alpha}$(HMF) and could be mapped to the broadcasting coverages according to the link budget analysis based on the log-distance path loss model. Finally the broadcasting coverage ratios for high priority(HP) streams and low priority(LP) streams are calculated and presented for the determination of the HMF.

Symbolic Cluster Analysis for Distribution Valued Dissimilarity

  • Matsui, Yusuke;Minami, Hiroyuki;Misuta, Masahiro
    • Communications for Statistical Applications and Methods
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    • v.21 no.3
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    • pp.225-234
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    • 2014
  • We propose a novel hierarchical clustering for distribution valued dissimilarities. Analysis of large and complex data has attracted significant interest. Symbolic Data Analysis (SDA) was proposed by Diday in 1980's, which provides a new framework for statistical analysis. In SDA, we analyze an object with internal variation, including an interval, a histogram and a distribution, called a symbolic object. In the study, we focus on a cluster analysis for distribution valued dissimilarities, one of the symbolic objects. A hierarchical clustering has two steps in general: find out step and update step. In the find out step, we find the nearest pair of clusters. We extend it for distribution valued dissimilarities, introducing a measure on their order relations. In the update step, dissimilarities between clusters are redefined by mixture of distributions with a mixing ratio. We show an actual example of the proposed method and a simulation study.

Results of Discriminant Analysis with Respect to Cluster Analyses Under Dimensional Reduction

  • Chae, Seong-San
    • Communications for Statistical Applications and Methods
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    • v.9 no.2
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    • pp.543-553
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    • 2002
  • Principal component analysis is applied to reduce p-dimensions into q-dimensions ( $q {\leq} p$). Any partition of a collection of data points with p and q variables generated by the application of six hierarchical clustering methods is re-classified by discriminant analysis. From the application of discriminant analysis through each hierarchical clustering method, correct classification ratios are obtained. The results illustrate which method is more reasonable in exploratory data analysis.

Performability Analysis of Token Ring Networks using Hierarchical Modeling

  • Ro, Cheul-Woo;Park, Artem
    • International Journal of Contents
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    • v.5 no.4
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    • pp.88-93
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    • 2009
  • It is important for communication networks to possess the capability to overcome failures and provide survivable services. We address modeling and analysis of performability affected by both performance and availability of system components for a token ring network under failure and repair conditions. Stochastic reward nets (SRN) is an extension of stochastic Petri nets and provides compact modeling facilities for system analysis. In this paper, hierarchical SRN modeling techniques are used to overcome state largeness problem. The upper level model is used to compute availability and the lower level model captures the performance. And Normalized Throughput Loss (NTL) is obtained for the composite ring network for each node failures occurrence as a performability measure. One of the key contributions of this paper constitutes the Petri nets modeling techniques instead of complicate numerical analysis of Markov chains and easy way of performability analysis for a token ring network under SRN reward concepts.